RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 KBTBD4Q9NVX7 518 aa21.98■■□□□ 1.11
SRSF1-206ENST00000583741 MAGED2Q9UNF1 606 aaPredicted RBP21.98■■□□□ 1.11
SRSF1-206ENST00000583741 ANAPC1Q9H1A4 1944 aa21.98■■□□□ 1.11
SRSF1-206ENST00000583741 DDX6P26196 483 aaKnown RBP eCLIP21.97■■□□□ 1.11
SRSF1-206ENST00000583741 ADSSP30520 456 aa21.97■■□□□ 1.11
SRSF1-206ENST00000583741 WNT7BP56706 349 aa21.97■■□□□ 1.11
SRSF1-206ENST00000583741 ZNF445P59923 1031 aa21.97■■□□□ 1.11
SRSF1-206ENST00000583741 SV2CQ496J9 727 aa21.97■■□□□ 1.11
SRSF1-206ENST00000583741 STPG1Q5TH74 334 aa21.97■■□□□ 1.11
SRSF1-206ENST00000583741 SLFN12LQ6IEE8 588 aa21.97■■□□□ 1.11
SRSF1-206ENST00000583741 MON1AQ86VX9 555 aa21.97■■□□□ 1.11
SRSF1-206ENST00000583741 EZH1Q92800 747 aaPredicted RBP21.97■■□□□ 1.11
SRSF1-206ENST00000583741 ST6GALNAC4Q9H4F1 302 aa21.97■■□□□ 1.11
SRSF1-206ENST00000583741 KIAA1468Q9P260 1216 aa21.97■■□□□ 1.11
SRSF1-206ENST00000583741 ANGPTL2Q9UKU9 493 aa21.97■■□□□ 1.11
SRSF1-206ENST00000583741 AKAP3O75969 853 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 PRR29P0C7W0 189 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 ABCD1P33897 745 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 MPLP40238 635 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 GALK1P51570 392 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 CCDC142Q17RM4 750 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 SCARA3Q6AZY7 606 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 TCEAL6Q6IPX3 200 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 CC2D1AQ6P1N0 951 aaPredicted RBP21.96■■□□□ 1.11
SRSF1-206ENST00000583741 SV2BQ7L1I2 683 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 PDCL2Q8N4E4 241 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 MRPS31Q92665 395 aaKnown RBP21.96■■□□□ 1.11
SRSF1-206ENST00000583741 TCEAL3Q969E4 200 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 ZC3H10Q96K80 434 aaKnown RBP21.96■■□□□ 1.11
SRSF1-206ENST00000583741 WDFY3Q8IZQ1 3526 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 ZZEF1O43149 2961 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 GJA4P35212 333 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 AMPD3Q01432 767 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 TSPY1Q01534 308 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 ZNF268Q14587 947 aaPredicted RBP21.96■■□□□ 1.11
SRSF1-206ENST00000583741 PLK5Q496M5 336 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 SFR1Q86XK3 245 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 CAMKK1Q8N5S9 505 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 ZSWIM2Q8NEG5 633 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 POMGNT1Q8WZA1 660 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 FAM84AQ96KN4 292 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 ZNF560Q96MR9 790 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 SLC22A12Q96S37 553 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 P2RY13Q9BPV8 354 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 L1RE1Q9UN81 338 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 PCDHGA5Q9Y5G8 931 aa21.96■■□□□ 1.11
SRSF1-206ENST00000583741 HELZP42694 1942 aaKnown RBP21.95■■□□□ 1.1
SRSF1-206ENST00000583741 PPP1R37O75864 691 aa21.95■■□□□ 1.1
SRSF1-206ENST00000583741 MYL1P05976 194 aa21.95■■□□□ 1.1
SRSF1-206ENST00000583741 CSH1P0DML2 217 aa21.95■■□□□ 1.1
SRSF1-206ENST00000583741 CSH2P0DML3 217 aa21.95■■□□□ 1.1
SRSF1-206ENST00000583741 DRD1P21728 446 aa21.95■■□□□ 1.1
SRSF1-206ENST00000583741 ACAT1P24752 427 aaKnown RBP21.95■■□□□ 1.1
SRSF1-206ENST00000583741 CYP2F1P24903 491 aa21.95■■□□□ 1.1
SRSF1-206ENST00000583741 POU5F1Q01860 360 aaKnown RBP21.95■■□□□ 1.1
SRSF1-206ENST00000583741 MTF1Q14872 753 aa21.95■■□□□ 1.1
SRSF1-206ENST00000583741 PDGFRLQ15198 375 aa21.95■■□□□ 1.1
SRSF1-206ENST00000583741 DDR2Q16832 855 aa21.95■■□□□ 1.1
SRSF1-206ENST00000583741 SASS6Q6UVJ0 657 aa21.95■■□□□ 1.1
SRSF1-206ENST00000583741 LRSAM1Q6UWE0 723 aa21.95■■□□□ 1.1
SRSF1-206ENST00000583741 ZNF720Q7Z2F6 126 aa21.95■■□□□ 1.1
SRSF1-206ENST00000583741 RPLP0P6Q8NHW5 317 aa21.95■■□□□ 1.1
SRSF1-206ENST00000583741 PCDHA5Q9Y5H7 936 aa21.95■■□□□ 1.1
SRSF1-206ENST00000583741 NUP205Q92621 2012 aa21.94■■□□□ 1.1
SRSF1-206ENST00000583741 SOBPA7XYQ1 873 aa21.94■■□□□ 1.1
SRSF1-206ENST00000583741 DCLK1O15075 740 aa21.94■■□□□ 1.1
SRSF1-206ENST00000583741 NOL4O94818 638 aa21.94■■□□□ 1.1
SRSF1-206ENST00000583741 IL18RAPO95256 599 aa21.94■■□□□ 1.1
SRSF1-206ENST00000583741 SMC2O95347 1197 aa21.94■■□□□ 1.1
SRSF1-206ENST00000583741 POLR2BP30876 1174 aaKnown RBP21.94■■□□□ 1.1
SRSF1-206ENST00000583741 AMPD2Q01433 879 aa21.94■■□□□ 1.1
SRSF1-206ENST00000583741 KCNA1Q09470 495 aa21.94■■□□□ 1.1
SRSF1-206ENST00000583741 ZNF77Q15935 545 aa21.94■■□□□ 1.1
SRSF1-206ENST00000583741 NFE2Q16621 373 aaPredicted RBP21.94■■□□□ 1.1
SRSF1-206ENST00000583741 SMARCE1Q969G3 411 aa21.94■■□□□ 1.1
SRSF1-206ENST00000583741 CYP2S1Q96SQ9 504 aa21.94■■□□□ 1.1
SRSF1-206ENST00000583741 PKMYT1Q99640 499 aa21.94■■□□□ 1.1
SRSF1-206ENST00000583741 LRRC27Q9C0I9 530 aa21.94■■□□□ 1.1
SRSF1-206ENST00000583741 DUSP15Q9H1R2 295 aaPredicted RBP21.94■■□□□ 1.1
SRSF1-206ENST00000583741 ECT2Q9H8V3 914 aa21.94■■□□□ 1.1
SRSF1-206ENST00000583741 HCRTO43612 131 aa21.93■■□□□ 1.1
SRSF1-206ENST00000583741 ITGB3P05106 788 aa21.93■■□□□ 1.1
SRSF1-206ENST00000583741 CASP1P29466 404 aa21.93■■□□□ 1.1
SRSF1-206ENST00000583741 PNPLA4P41247 253 aa21.93■■□□□ 1.1
SRSF1-206ENST00000583741 SHC2P98077 582 aa21.93■■□□□ 1.1
SRSF1-206ENST00000583741 TFAMQ00059 246 aaKnown RBP21.93■■□□□ 1.1
SRSF1-206ENST00000583741 DPYDQ12882 1025 aa21.93■■□□□ 1.1
SRSF1-206ENST00000583741 CUL4BQ13620 913 aa21.93■■□□□ 1.1
SRSF1-206ENST00000583741 INTS6LQ5JSJ4 861 aaKnown RBP21.93■■□□□ 1.1
SRSF1-206ENST00000583741 DYMQ7RTS9 669 aa21.93■■□□□ 1.1
SRSF1-206ENST00000583741 NT5DC4Q86YG4 428 aa21.93■■□□□ 1.1
SRSF1-206ENST00000583741 C1orf127Q8N9H9 656 aa21.93■■□□□ 1.1
SRSF1-206ENST00000583741 TTC16Q8NEE8 873 aa21.93■■□□□ 1.1
SRSF1-206ENST00000583741 TRMT2BQ96GJ1 504 aaKnown RBP21.93■■□□□ 1.1
SRSF1-206ENST00000583741 ACBD6Q9BR61 282 aa21.93■■□□□ 1.1
SRSF1-206ENST00000583741 FAM213AQ9BRX8 229 aa21.93■■□□□ 1.1
SRSF1-206ENST00000583741 STRA6Q9BX79 667 aa21.93■■□□□ 1.1
SRSF1-206ENST00000583741 BLZF1Q9H2G9 400 aa21.93■■□□□ 1.1
SRSF1-206ENST00000583741 TRPC7Q9HCX4 862 aa21.93■■□□□ 1.1
SRSF1-206ENST00000583741 VPS45Q9NRW7 570 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms