RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 NR5A1Q13285 461 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 ZBTB6Q15916 424 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 BTBD8Q5XKL5 378 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 TMEM150AQ86TG1 271 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 TRIML1Q8N9V2 468 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 OR10T2Q8NGX3 314 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 PIP4K2CQ8TBX8 421 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 BAP1Q92560 729 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 YTHDC1Q96MU7 727 aaKnown RBP11.99□□□□□ -0.49
CASC3-208ENST00000583649 PCOLCE2Q9UKZ9 415 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 ARHGAP26Q9UNA1 814 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 DNM3Q9UQ16 869 aa11.99□□□□□ -0.49
CASC3-208ENST00000583649 TRIP11Q15643 1979 aa11.98□□□□□ -0.49
CASC3-208ENST00000583649 SGK1O00141 431 aa11.98□□□□□ -0.49
CASC3-208ENST00000583649 CYB561D2O14569 222 aa11.98□□□□□ -0.49
CASC3-208ENST00000583649 SCP2P22307 547 aa11.98□□□□□ -0.49
CASC3-208ENST00000583649 MCM7P33993 719 aa11.98□□□□□ -0.49
CASC3-208ENST00000583649 OPRD1P41143 372 aa11.98□□□□□ -0.49
CASC3-208ENST00000583649 ORC2Q13416 577 aaPredicted RBP11.98□□□□□ -0.49
CASC3-208ENST00000583649 TOB2Q14106 344 aaPredicted RBP11.98□□□□□ -0.49
CASC3-208ENST00000583649 SEZ6Q53EL9 994 aa11.98□□□□□ -0.49
CASC3-208ENST00000583649 EARS2Q5JPH6 523 aaKnown RBP11.98□□□□□ -0.49
CASC3-208ENST00000583649 SPATA1Q5VX52 437 aa11.98□□□□□ -0.49
CASC3-208ENST00000583649 DEFB119Q8N690 84 aa11.98□□□□□ -0.49
CASC3-208ENST00000583649 FAM212AQ96EL1 285 aa11.98□□□□□ -0.49
CASC3-208ENST00000583649 MYRFLQ96LU7 910 aa11.98□□□□□ -0.49
CASC3-208ENST00000583649 HSPA12BQ96MM6 686 aa11.98□□□□□ -0.49
CASC3-208ENST00000583649 ABCB6Q9NP58 842 aa11.98□□□□□ -0.49
CASC3-208ENST00000583649 ARHGEF4Q9NR80 690 aa11.98□□□□□ -0.49
CASC3-208ENST00000583649 ORC3Q9UBD5 711 aaPredicted RBP11.98□□□□□ -0.49
CASC3-208ENST00000583649 KIAA1024Q9UPX6 916 aa11.98□□□□□ -0.49
CASC3-208ENST00000583649 CITO14578 2027 aa11.98□□□□□ -0.49
CASC3-208ENST00000583649 HELZ2Q9BYK8 2649 aaKnown RBP11.97□□□□□ -0.49
CASC3-208ENST00000583649 TEX51A0A1B0GUA7 166 aa11.97□□□□□ -0.49
CASC3-208ENST00000583649 TBC1D3BA6NDS4 549 aa11.97□□□□□ -0.49
CASC3-208ENST00000583649 SLC16A4O15374 487 aa11.97□□□□□ -0.49
CASC3-208ENST00000583649 FLRT2O43155 660 aa11.97□□□□□ -0.49
CASC3-208ENST00000583649 HIP1RO75146 1068 aa11.97□□□□□ -0.49
CASC3-208ENST00000583649 NOL4O94818 638 aa11.97□□□□□ -0.49
CASC3-208ENST00000583649 ZNF883P0CG24 379 aa11.97□□□□□ -0.49
CASC3-208ENST00000583649 TAF6P49848 677 aa11.97□□□□□ -0.49
CASC3-208ENST00000583649 SAFBQ15424 915 aaKnown RBP eCLIP11.97□□□□□ -0.49
CASC3-208ENST00000583649 C9orf57Q5W0N0 161 aa11.97□□□□□ -0.49
CASC3-208ENST00000583649 DDX42Q86XP3 938 aaKnown RBP eCLIP11.97□□□□□ -0.49
CASC3-208ENST00000583649 FRMD1Q8N878 549 aa11.97□□□□□ -0.49
CASC3-208ENST00000583649 ARL14EPQ8N8R7 260 aaPredicted RBP11.97□□□□□ -0.49
CASC3-208ENST00000583649 OR2I1PQ8NGU4 316 aa11.97□□□□□ -0.49
CASC3-208ENST00000583649 RHBDD1Q8TEB9 315 aa11.97□□□□□ -0.49
CASC3-208ENST00000583649 NXPE2Q96DL1 559 aa11.97□□□□□ -0.49
CASC3-208ENST00000583649 ZBTB45Q96K62 511 aaPredicted RBP11.97□□□□□ -0.49
CASC3-208ENST00000583649 CYP2S1Q96SQ9 504 aa11.97□□□□□ -0.49
CASC3-208ENST00000583649 PYM1Q9BRP8 204 aaKnown RBP11.97□□□□□ -0.49
CASC3-208ENST00000583649 NTPCRQ9BSD7 190 aaKnown RBP11.97□□□□□ -0.49
CASC3-208ENST00000583649 LINC00597Q9H2U6 94 aa11.97□□□□□ -0.49
CASC3-208ENST00000583649 ZSWIM6Q9HCJ5 1215 aa11.97□□□□□ -0.49
CASC3-208ENST00000583649 POLD4Q9HCU8 107 aa11.97□□□□□ -0.49
CASC3-208ENST00000583649 DERAQ9Y315 318 aa11.97□□□□□ -0.49
CASC3-208ENST00000583649 A0A0A0MRY4 1105 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 A0A1B0GTW7 788 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 LACTBL1A8MY62 500 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 ABLIM1O14639 778 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 GJB3O75712 270 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 OR52Z1P0C646 297 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 MATKP42679 507 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 PPP3CCP48454 512 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 LIG4P49917 911 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 CFHR1Q03591 330 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 SCRN1Q12765 414 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 GRIK2Q13002 908 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 TMEM132DQ14C87 1099 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 SV2CQ496J9 727 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 C6orf118Q5T5N4 469 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 SLCO6A1Q86UG4 719 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 ZNF843Q8N446 348 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 RIN3Q8TB24 985 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 LEO1Q8WVC0 666 aaPredicted RBP11.96□□□□□ -0.49
CASC3-208ENST00000583649 SPIRE2Q8WWL2 714 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 ZNF419Q96HQ0 510 aaPredicted RBP11.96□□□□□ -0.49
CASC3-208ENST00000583649 FCRL3Q96P31 734 aaPredicted RBP11.96□□□□□ -0.49
CASC3-208ENST00000583649 CLMPQ9H6B4 373 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 CALCOCO1Q9P1Z2 691 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 TBC1D14Q9P2M4 693 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 NFE2L3Q9Y4A8 694 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 PCDHGB2Q9Y5G2 931 aa11.96□□□□□ -0.49
CASC3-208ENST00000583649 CACNA1EQ15878 2313 aa11.95□□□□□ -0.5
CASC3-208ENST00000583649 IGHV1OR15-9A0A0B4J2B8 117 aa11.95□□□□□ -0.5
CASC3-208ENST00000583649 FAM205CA6NFA0 338 aa11.95□□□□□ -0.5
CASC3-208ENST00000583649 MEI4A8MW99 385 aa11.95□□□□□ -0.5
CASC3-208ENST00000583649 PIRO00625 290 aa11.95□□□□□ -0.5
CASC3-208ENST00000583649 CBFA2T3O75081 653 aa11.95□□□□□ -0.5
CASC3-208ENST00000583649 C1QL1O75973 258 aa11.95□□□□□ -0.5
CASC3-208ENST00000583649 CDK4P11802 303 aa11.95□□□□□ -0.5
CASC3-208ENST00000583649 HOXB2P14652 356 aa11.95□□□□□ -0.5
CASC3-208ENST00000583649 ABCD1P33897 745 aa11.95□□□□□ -0.5
CASC3-208ENST00000583649 HNF1BP35680 557 aa11.95□□□□□ -0.5
CASC3-208ENST00000583649 PNPLA4P41247 253 aa11.95□□□□□ -0.5
CASC3-208ENST00000583649 MYL7Q01449 175 aa11.95□□□□□ -0.5
CASC3-208ENST00000583649 KCNC4Q03721 635 aa11.95□□□□□ -0.5
CASC3-208ENST00000583649 DHCR24Q15392 516 aa11.95□□□□□ -0.5
CASC3-208ENST00000583649 INAVAQ3KP66 663 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms