RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 CATSPERGQ6ZRH7 1159 aa5.16□□□□□ -1.58
SMCHD1-208ENST00000583344 CNGA4Q8IV77 575 aa5.16□□□□□ -1.58
SMCHD1-208ENST00000583344 XAGE5Q8WWM1 108 aa5.16□□□□□ -1.58
SMCHD1-208ENST00000583344 NDRG4Q9ULP0 352 aaKnown RBP5.16□□□□□ -1.58
SMCHD1-208ENST00000583344 hCG_1984214I3L0E3 225 aa5.15□□□□□ -1.59
SMCHD1-208ENST00000583344 KCNJ5P48544 419 aa5.15□□□□□ -1.59
SMCHD1-208ENST00000583344 HOXA4Q00056 320 aaPredicted RBP5.15□□□□□ -1.59
SMCHD1-208ENST00000583344 TMEM240Q5SV17 173 aa5.15□□□□□ -1.59
SMCHD1-208ENST00000583344 EMC10Q5UCC4 262 aa5.15□□□□□ -1.59
SMCHD1-208ENST00000583344 FCRL6Q6DN72 434 aa5.15□□□□□ -1.59
SMCHD1-208ENST00000583344 TRIM72Q6ZMU5 477 aa5.15□□□□□ -1.59
SMCHD1-208ENST00000583344 Q6ZWC4 215 aa5.15□□□□□ -1.59
SMCHD1-208ENST00000583344 PARS2Q7L3T8 475 aaKnown RBP5.15□□□□□ -1.59
SMCHD1-208ENST00000583344 RITA1Q96K30 269 aa5.15□□□□□ -1.59
SMCHD1-208ENST00000583344 ASB2Q96Q27 587 aa5.15□□□□□ -1.59
SMCHD1-208ENST00000583344 PRSS22Q9GZN4 317 aa5.15□□□□□ -1.59
SMCHD1-208ENST00000583344 ELOVL5Q9NYP7 299 aa5.15□□□□□ -1.59
SMCHD1-208ENST00000583344 CCNL1Q9UK58 526 aaPredicted RBP5.15□□□□□ -1.59
SMCHD1-208ENST00000583344 MRPS17Q9Y2R5 130 aaKnown RBP5.15□□□□□ -1.59
SMCHD1-208ENST00000583344 LUC7L2Q9Y383 392 aaKnown RBP5.15□□□□□ -1.59
SMCHD1-208ENST00000583344 SPEF1Q9Y4P9 236 aa5.15□□□□□ -1.59
SMCHD1-208ENST00000583344 PPEF2O14830 753 aa5.14□□□□□ -1.59
SMCHD1-208ENST00000583344 IKBKBO14920 756 aa5.14□□□□□ -1.59
SMCHD1-208ENST00000583344 ERC2O15083 957 aa5.14□□□□□ -1.59
SMCHD1-208ENST00000583344 E2F2Q14209 437 aa5.14□□□□□ -1.59
SMCHD1-208ENST00000583344 DEPDC1Q5TB30 811 aa5.14□□□□□ -1.59
SMCHD1-208ENST00000583344 KIRREL2Q6UWL6 708 aa5.14□□□□□ -1.59
SMCHD1-208ENST00000583344 GALNT16Q8N428 558 aa5.14□□□□□ -1.59
SMCHD1-208ENST00000583344 C8orf58Q8NAV2 365 aa5.14□□□□□ -1.59
SMCHD1-208ENST00000583344 RP9Q8TA86 221 aaKnown RBP5.14□□□□□ -1.59
SMCHD1-208ENST00000583344 HSPBAP1Q96EW2 488 aa5.14□□□□□ -1.59
SMCHD1-208ENST00000583344 MVB12AQ96EY5 273 aa5.14□□□□□ -1.59
SMCHD1-208ENST00000583344 VPS16Q9H269 839 aa5.14□□□□□ -1.59
SMCHD1-208ENST00000583344 ARMT1Q9H993 441 aa5.14□□□□□ -1.59
SMCHD1-208ENST00000583344 PLEKHM1Q9Y4G2 1056 aa5.14□□□□□ -1.59
SMCHD1-208ENST00000583344 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.14□□□□□ -1.59
SMCHD1-208ENST00000583344 CSF1RP07333 972 aa5.13□□□□□ -1.59
SMCHD1-208ENST00000583344 MMP13P45452 471 aa5.13□□□□□ -1.59
SMCHD1-208ENST00000583344 TPTEP56180 551 aa5.13□□□□□ -1.59
SMCHD1-208ENST00000583344 GPSM2P81274 684 aa5.13□□□□□ -1.59
SMCHD1-208ENST00000583344 AMOTQ4VCS5 1084 aa5.13□□□□□ -1.59
SMCHD1-208ENST00000583344 KHDC1LQ5JSQ8 128 aa5.13□□□□□ -1.59
SMCHD1-208ENST00000583344 TECPR1Q7Z6L1 1165 aa5.13□□□□□ -1.59
SMCHD1-208ENST00000583344 DAZAP1Q96EP5 407 aaKnown RBP5.13□□□□□ -1.59
SMCHD1-208ENST00000583344 CXorf36Q9H7Y0 433 aa5.13□□□□□ -1.59
SMCHD1-208ENST00000583344 ANLNQ9NQW6 1124 aa5.13□□□□□ -1.59
SMCHD1-208ENST00000583344 XPR1Q9UBH6 696 aa5.13□□□□□ -1.59
SMCHD1-208ENST00000583344 CPA4Q9UI42 421 aa5.13□□□□□ -1.59
SMCHD1-208ENST00000583344 ATAD2BQ9ULI0 1458 aa5.13□□□□□ -1.59
SMCHD1-208ENST00000583344 SYNJ1O43426 1573 aa5.12□□□□□ -1.59
SMCHD1-208ENST00000583344 EXOC3O60645 756 aa5.12□□□□□ -1.59
SMCHD1-208ENST00000583344 VNN1O95497 513 aa5.12□□□□□ -1.59
SMCHD1-208ENST00000583344 ALDH2P05091 517 aa5.12□□□□□ -1.59
SMCHD1-208ENST00000583344 FPR3P25089 353 aa5.12□□□□□ -1.59
SMCHD1-208ENST00000583344 ADORA2AP29274 412 aa5.12□□□□□ -1.59
SMCHD1-208ENST00000583344 VIPR2P41587 438 aa5.12□□□□□ -1.59
SMCHD1-208ENST00000583344 CCT4P50991 539 aaKnown RBP5.12□□□□□ -1.59
SMCHD1-208ENST00000583344 UCP3P55916 312 aa5.12□□□□□ -1.59
SMCHD1-208ENST00000583344 RABEP1Q15276 862 aa5.12□□□□□ -1.59
SMCHD1-208ENST00000583344 ZNF280BQ86YH2 543 aa5.12□□□□□ -1.59
SMCHD1-208ENST00000583344 PLBD2Q8NHP8 589 aa5.12□□□□□ -1.59
SMCHD1-208ENST00000583344 LENG8Q96PV6 779 aaPredicted RBP5.12□□□□□ -1.59
SMCHD1-208ENST00000583344 SARS2Q9NP81 518 aaKnown RBP5.12□□□□□ -1.59
SMCHD1-208ENST00000583344 KLHL13Q9P2N7 655 aa5.12□□□□□ -1.59
SMCHD1-208ENST00000583344 STAP2Q9UGK3 403 aa5.12□□□□□ -1.59
SMCHD1-208ENST00000583344 SHOC2Q9UQ13 582 aa5.12□□□□□ -1.59
SMCHD1-208ENST00000583344 DHX57Q6P158 1386 aaKnown RBP5.12□□□□□ -1.59
SMCHD1-208ENST00000583344 ERICH3Q5RHP9 1530 aa5.12□□□□□ -1.59
SMCHD1-208ENST00000583344 TRIM38O00635 465 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 KCNAB3O43448 404 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 TJP3O95049 919 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 PDE6CP51160 858 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 MYO1EQ12965 1108 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 DAZAP2Q15038 168 aaPredicted RBP5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 ZIK1Q3SY52 487 aaPredicted RBP5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 Q4G0T1 1027 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 L1TD1Q5T7N2 865 aaKnown RBP5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 AWAT2Q6E213 333 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 MIS18BP1Q6P0N0 1132 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 DPY19L3Q6ZPD9 716 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 ZBTB46Q86UZ6 589 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 SLC15A3Q8IY34 581 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 GRAMD1CQ8IYS0 662 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 TERB1Q8NA31 727 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 ABHD11Q8NFV4 315 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 SOCS4Q8WXH5 440 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 CDK5RAP3Q96JB5 506 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 MOGAT1Q96PD6 335 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 CGRRF1Q99675 332 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 THAP7Q9BT49 309 aaPredicted RBP5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 TUBA8Q9NY65 449 aaPredicted RBP5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 STXBP5LQ9Y2K9 1186 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 COL4A3BPQ9Y5P4 624 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 RRBP1Q9P2E9 1410 aaKnown RBP5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 PRXQ9BXM0 1461 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 TOP2BQ02880 1626 aa5.11□□□□□ -1.59
SMCHD1-208ENST00000583344 CYP2D7A0A087X1C5 515 aa5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 H7C1Q1 480 aa5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 BCAR3O75815 825 aa5.1□□□□□ -1.59
SMCHD1-208ENST00000583344 NTN1O95631 604 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms