RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 IL21Q9HBE4 155 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 ZFP14Q9HCL3 533 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 UXTQ9UBK9 157 aaPredicted RBP13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 DACH1Q9UI36 760 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 TECTAO75443 2155 aa13.41□□□□□ -0.26
SMARCE1-218ENST00000582955 F8VP50 259 aa13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 ECI2O75521 394 aa13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 CCDC130P13994 396 aa13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 FCARP24071 287 aa13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 CACNA2D1P54289 1103 aa13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 INCA1Q0VD86 236 aa13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 CETN1Q12798 172 aa13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 LRMPQ12912 555 aa13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 FAM35AQ86V20 835 aa13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 TRIM59Q8IWR1 403 aa13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 MRPS31Q92665 395 aaKnown RBP13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 TATDN2Q93075 761 aa13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 ELSPBP1Q96BH3 223 aa13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 SPATA17Q96L03 361 aa13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 NT5C1AQ9BXI3 368 aa13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 PLA2G2FQ9BZM2 168 aa13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 MFSD1Q9H3U5 465 aa13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 FAM49BQ9NUQ9 324 aa13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 COQ4Q9Y3A0 265 aa13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 TRIOO75962 3097 aa13.4□□□□□ -0.26
SMARCE1-218ENST00000582955 MBD3O95983 291 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 F11P03951 625 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 VIPR2P41587 438 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 MARSP56192 900 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 GPC5P78333 572 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 KCNH2Q12809 1159 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 GRM2Q14416 872 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 ZNF394Q53GI3 561 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 DENND5BQ6ZUT9 1274 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 BMP8AQ7Z5Y6 402 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 GPIHBP1Q8IV16 184 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 SUGP1Q8IWZ8 645 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 CRYBG2Q8N1P7 616 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 C12orf29Q8N999 325 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 SLC2A14Q8TDB8 520 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 TRMT2BQ96GJ1 504 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 SMARCD1Q96GM5 515 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 FAXDC2Q96IV6 333 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 CNOT6LQ96LI5 555 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 C8orf48Q96LL4 319 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 CEP295NLQ96MC4 621 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 TWNKQ96RR1 684 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 ARID3AQ99856 593 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 TASP1Q9H6P5 420 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 KRT82Q9NSB4 513 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 CISHQ9NSE2 258 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 CA14Q9ULX7 337 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 PTPRDP23468 1912 aa13.39□□□□□ -0.27
SMARCE1-218ENST00000582955 DPYSL4O14531 572 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 CILPO75339 1184 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 AP1G2O75843 785 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 PDGFBP01127 241 aaPredicted RBP13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 AFPP02771 609 aaKnown RBP13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 RFX1P22670 979 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 ADORA2BP29275 332 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 IFRD2Q12894 506 aaPredicted RBP13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 CUL2Q13617 745 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 VITQ6UXI7 678 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 TMEM150AQ86TG1 271 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 ARID3BQ8IVW6 561 aaPredicted RBP13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 FUKQ8N0W3 1084 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 SIX5Q8N196 739 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 FBXL6Q8N531 539 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 TTC39CQ8N584 583 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 MAB21L3Q8N8X9 362 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 MYRFLQ96LU7 910 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 MED15Q96RN5 788 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 TRPV4Q9HBA0 871 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 TRPC7Q9HCX4 862 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 DMAP1Q9NPF5 467 aaPredicted RBP13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 SLC2A4RGQ9NR83 387 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 TMEM30AQ9NV96 361 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 EHD2Q9NZN4 543 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 WNT16Q9UBV4 365 aa13.38□□□□□ -0.27
SMARCE1-218ENST00000582955 HEPACAM2A8MVW5 462 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 STK25O00506 426 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 PMM2O15305 246 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 P4HA2O15460 535 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 TADA3O75528 432 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 DDX6P26196 483 aaKnown RBP eCLIP13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 ERCC5P28715 1186 aaPredicted RBP13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 AVPR1AP37288 418 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 MTIF2P46199 727 aaKnown RBP13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 USP46P62068 366 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 YWHAEP62258 255 aaKnown RBP13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 TXNDC8Q6A555 127 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 PAQR9Q6ZVX9 377 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 YAF2Q8IY57 180 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 FLCNQ8NFG4 579 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 WHAMMQ8TF30 809 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 DEPDC1BQ8WUY9 529 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 E2F7Q96AV8 911 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 CYFIP2Q96F07 1278 aa13.37□□□□□ -0.27
SMARCE1-218ENST00000582955 HEXIM2Q96MH2 286 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms