RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 SNAI1O95863 264 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 AGTP01019 485 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 PAEPP09466 180 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 FGFR1P11362 822 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 TFDP1Q14186 410 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 OASLQ15646 514 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 TFDP3Q5H9I0 405 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 OR6B2Q6IFH4 312 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 PLPPR4Q7Z2D5 763 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 C3orf20Q8ND61 904 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 TCP11Q8WWU5 503 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 PPM1EQ8WY54 764 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 SLCO2A1Q92959 643 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 KIF12Q96FN5 646 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 OSMRQ99650 979 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 C16orf70Q9BSU1 422 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CD248Q9HCU0 757 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 SLCO1B3Q9NPD5 702 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 ERAP1Q9NZ08 941 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 DICER1Q9UPY3 1922 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 BTBD19C9JJ37 291 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 B4GALT4O60513 344 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 TSPAN1O60635 241 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CALB1P05937 261 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 PFKMP08237 780 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 YY1P25490 414 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CTCFP49711 727 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 GPX6P59796 221 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 ANKRD20A8PQ5CZ79 823 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 TNFAIP8L3Q5GJ75 292 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 PPP1R26Q5T8A7 1209 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 GKAP1Q5VSY0 366 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 NUGGCQ68CJ6 796 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CCDC121Q6ZUS5 278 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 C7orf31Q8N865 590 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 FAM167AQ96KS9 214 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 NXF3Q9H4D5 531 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 TSPAN16Q9UKR8 245 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 KCNH4Q9UQ05 1017 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 SNX9Q9Y5X1 595 aa11.24□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CLUHO75153 1309 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 ZNF638Q14966 1978 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 EXOC1LA0A1B0GW35 172 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 DNALI1O14645 258 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 HBP1O60381 514 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CILPO75339 1184 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 FAM155BO75949 473 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 HNRNPH1P31943 449 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 RPL22P35268 128 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 VCPP55072 806 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 PMF1Q6P1K2 205 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CYP4V2Q6ZWL3 525 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 TRMT10CQ7L0Y3 403 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 RCOR2Q8IZ40 523 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 AGGF1Q8N302 714 aaeCLIP11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 KIF2BQ8N4N8 673 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 KCTD6Q8NC69 237 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 TMEM40Q8WWA1 233 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 TMEM176AQ96HP8 235 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 FAM81BQ96LP2 452 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 RMDN2Q96LZ7 410 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 TNFSF13BQ9Y275 285 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 SYNJ2BP-COX16A0A087WUM0 186 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 RASA4BC9J798 803 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 H3BRB1 525 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 RASA4O43374 803 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 TJP3O95049 919 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CCDC130P13994 396 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 KDELR1P24390 212 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 GPD2P43304 727 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 WDR4P57081 412 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 BASP1P80723 227 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 ACTN3Q08043 901 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 PPIL2Q13356 520 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 TMEM132DQ14C87 1099 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 GOLGA7BQ2TAP0 167 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 RNASEH2BQ5TBB1 312 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 MTHFD1LQ6UB35 978 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 NPLOC4Q8TAT6 608 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 GRK7Q8WTQ7 553 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 RXFP2Q8WXD0 754 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CPT1BQ92523 772 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 ADPGKQ9BRR6 497 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 BCO2Q9BYV7 579 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 TUT1Q9H6E5 874 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 NGRNQ9NPE2 291 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 COX16Q9P0S2 106 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 HEY1Q9Y5J3 304 aa11.23□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CITO14578 2027 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 PLXNA1Q9UIW2 1896 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 C5orf60A6NFR6 353 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 SLC25A27O95847 323 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 OSBPP22059 807 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 LMO2P25791 158 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 ADORA2BP29275 332 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 SCTRP47872 440 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 BEX3Q00994 111 aa11.22□□□□□ -0.61
CDK5RAP3-225ENST00000582482 MGAT5Q09328 741 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms