RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 RBAKQ9NYW8 714 aaPredicted RBP9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CPSF3Q9UKF6 684 aaKnown RBP9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 MSRB2Q9Y3D2 182 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ANK1P16157 1881 aa9.38□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ASCC3Q8N3C0 2202 aaKnown RBP9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TRIP11Q15643 1979 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 THADAQ6YHU6 1953 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 MYO16Q9Y6X6 1858 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ARHGEF37A1IGU5 675 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TRIM49BA6NDI0 452 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 C4orf47A7E2U8 309 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ANKRD63C9JTQ0 380 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ARNTLO00327 626 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ABLIM1O14639 778 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ZNF197O14709 1029 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ZNF263O14978 683 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CYP2J2P51589 502 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 VAMP7P51809 220 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 PMS1P54277 932 aaKnown RBP9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 STX17P56962 302 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 DUOXA2Q1HG44 320 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 FAM78AQ5JUQ0 283 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 PRSS36Q5K4E3 855 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 SLC39A4Q6P5W5 647 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 POTEHQ6S545 545 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 VITQ6UXI7 678 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 KBTBD6Q86V97 674 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 PROSER1Q86XN7 944 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CEP57Q86XR8 500 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TRIM59Q8IWR1 403 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 GSTCDQ8NEC7 633 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CSGALNACT1Q8TDX6 532 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CBWD1Q9BRT8 395 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 FAM213AQ9BRX8 229 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 NUP58Q9BVL2 599 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 EIF2AQ9BY44 585 aaKnown RBP9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 RNF39Q9H2S5 420 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 SMOC1Q9H4F8 434 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 C8orf33Q9H7E9 229 aaPredicted RBP9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 GRPEL1Q9HAV7 217 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 RBM12Q9NTZ6 932 aaKnown RBP9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 HES2Q9Y543 173 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 PCNX2A6NKB5 2137 aa9.37□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CELSR3Q9NYQ7 3312 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TNRC6BQ9UPQ9 1833 aaKnown RBP9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 A0A1W2PQC6 194 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CLIC2O15247 247 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ADAM12O43184 909 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 B4GALT5O43286 388 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 FAM189A1O60320 539 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ZIC2O95409 532 aaPredicted RBP9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TNNC2P02585 160 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 LRG1P02750 347 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 AFPP02771 609 aaKnown RBP9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TPM1P09493 284 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 PTPN2P17706 415 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CYP3A5P20815 502 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 OR1D2P34982 312 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 UBASH3AP57075 661 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CYP24A1Q07973 514 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TUSC3Q13454 348 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TRIM14Q14142 442 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 VWA3BQ502W6 1294 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 KRT39Q6A163 491 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TCEAL6Q6IPX3 200 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 PDZD3Q86UT5 571 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 MFSD6LQ8IWD5 586 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TTC39CQ8N584 583 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 PARD3BQ8TEW8 1205 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TAF4BQ92750 862 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 SMARCD2Q92925 531 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TCEAL3Q969E4 200 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 JAKMIP2Q96AA8 810 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 MRFAP1L1Q96HT8 127 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ANKRD36BP1Q96IX9 119 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 UROC1Q96N76 676 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 IMPG2Q9BZV3 1241 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 RBSNQ9H1K0 784 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TMEM8AQ9HCN3 771 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 SAMSN1Q9NSI8 373 aaKnown RBP9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 MTRRQ9UBK8 725 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 GPSM3Q9Y4H4 160 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ATG2BQ96BY7 2078 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 NAV2Q8IVL1 2488 aa9.36□□□□□ -0.91
PDLIM1P3-201ENST00000582370 BPTFQ12830 3046 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 A0A1B0GTH6 734 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TTC26A0AVF1 554 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 LNP1A1A4G5 178 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 WDR27A2RRH5 827 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 LGALS16A8MUM7 142 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 KIF4AO95239 1232 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 NPTXRO95502 500 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 P4HA1P13674 534 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 KCNE1P15382 129 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TNNI1P19237 187 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TRIM21P19474 475 aaKnown RBP9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 PNPLA4P41247 253 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 KPNA1P52294 538 aaPredicted RBP9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CCINQ13939 588 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms