RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 THEM5Q8N1Q8 247 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 TTC16Q8NEE8 873 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 OLIG1Q8TAK6 271 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 CEP76Q8TAP6 659 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 SPPL2BQ8TCT7 592 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 HNRNPLLQ8WVV9 542 aaKnown RBP8.23□□□□□ -1.09
CCDC47-205ENST00000582331 RLN3Q8WXF3 142 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 DRC1Q96MC2 740 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 BBC3Q96PG8 261 aaPredicted RBP8.23□□□□□ -1.09
CCDC47-205ENST00000582331 FNBP1Q96RU3 617 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 TSPAN18Q96SJ8 248 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 NTPCRQ9BSD7 190 aaKnown RBP8.23□□□□□ -1.09
CCDC47-205ENST00000582331 C17orf75Q9HAS0 396 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 DDX19AQ9NUU7 478 aaKnown RBP8.23□□□□□ -1.09
CCDC47-205ENST00000582331 KCNG1Q9UIX4 513 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 PILRBQ9UKJ0 227 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 DSEQ9UL01 958 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 MMP17Q9ULZ9 603 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 MAGED2Q9UNF1 606 aaPredicted RBP8.23□□□□□ -1.09
CCDC47-205ENST00000582331 WNT6Q9Y6F9 365 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 LAMA5O15230 3695 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 SFI1A8K8P3 1242 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 TULP1O00294 542 aaPredicted RBP8.22□□□□□ -1.09
CCDC47-205ENST00000582331 PPEF2O14830 753 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 GPR37O15354 613 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 USP17L7P0C7H9 530 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 CSH1P0DML2 217 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 CSH2P0DML3 217 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 HOXD12P35452 270 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 MRPS21P82921 87 aaKnown RBP8.22□□□□□ -1.09
CCDC47-205ENST00000582331 TRIP6Q15654 476 aaKnown RBP8.22□□□□□ -1.09
CCDC47-205ENST00000582331 ZNF174Q15697 407 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 EML3Q32P44 896 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 SPATA1Q5VX52 437 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 LRRTM3Q86VH5 581 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 FRMD1Q8N878 549 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 GLIS3Q8NEA6 775 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 WHAMMQ8TF30 809 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 ADAMTS14Q8WXS8 1223 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 LRIG1Q96JA1 1093 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 TMEM206Q9H813 350 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 POLMQ9NP87 494 aaPredicted RBP8.22□□□□□ -1.09
CCDC47-205ENST00000582331 FSCN3Q9NQT6 498 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 ABI2Q9NYB9 513 aaPredicted RBP8.22□□□□□ -1.09
CCDC47-205ENST00000582331 LRWD1Q9UFC0 647 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 DNM3Q9UQ16 869 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 PCDHB9Q9Y5E1 797 aa8.22□□□□□ -1.09
CCDC47-205ENST00000582331 ASCC3Q8N3C0 2202 aaKnown RBP8.22□□□□□ -1.09
CCDC47-205ENST00000582331 PCNX2A6NKB5 2137 aa8.21□□□□□ -1.09
CCDC47-205ENST00000582331 ZNF638Q14966 1978 aaKnown RBP8.21□□□□□ -1.09
CCDC47-205ENST00000582331 TRAV19A0A0A6YYK7 116 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 ANTXRLA6NF34 631 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 E9PMD0 336 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 CYB561D2O14569 222 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 EPB41L2O43491 1005 aaKnown RBP8.21□□□□□ -1.1
CCDC47-205ENST00000582331 PRPF40AO75400 957 aaKnown RBP8.21□□□□□ -1.1
CCDC47-205ENST00000582331 NFATC1O95644 943 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 CKMP06732 381 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 SERPINF2P08697 491 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 MAPTP10636 758 aaKnown RBP8.21□□□□□ -1.1
CCDC47-205ENST00000582331 CD59P13987 128 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 HNRNPLP14866 589 aaKnown RBP eCLIP8.21□□□□□ -1.1
CCDC47-205ENST00000582331 ITPKAP23677 461 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 OPRD1P41143 372 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 TNFSF9P41273 254 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 SMTNP53814 917 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 MAPK7Q13164 816 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 ORC2Q13416 577 aaPredicted RBP8.21□□□□□ -1.1
CCDC47-205ENST00000582331 LAPTM4AQ15012 233 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 ZNF77Q15935 545 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 ENOX2Q16206 610 aaKnown RBP8.21□□□□□ -1.1
CCDC47-205ENST00000582331 KYAT1Q16773 422 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 MAP7D1Q3KQU3 841 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 PEAR1Q5VY43 1037 aaPredicted RBP8.21□□□□□ -1.1
CCDC47-205ENST00000582331 C9orf57Q5W0N0 161 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 RINT1Q6NUQ1 792 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 CCNI2Q6ZMN8 369 aaPredicted RBP8.21□□□□□ -1.1
CCDC47-205ENST00000582331 EFCAB13Q8IY85 973 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 DCP1BQ8IZD4 617 aaKnown RBP8.21□□□□□ -1.1
CCDC47-205ENST00000582331 PGBD3Q8N328 593 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 MINDY1Q8N5J2 469 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 TXNDC5Q8NBS9 432 aaKnown RBP8.21□□□□□ -1.1
CCDC47-205ENST00000582331 TMEM161BQ8NDZ6 487 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 SPIRE2Q8WWL2 714 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 CAMK1GQ96NX5 476 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 CYP2S1Q96SQ9 504 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 RUSC1Q9BVN2 902 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 TIPINQ9BVW5 301 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 HAPLN2Q9GZV7 340 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 LINC00597Q9H2U6 94 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 RPF1Q9H9Y2 349 aaKnown RBP8.21□□□□□ -1.1
CCDC47-205ENST00000582331 TRPC7Q9HCX4 862 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 BCCIPQ9P287 314 aaKnown RBP eCLIP8.21□□□□□ -1.1
CCDC47-205ENST00000582331 UXTQ9UBK9 157 aaPredicted RBP8.21□□□□□ -1.1
CCDC47-205ENST00000582331 PCDHB5Q9Y5E4 795 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 KIAA1549LQ6ZVL6 1849 aa8.21□□□□□ -1.1
CCDC47-205ENST00000582331 ATXN2Q99700 1313 aaKnown RBP8.21□□□□□ -1.1
CCDC47-205ENST00000582331 IGSF10Q6WRI0 2623 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 MYO16Q9Y6X6 1858 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 ANO9A1A5B4 782 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms