RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 RAD9AQ99638 391 aa9.8□□□□□ -0.84
SS18-220ENST00000582092 ELOVL4Q9GZR5 314 aa9.8□□□□□ -0.84
SS18-220ENST00000582092 RAB17Q9H0T7 212 aa9.8□□□□□ -0.84
SS18-220ENST00000582092 SDCBP2Q9H190 292 aa9.8□□□□□ -0.84
SS18-220ENST00000582092 TSPYL2Q9H2G4 693 aaPredicted RBP9.8□□□□□ -0.84
SS18-220ENST00000582092 EPB41L5Q9HCM4 733 aa9.8□□□□□ -0.84
SS18-220ENST00000582092 ASNSD1Q9NWL6 643 aa9.8□□□□□ -0.84
SS18-220ENST00000582092 OGFRQ9NZT2 677 aa9.8□□□□□ -0.84
SS18-220ENST00000582092 FEZ2Q9UHY8 353 aaPredicted RBP9.8□□□□□ -0.84
SS18-220ENST00000582092 PADI3Q9ULW8 664 aa9.8□□□□□ -0.84
SS18-220ENST00000582092 NLRC5Q86WI3 1866 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 TTC3P53804 2025 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 SIGLEC16A6NMB1 481 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 PIRO00625 290 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 CYB561D2O14569 222 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 ZMYND10O75800 440 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 SEC31AO94979 1220 aaKnown RBP9.79□□□□□ -0.84
SS18-220ENST00000582092 GJB5O95377 273 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 CA3P07451 260 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 PDGFRBP09619 1106 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 FAM163BP0C2L3 166 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 SETSIPP0DME0 302 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 IGFBP4P22692 258 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 PAX3P23760 479 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 PSMA2P25787 234 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 CD52P31358 61 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 RPL9P32969 192 aaKnown RBP9.79□□□□□ -0.84
SS18-220ENST00000582092 MAN1A1P33908 653 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 GUCY2DQ02846 1103 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 INCA1Q0VD86 236 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 HLTFQ14527 1009 aaKnown RBP eCLIP9.79□□□□□ -0.84
SS18-220ENST00000582092 MBTPS1Q14703 1052 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 GPNMBQ14956 572 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 XKR4Q5GH76 650 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 CYP4A22Q5TCH4 519 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 SCARA3Q6AZY7 606 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 LCLAT1Q6UWP7 414 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 CCNI2Q6ZMN8 369 aaPredicted RBP9.79□□□□□ -0.84
SS18-220ENST00000582092 CCDC105Q8IYK2 499 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 RCOR2Q8IZ40 523 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 TOP6BLQ8N6T0 577 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 GOLGA6L1Q8N7Z2 621 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 DDX27Q96GQ7 796 aaKnown RBP9.79□□□□□ -0.84
SS18-220ENST00000582092 RBM41Q96IZ5 413 aaKnown RBP9.79□□□□□ -0.84
SS18-220ENST00000582092 RUFY1Q96T51 708 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 ADAM2Q99965 735 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 NCAPGQ9BPX3 1015 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 MRPL45Q9BRJ2 306 aaKnown RBP9.79□□□□□ -0.84
SS18-220ENST00000582092 MED10Q9BTT4 135 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 RNF39Q9H2S5 420 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 PRDM12Q9H4Q4 367 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 HOMER3Q9NSC5 361 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 GDAP2Q9NXN4 497 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 DDX56Q9NY93 547 aaKnown RBP9.79□□□□□ -0.84
SS18-220ENST00000582092 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.79□□□□□ -0.84
SS18-220ENST00000582092 YBX2Q9Y2T7 364 aaKnown RBP9.79□□□□□ -0.84
SS18-220ENST00000582092 ANK1P16157 1881 aa9.79□□□□□ -0.84
SS18-220ENST00000582092 FAM187AA6NFU0 413 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 TMEM191CA6NGB0 347 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 O00370 1275 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 MEFVO15553 781 aaPredicted RBP9.78□□□□□ -0.84
SS18-220ENST00000582092 SART1O43290 800 aaKnown RBP9.78□□□□□ -0.84
SS18-220ENST00000582092 KRT7P08729 469 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 CHRNA3P32297 505 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 ACADSBP45954 432 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 DEFB103AP81534 67 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 DR1Q01658 176 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 CUL1Q13616 776 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 DHX34Q14147 1143 aaKnown RBP9.78□□□□□ -0.84
SS18-220ENST00000582092 FAM117BQ6P1L5 589 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 ADGRF2Q8IZF7 708 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 KRT222Q8N1A0 295 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 CXorf38Q8TB03 319 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 URGCPQ8TCY9 931 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 WHAMMQ8TF30 809 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.78□□□□□ -0.84
SS18-220ENST00000582092 KRT35Q92764 455 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 SAMD11Q96NU1 681 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 FAM193BQ96PV7 902 aaPredicted RBP9.78□□□□□ -0.84
SS18-220ENST00000582092 YME1L1Q96TA2 773 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 GAD1Q99259 594 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 RSAD1Q9HA92 442 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 ERVK-5Q9HDB9 667 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 FAM114A2Q9NRY5 505 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 FAM49BQ9NUQ9 324 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 RNF19AQ9NV58 838 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 TSPAN16Q9UKR8 245 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 RALGAPA2Q2PPJ7 1873 aa9.78□□□□□ -0.84
SS18-220ENST00000582092 LAMA3Q16787 3333 aa9.77□□□□□ -0.84
SS18-220ENST00000582092 ARL5CA6NH57 179 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 PODXLO00592 558 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 RAD51CO43502 376 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 ZNF623O75123 536 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 PHF2O75151 1096 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 UPP2O95045 317 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 KRT1P04264 644 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 PYGMP11217 842 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 MYOGP15173 224 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 ADORA2BP29275 332 aa9.77□□□□□ -0.85
SS18-220ENST00000582092 LRPAP1P30533 357 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms