RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	IMPG2	Q9BZV3	1241 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	DNAI2	Q9GZS0	605 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	HEBP1	Q9NRV9	189 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	NXF1	Q9UBU9	619 aa	Known RBP	13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	MIA3	Q5JRA6	1907 aa		13.43	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	CETN3	O15182	167 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ATP2C2	O75185	946 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	AKAP3	O75969	853 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	VNN1	O95497	513 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ASS1	P00966	412 aa	Known RBP	13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	PDGFRB	P09619	1106 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	CYP27A1	Q02318	531 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	UBXN2B	Q14CS0	331 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ZNF528	Q3MIS6	628 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	STXBP5	Q5T5C0	1151 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	UNC93A	Q86WB7	457 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	RALGPS2	Q86X27	583 aa	Predicted RBP	13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	C1orf210	Q8IVY1	113 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	SCN4B	Q8IWT1	228 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	FAM186B	Q8IYM0	893 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	TTC39C	Q8N584	583 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	B3GALNT2	Q8NCR0	500 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	TTLL2	Q9BWV7	592 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	FOXQ1	Q9C009	403 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	TDP1	Q9NUW8	608 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	FBXO4	Q9UKT5	387 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	PIAS3	Q9Y6X2	628 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	WDR87	Q6ZQQ6	2873 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	PTPRD	P23468	1912 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	COL4A2	P08572	1712 aa		13.42	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	SLC16A3	O15427	465 aa	Known RBP	13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	DCN	P07585	359 aa	Known RBP	13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	TCF3	P15923	654 aa		13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	BDNF	P23560	247 aa		13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	GRIK1	P39086	918 aa		13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	PSMC1	P62191	440 aa	Known RBP	13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	DLG4	P78352	724 aa		13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	CYP4F8	P98187	520 aa		13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	LRRC63	Q05C16	580 aa		13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	PNOC	Q13519	176 aa		13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	C1orf220	Q5T0J3	134 aa		13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	FOXR2	Q6PJQ5	311 aa		13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ZC3H14	Q6PJT7	736 aa	Known RBP	13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	DENND5B	Q6ZUT9	1274 aa		13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ALYREF	Q86V81	257 aa	Known RBP	13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	CRYBG2	Q8N1P7	616 aa		13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	CCDC150	Q8NCX0	1101 aa		13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	SMARCE1	Q969G3	411 aa		13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	RSPRY1	Q96DX4	576 aa		13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	TSG101	Q99816	390 aa		13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	CYP3A43	Q9HB55	503 aa		13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	TMEM8A	Q9HCN3	771 aa		13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	COMMD8	Q9NX08	183 aa		13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	MAPK8IP1	Q9UQF2	711 aa		13.41	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	TRAV19	A0A0A6YYK7	116 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	SHISA7	A6NL88	538 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	HCRT	O43612	131 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	KIN	O60870	393 aa	Known RBP	13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	PRAMEF12	O95522	483 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	USP17L7	P0C7H9	530 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	EPB41	P11171	864 aa	Known RBP	13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	TARS	P26639	723 aa	Known RBP	13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	PIK3CA	P42336	1068 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	GPR15	P49685	360 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	FKBP3	Q00688	224 aa	Known RBP	13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	AMPD2	Q01433	879 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	STIM1	Q13586	685 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	PDGFRL	Q15198	375 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	MDH1B	Q5I0G3	518 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	ZNF687	Q8N1G0	1237 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	MAB21L3	Q8N8X9	362 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	PDZD8	Q8NEN9	1154 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	OVCA2	Q8WZ82	227 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	FAM3C	Q92520	227 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	SMYD3	Q9H7B4	428 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	TRPM5	Q9NZQ8	1165 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	PCDHA5	Q9Y5H7	936 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	GREB1	Q4ZG55	1949 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	OBSL1	O75147	1896 aa		13.4	□□□□□ -0.26
CDK5RAP3-222	ENST00000581708	NCAN	O14594	1321 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	TICRR	Q7Z2Z1	1910 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708		F8VP50	259 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	PSMA7	O14818	248 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	LAMTOR5	O43504	91 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	TADA3	O75528	432 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	RTN3	O95197	1032 aa	Predicted RBP	13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	HLA-DRA	P01903	254 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	PRCP	P42785	496 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	KPNA1	P52294	538 aa	Predicted RBP	13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	INCA1	Q0VD86	236 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	FZD5	Q13467	585 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	LRRC32	Q14392	662 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	PPP2R5D	Q14738	602 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	ITPRIPL2	Q3MIP1	535 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	SDHAF4	Q5VUM1	108 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	KRT39	Q6A163	491 aa		13.39	□□□□□ -0.27
CDK5RAP3-222	ENST00000581708	TXNDC8	Q6A555	127 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms