RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 TFAMQ00059 246 aaKnown RBP10.66□□□□□ -0.7
RFFL-208ENST00000581039 USP4Q13107 963 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 POSTNQ15063 836 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 ZC2HC1CQ53FD0 456 aaPredicted RBP10.66□□□□□ -0.7
RFFL-208ENST00000581039 INTS6LQ5JSJ4 861 aaKnown RBP10.66□□□□□ -0.7
RFFL-208ENST00000581039 LMBRD2Q68DH5 695 aaPredicted RBP10.66□□□□□ -0.7
RFFL-208ENST00000581039 KIAA1211LQ6NV74 962 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 SCN4BQ8IWT1 228 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 TMEM86AQ8N2M4 240 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 MDGA1Q8NFP4 955 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 RASSF8Q8NHQ8 419 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 LRRC15Q8TF66 581 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 CACTINQ8WUQ7 758 aaKnown RBP10.66□□□□□ -0.7
RFFL-208ENST00000581039 POMGNT1Q8WZA1 660 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 SPACA7Q96KW9 195 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 GCNT4Q9P109 453 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 BCCIPQ9P287 314 aaKnown RBP eCLIP10.66□□□□□ -0.7
RFFL-208ENST00000581039 L1RE1Q9UN81 338 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 ARHGAP26Q9UNA1 814 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 LHX6Q9UPM6 363 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 AGAP1Q9UPQ3 857 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 KIF3AQ9Y496 699 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 NEUROG3Q9Y4Z2 214 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 EML5Q05BV3 1969 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 LAMA1P25391 3075 aa10.66□□□□□ -0.7
RFFL-208ENST00000581039 MYH11P35749 1972 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 HYAL3O43820 417 aaPredicted RBP10.65□□□□□ -0.7
RFFL-208ENST00000581039 ITGB3P05106 788 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 TCF3P15923 654 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 ENGP17813 658 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 POLR2BP30876 1174 aaKnown RBP10.65□□□□□ -0.7
RFFL-208ENST00000581039 OPRD1P41143 372 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 DPP6P42658 865 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 LHX1P48742 406 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 ATXN3P54252 364 aaPredicted RBP10.65□□□□□ -0.7
RFFL-208ENST00000581039 SIM1P81133 766 aaPredicted RBP10.65□□□□□ -0.7
RFFL-208ENST00000581039 RING1Q06587 406 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 BYSLQ13895 437 aaKnown RBP10.65□□□□□ -0.7
RFFL-208ENST00000581039 MCM6Q14566 821 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 CFAP221Q4G0U5 840 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 CRELD2Q6UXH1 353 aaPredicted RBP10.65□□□□□ -0.7
RFFL-208ENST00000581039 ARMCX6Q7L4S7 300 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 SYT12Q8IV01 421 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 TMEFF1Q8IYR6 380 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 CSGALNACT2Q8N6G5 542 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 OLIG1Q8TAK6 271 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 WHAMMQ8TF30 809 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 RLN3Q8WXF3 142 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 RAD54LQ92698 747 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 FUBP3Q96I24 572 aaKnown RBP eCLIP10.65□□□□□ -0.7
RFFL-208ENST00000581039 FIZ1Q96SL8 496 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 ST6GALNAC4Q9H4F1 302 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 POLMQ9NP87 494 aaPredicted RBP10.65□□□□□ -0.7
RFFL-208ENST00000581039 BLOC1S4Q9NUP1 217 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 MSRB2Q9Y3D2 182 aa10.65□□□□□ -0.7
RFFL-208ENST00000581039 SCN1AP35498 2009 aa10.65□□□□□ -0.71
RFFL-208ENST00000581039 ZZEF1O43149 2961 aa10.65□□□□□ -0.71
RFFL-208ENST00000581039 ZNF638Q14966 1978 aaKnown RBP10.65□□□□□ -0.71
RFFL-208ENST00000581039 FASNP49327 2511 aaKnown RBP10.64□□□□□ -0.71
RFFL-208ENST00000581039 ASPMQ8IZT6 3477 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 SPAARA0A1B0GVQ0 90 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 LEFTY2O00292 366 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 SLC9A3R1O14745 358 aaPredicted RBP10.64□□□□□ -0.71
RFFL-208ENST00000581039 KLF8O95600 359 aaPredicted RBP10.64□□□□□ -0.71
RFFL-208ENST00000581039 KRT19P08727 400 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 PFKLP17858 780 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 PCSK1P29120 753 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 P2RY2P41231 377 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 PTGER3P43115 390 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 MAGEA11P43364 429 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 SLC6A11P48066 632 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 HSF5Q4G112 596 aaPredicted RBP10.64□□□□□ -0.71
RFFL-208ENST00000581039 SPDYCQ5MJ68 293 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 EOGTQ5NDL2 527 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 TMEM92Q6UXU6 159 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 C4orf50Q6ZRC1 276 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 ZNF720Q7Z2F6 126 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 ADGRG2Q8IZP9 1017 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 PGBD3Q8N328 593 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 HDDC3Q8N4P3 179 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 ALLCQ8N6M5 410 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 TOP6BLQ8N6T0 577 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 KRI1Q8N9T8 703 aaKnown RBP10.64□□□□□ -0.71
RFFL-208ENST00000581039 TXNDC5Q8NBS9 432 aaKnown RBP10.64□□□□□ -0.71
RFFL-208ENST00000581039 SPATA18Q8TC71 538 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 FNBP1Q96RU3 617 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 PNKPQ96T60 521 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 PKMYT1Q99640 499 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 FAM213AQ9BRX8 229 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 TMEM74BQ9NUR3 256 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 TRPM5Q9NZQ8 1165 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 MAGEC2Q9UBF1 373 aaPredicted RBP10.64□□□□□ -0.71
RFFL-208ENST00000581039 EXOC7Q9UPT5 735 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 R3HCC1Q9Y3T6 440 aaKnown RBP10.64□□□□□ -0.71
RFFL-208ENST00000581039 SNX9Q9Y5X1 595 aa10.64□□□□□ -0.71
RFFL-208ENST00000581039 ANKRD11Q6UB99 2663 aaPredicted RBP10.63□□□□□ -0.71
RFFL-208ENST00000581039 PKD1L2Q7Z442 2459 aa10.63□□□□□ -0.71
RFFL-208ENST00000581039 THADAQ6YHU6 1953 aa10.63□□□□□ -0.71
RFFL-208ENST00000581039 ANTXRLA6NF34 631 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms