RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 CBWD5Q5RIA9 395 aa13.41□□□□□ -0.26
CBX1-206ENST00000581003 INTS8Q75QN2 995 aaKnown RBP13.41□□□□□ -0.26
CBX1-206ENST00000581003 MFSD6LQ8IWD5 586 aa13.41□□□□□ -0.26
CBX1-206ENST00000581003 ZC3H3Q8IXZ2 948 aaKnown RBP13.41□□□□□ -0.26
CBX1-206ENST00000581003 C12orf29Q8N999 325 aa13.41□□□□□ -0.26
CBX1-206ENST00000581003 DTWD2Q8NBA8 298 aa13.41□□□□□ -0.26
CBX1-206ENST00000581003 USP13Q92995 863 aaPredicted RBP13.41□□□□□ -0.26
CBX1-206ENST00000581003 FUBP3Q96I24 572 aaKnown RBP eCLIP13.41□□□□□ -0.26
CBX1-206ENST00000581003 GCNAQ96QF7 691 aa13.41□□□□□ -0.26
CBX1-206ENST00000581003 KCNK16Q96T55 309 aa13.41□□□□□ -0.26
CBX1-206ENST00000581003 ARID3AQ99856 593 aa13.41□□□□□ -0.26
CBX1-206ENST00000581003 TRPC7Q9HCX4 862 aa13.41□□□□□ -0.26
CBX1-206ENST00000581003 FAM49BQ9NUQ9 324 aa13.41□□□□□ -0.26
CBX1-206ENST00000581003 NUP210Q8TEM1 1887 aaPredicted RBP13.41□□□□□ -0.26
CBX1-206ENST00000581003 KANSL1LA0AUZ9 987 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 IKBKBO14920 756 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 ZNF263O14978 683 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 MAPK13O15264 365 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 BEST1O76090 585 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 SMC2O95347 1197 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 CSH1P0DML2 217 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 CSH2P0DML3 217 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 KRT13P13646 458 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 CD58P19256 250 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 AP3M2P53677 418 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 PTPN5P54829 565 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 NOP14P78316 857 aaKnown RBP13.4□□□□□ -0.26
CBX1-206ENST00000581003 FCHO2Q0JRZ9 810 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 CAMK4Q16566 473 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 ARHGAP15Q53QZ3 475 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 DCAF17Q5H9S7 520 aaPredicted RBP13.4□□□□□ -0.26
CBX1-206ENST00000581003 TRIM68Q6AZZ1 485 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 KLHL10Q6JEL2 608 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 PHLDB3Q6NSJ2 640 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 C4orf50Q6ZRC1 276 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 FAM35AQ86V20 835 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 ALYREFQ86V81 257 aaKnown RBP13.4□□□□□ -0.26
CBX1-206ENST00000581003 CMTM8Q8IZV2 173 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 FUKQ8N0W3 1084 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 ZNF687Q8N1G0 1237 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 DUSP9Q99956 384 aaKnown RBP13.4□□□□□ -0.26
CBX1-206ENST00000581003 LTB4R2Q9NPC1 389 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 GTSE1Q9NYZ3 720 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 CHMP5Q9NZZ3 219 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 NDRG2Q9UN36 371 aaKnown RBP13.4□□□□□ -0.26
CBX1-206ENST00000581003 CTNND2Q9UQB3 1225 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 SIT1Q9Y3P8 196 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 PIAS3Q9Y6X2 628 aa13.4□□□□□ -0.26
CBX1-206ENST00000581003 OTOL1A6NHN0 477 aaPredicted RBP13.39□□□□□ -0.27
CBX1-206ENST00000581003 FAM170BA6NMN3 283 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 PPP1R3GB7ZBB8 358 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 SCAMP3O14828 347 aaKnown RBP13.39□□□□□ -0.27
CBX1-206ENST00000581003 FGF19O95750 216 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 RPL13P26373 211 aaKnown RBP13.39□□□□□ -0.27
CBX1-206ENST00000581003 PGFP49763 221 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 ZXDBP98169 803 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 PFKPQ01813 784 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 FZD5Q13467 585 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 ANGPT1Q15389 498 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 SGSM1Q2NKQ1 1148 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 COBLL1Q53SF7 1204 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 NAIF1Q69YI7 327 aaPredicted RBP13.39□□□□□ -0.27
CBX1-206ENST00000581003 TXNDC11Q6PKC3 985 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 VSTM1Q6UX27 236 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 WHAMMQ8TF30 809 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 DEPDC1BQ8WUY9 529 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 ATOH1Q92858 354 aaPredicted RBP13.39□□□□□ -0.27
CBX1-206ENST00000581003 DNASE1L2Q92874 299 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 CHFRQ96EP1 664 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 TRMT2BQ96GJ1 504 aaKnown RBP13.39□□□□□ -0.27
CBX1-206ENST00000581003 MYRFLQ96LU7 910 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 BCO2Q9BYV7 579 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 GPR88Q9GZN0 384 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 KCNH6Q9H252 994 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 TMEM8AQ9HCN3 771 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 KRT82Q9NSB4 513 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 KIF26AQ9ULI4 1882 aaPredicted RBP13.39□□□□□ -0.27
CBX1-206ENST00000581003 USP34Q70CQ2 3546 aa13.39□□□□□ -0.27
CBX1-206ENST00000581003 CETN3O15182 167 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 EPB41P11171 864 aaKnown RBP13.38□□□□□ -0.27
CBX1-206ENST00000581003 ARSAP15289 507 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 CCNE1P24864 410 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 HOXC13P31276 330 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 MXI1P50539 228 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 STX17P56962 302 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 PRKCQQ04759 706 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 MORC3Q14149 939 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 MAPRE1Q15691 268 aaKnown RBP13.38□□□□□ -0.27
CBX1-206ENST00000581003 TCERG1LQ5VWI1 586 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 TTI2Q6NXR4 508 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 GPRIN1Q7Z2K8 1008 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 MON1AQ86VX9 555 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 YAF2Q8IY57 180 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 MAML2Q8IZL2 1156 aaPredicted RBP13.38□□□□□ -0.27
CBX1-206ENST00000581003 ARL14EPQ8N8R7 260 aaPredicted RBP13.38□□□□□ -0.27
CBX1-206ENST00000581003 ZMIZ2Q8NF64 920 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 SCAMP5Q8TAC9 235 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 SLC2A14Q8TDB8 520 aa13.38□□□□□ -0.27
CBX1-206ENST00000581003 MRPS31Q92665 395 aaKnown RBP13.38□□□□□ -0.27
CBX1-206ENST00000581003 TATDN2Q93075 761 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms