RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 SFMBT2Q5VUG0 894 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 DMRTA1Q5VZB9 504 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 PPP1R2P3Q6NXS1 205 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 CYP26C1Q6V0L0 522 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 TRIM72Q6ZMU5 477 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 RNF19BQ6ZMZ0 732 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 CCDC149Q6ZUS6 474 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 PAQR9Q6ZVX9 377 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 FAM35AQ86V20 835 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 SPATA2LQ8IUW3 424 aaPredicted RBP11.03□□□□□ -0.64
CCDC47-203ENST00000580986 EFHBQ8N7U6 833 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 C12orf29Q8N999 325 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 ANKRD52Q8NB46 1076 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 SLC22A17Q8WUG5 538 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 ZNF606Q8WXB4 792 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 DDX1Q92499 740 aaKnown RBP11.03□□□□□ -0.64
CCDC47-203ENST00000580986 MYLPFQ96A32 169 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 PDLIM2Q96JY6 352 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 HEXIM2Q96MH2 286 aaKnown RBP11.03□□□□□ -0.64
CCDC47-203ENST00000580986 TMEM209Q96SK2 561 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 SYT11Q9BT88 431 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 B3GNT5Q9BYG0 378 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 UBXN6Q9BZV1 441 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 LHX5Q9H2C1 402 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 TLE6Q9H808 572 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 CYLDQ9NQC7 956 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 ABHD10Q9NUJ1 306 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 ZDHHC7Q9NXF8 308 aa11.03□□□□□ -0.64
CCDC47-203ENST00000580986 NOCTQ9UK39 431 aaKnown RBP11.03□□□□□ -0.64
CCDC47-203ENST00000580986 SSU72P8A0A1W2PR75 194 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 RFXAPO00287 272 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 TRIM66O15016 1216 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 HCRTO43612 131 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 ATP2C2O75185 946 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 VNN2O95498 520 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 LSM8O95777 96 aaKnown RBP11.02□□□□□ -0.65
CCDC47-203ENST00000580986 SERPING1P05155 500 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 HNRNPA1P09651 372 aaKnown RBP eCLIP11.02□□□□□ -0.65
CCDC47-203ENST00000580986 OR4Q2P0C623 313 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 FAM200BP0CF97 657 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 SRGAP2BP0DMP2 458 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 HAPLN1P10915 354 aaPredicted RBP11.02□□□□□ -0.65
CCDC47-203ENST00000580986 CD19P15391 556 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 NPR3P17342 541 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 RPL17P18621 184 aaKnown RBP11.02□□□□□ -0.65
CCDC47-203ENST00000580986 USP8P40818 1118 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 SLC8A3P57103 927 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 RPL10AP62906 217 aaKnown RBP11.02□□□□□ -0.65
CCDC47-203ENST00000580986 CDR2Q01850 454 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 ADCY1Q08828 1119 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 PLD1Q13393 1074 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 ADGRE1Q14246 886 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 ASIC2Q16515 512 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 CTC1Q2NKJ3 1217 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 TSR1Q2NL82 804 aaKnown RBP11.02□□□□□ -0.65
CCDC47-203ENST00000580986 PPP1R26Q5T8A7 1209 aaPredicted RBP11.02□□□□□ -0.65
CCDC47-203ENST00000580986 HGSNATQ68CP4 663 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 SLC47A2Q86VL8 602 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 TC2NQ8N9U0 490 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 CMASQ8NFW8 434 aaPredicted RBP11.02□□□□□ -0.65
CCDC47-203ENST00000580986 SLC2A14Q8TDB8 520 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 STK32AQ8WU08 396 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 TFAP2BQ92481 460 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 CASP10Q92851 521 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 SPATA17Q96L03 361 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 C8orf48Q96LL4 319 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 PANX2Q96RD6 677 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 ZSWIM1Q9BR11 485 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 DUSP16Q9BY84 665 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 ZNF518BQ9C0D4 1074 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 DMAP1Q9NPF5 467 aaPredicted RBP11.02□□□□□ -0.65
CCDC47-203ENST00000580986 TMLHEQ9NVH6 421 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 DZANK1Q9NVP4 752 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 HESX1Q9UBX0 185 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 TSPAN16Q9UKR8 245 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 HCFC2Q9Y5Z7 792 aa11.02□□□□□ -0.65
CCDC47-203ENST00000580986 XPO1O14980 1071 aaKnown RBP11.01□□□□□ -0.65
CCDC47-203ENST00000580986 THAP12O43422 761 aa11.01□□□□□ -0.65
CCDC47-203ENST00000580986 PNMA6AP0CW24 399 aaPredicted RBP11.01□□□□□ -0.65
CCDC47-203ENST00000580986 CCDC130P13994 396 aa11.01□□□□□ -0.65
CCDC47-203ENST00000580986 BRD2P25440 801 aaKnown RBP11.01□□□□□ -0.65
CCDC47-203ENST00000580986 ELF1P32519 619 aa11.01□□□□□ -0.65
CCDC47-203ENST00000580986 PLA2G4AP47712 749 aa11.01□□□□□ -0.65
CCDC47-203ENST00000580986 RPL34P49207 117 aaKnown RBP11.01□□□□□ -0.65
CCDC47-203ENST00000580986 CYP27A1Q02318 531 aa11.01□□□□□ -0.65
CCDC47-203ENST00000580986 KLHL30Q0D2K2 578 aa11.01□□□□□ -0.65
CCDC47-203ENST00000580986 BST2Q10589 180 aaKnown RBP11.01□□□□□ -0.65
CCDC47-203ENST00000580986 HYAL1Q12794 435 aa11.01□□□□□ -0.65
CCDC47-203ENST00000580986 LIN9Q5TKA1 542 aa11.01□□□□□ -0.65
CCDC47-203ENST00000580986 E4F1Q66K89 784 aaPredicted RBP11.01□□□□□ -0.65
CCDC47-203ENST00000580986 ADGRD2Q7Z7M1 963 aa11.01□□□□□ -0.65
CCDC47-203ENST00000580986 NOP9Q86U38 636 aaKnown RBP11.01□□□□□ -0.65
CCDC47-203ENST00000580986 ATAD1Q8NBU5 361 aa11.01□□□□□ -0.65
CCDC47-203ENST00000580986 KREMEN2Q8NCW0 462 aa11.01□□□□□ -0.65
CCDC47-203ENST00000580986 SLC35F5Q8WV83 523 aa11.01□□□□□ -0.65
CCDC47-203ENST00000580986 HSFY1Q96LI6 401 aa11.01□□□□□ -0.65
CCDC47-203ENST00000580986 FAM49BQ9NUQ9 324 aa11.01□□□□□ -0.65
CCDC47-203ENST00000580986 ZNHIT6Q9NWK9 470 aaKnown RBP11.01□□□□□ -0.65
CCDC47-203ENST00000580986 COMMD8Q9NX08 183 aa11.01□□□□□ -0.65
CCDC47-203ENST00000580986 MTMR10Q9NXD2 777 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms