RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 KCNK12Q9HB15 430 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 DDX43Q9NXZ2 648 aaKnown RBP12.92□□□□□ -0.34
CCDC84-209ENST00000580556 DLL3Q9NYJ7 618 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 CDH9Q9ULB4 789 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 DUSP12Q9UNI6 340 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.92□□□□□ -0.346e-6■□□□□ 8.1
CCDC84-209ENST00000580556 TIMM13Q9Y5L4 95 aaPredicted RBP12.92□□□□□ -0.34
CCDC84-209ENST00000580556 EPG5Q9HCE0 2579 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 CEP250Q9BV73 2442 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 C2orf16Q68DN1 1984 aa12.92□□□□□ -0.34
CCDC84-209ENST00000580556 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.91□□□□□ -0.34
CCDC84-209ENST00000580556 F8VZ95 297 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 STK25O00506 426 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 CFHP08603 1231 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 PAEPP09466 180 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 CD58P19256 250 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 NDST1P52848 882 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 TSPY1Q01534 308 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 SMARCB1Q12824 385 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 CTXN3Q4LDR2 81 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 GJB7Q6PEY0 223 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 CACNA2D4Q7Z3S7 1137 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.91□□□□□ -0.34
CCDC84-209ENST00000580556 OSTM1Q86WC4 334 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 FAM71AQ8IYT1 594 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 CRYBG2Q8N1P7 616 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 OR6B3Q8NGW1 331 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 OR10T2Q8NGX3 314 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 WHAMMQ8TF30 809 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 SLC22A17Q8WUG5 538 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 NT5C1AQ9BXI3 368 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 EMILIN2Q9BXX0 1053 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 GPR88Q9GZN0 384 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 ZCWPW1Q9H0M4 648 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 KIAA1257Q9ULG3 409 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 MAFFQ9ULX9 164 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 OTOGLQ3ZCN5 2332 aa12.91□□□□□ -0.34
CCDC84-209ENST00000580556 TPRP12270 2363 aaKnown RBP12.91□□□□□ -0.34
CCDC84-209ENST00000580556 A8MXQ7 604 aa12.9□□□□□ -0.34
CCDC84-209ENST00000580556 GYPCP04921 128 aa12.9□□□□□ -0.34
CCDC84-209ENST00000580556 RAD23BP54727 409 aa12.9□□□□□ -0.34
CCDC84-209ENST00000580556 RAPGEF1Q13905 1077 aa12.9□□□□□ -0.34
CCDC84-209ENST00000580556 DRAP1Q14919 205 aaPredicted RBP12.9□□□□□ -0.34
CCDC84-209ENST00000580556 MAPRE1Q15691 268 aaKnown RBP12.9□□□□□ -0.34
CCDC84-209ENST00000580556 ARHGAP44Q17R89 818 aa12.9□□□□□ -0.34
CCDC84-209ENST00000580556 RSPO4Q2I0M5 234 aaPredicted RBP12.9□□□□□ -0.34
CCDC84-209ENST00000580556 INTS6LQ5JSJ4 861 aaKnown RBP12.9□□□□□ -0.34
CCDC84-209ENST00000580556 PRSS55Q6UWB4 352 aaPredicted RBP12.9□□□□□ -0.34
CCDC84-209ENST00000580556 DCP1BQ8IZD4 617 aaKnown RBP12.9□□□□□ -0.34
CCDC84-209ENST00000580556 B3GALNT2Q8NCR0 500 aa12.9□□□□□ -0.34
CCDC84-209ENST00000580556 BAP1Q92560 729 aa12.9□□□□□ -0.34
CCDC84-209ENST00000580556 PKMYT1Q99640 499 aa12.9□□□□□ -0.34
CCDC84-209ENST00000580556 SYT15Q9BQS2 421 aa12.9□□□□□ -0.34
CCDC84-209ENST00000580556 CLSTN3Q9BQT9 956 aa12.9□□□□□ -0.34
CCDC84-209ENST00000580556 NUCKS1Q9H1E3 243 aaKnown RBP12.9□□□□□ -0.34
CCDC84-209ENST00000580556 HMGXB4Q9UGU5 601 aa12.9□□□□□ -0.34
CCDC84-209ENST00000580556 AJAP1Q9UKB5 411 aaPredicted RBP12.9□□□□□ -0.34
CCDC84-209ENST00000580556 CA14Q9ULX7 337 aa12.9□□□□□ -0.34
CCDC84-209ENST00000580556 CAPN11Q9UMQ6 739 aa12.9□□□□□ -0.34
CCDC84-209ENST00000580556 NME7Q9Y5B8 376 aa12.9□□□□□ -0.34
CCDC84-209ENST00000580556 PCDHB4Q9Y5E5 795 aa12.9□□□□□ -0.34
CCDC84-209ENST00000580556 CDY1Q9Y6F8 540 aa12.9□□□□□ -0.34
CCDC84-209ENST00000580556 FANCMQ8IYD8 2048 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 FOXN3O00409 490 aaPredicted RBP12.89□□□□□ -0.35
CCDC84-209ENST00000580556 C2CD2LO14523 706 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 TEX28O15482 410 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 ADCY5O95622 1261 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 ADH1AP07327 375 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 DCNP07585 359 aaKnown RBP12.89□□□□□ -0.35
CCDC84-209ENST00000580556 TPM1P09493 284 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 CNPP09543 421 aaKnown RBP12.89□□□□□ -0.35
CCDC84-209ENST00000580556 LMO2P25791 158 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 SOX5P35711 763 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 ZBED6P86452 979 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 TBX2Q13207 712 aaPredicted RBP12.89□□□□□ -0.35
CCDC84-209ENST00000580556 GPR17Q13304 367 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 RAB33AQ14088 237 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 ARID5BQ14865 1188 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 NFE2Q16621 373 aaPredicted RBP12.89□□□□□ -0.35
CCDC84-209ENST00000580556 MEA1Q16626 185 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 TPGS2Q68CL5 300 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 FAM171BQ6P995 826 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 TMEM270Q6UE05 265 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 CCDC149Q6ZUS6 474 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 GPR149Q86SP6 731 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 SLC4A11Q8NBS3 891 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 RBBP8NLQ8NC74 664 aaPredicted RBP12.89□□□□□ -0.35
CCDC84-209ENST00000580556 ZNF397Q8NF99 534 aaPredicted RBP12.89□□□□□ -0.35
CCDC84-209ENST00000580556 MYCBPAPQ8TBZ2 947 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 C2orf15Q8WU43 125 aaKnown RBP12.89□□□□□ -0.35
CCDC84-209ENST00000580556 SYN2Q92777 582 aaPredicted RBP12.89□□□□□ -0.35
CCDC84-209ENST00000580556 ACSF2Q96CM8 615 aaPredicted RBP12.89□□□□□ -0.35
CCDC84-209ENST00000580556 TMEM176AQ96HP8 235 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 SPAG5Q96R06 1193 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 TWNKQ96RR1 684 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 ELOVL4Q9GZR5 314 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 SEMA4AQ9H3S1 761 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 NLRC4Q9NPP4 1024 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 DZANK1Q9NVP4 752 aa12.89□□□□□ -0.35
CCDC84-209ENST00000580556 HSFX1Q9UBD0 423 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms