RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 AMACRQ9UHK6 382 aa15.63■□□□□ 0.09
CDK5RAP3-218ENST00000580391 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.63■□□□□ 0.09
CDK5RAP3-218ENST00000580391 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.63■□□□□ 0.09
CDK5RAP3-218ENST00000580391 GOLGA6L10A0A0M3HER8 536 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 F8W810 466 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 INPPL1O15357 1258 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 MCM3P25205 808 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 SIX1Q15475 284 aaPredicted RBP15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 ATP13A4Q4VNC1 1196 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 TRNP1Q6NT89 227 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 CD300LGQ6UXG3 332 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 KATNAL2Q8IYT4 538 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 FUKQ8N0W3 1084 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 PRELID2Q8N945 189 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 FNIP1Q8TF40 1166 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 RUBCNQ92622 972 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 SEZ6LQ9BYH1 1024 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 LCMT1Q9UIC8 334 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 TTC3P53804 2025 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 CLDN5O00501 218 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 GRAP2O75791 330 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 B3GAT3O94766 335 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 ITGB1P05556 798 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 GUCY2DQ02846 1103 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 CLUL1Q15846 466 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 MDH1BQ5I0G3 518 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 OLFML1Q6UWY5 402 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 ANKS1BQ7Z6G8 1248 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 CCDC50Q8IVM0 306 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 ARFGAP1Q8N6T3 406 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 DBF4BQ8NFT6 615 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 ACSF2Q96CM8 615 aaPredicted RBP15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 PLVAPQ9BX97 442 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 B3GNT5Q9BYG0 378 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 SLITRK6Q9H5Y7 841 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 CRTAC1Q9NQ79 661 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 VWA8A3KMH1 1905 aa15.62■□□□□ 0.09
CDK5RAP3-218ENST00000580391 FNDC1Q4ZHG4 1894 aaPredicted RBP15.61■□□□□ 0.09
CDK5RAP3-218ENST00000580391 PAPSS1O43252 624 aaPredicted RBP15.61■□□□□ 0.09
CDK5RAP3-218ENST00000580391 PHF2O75151 1096 aa15.61■□□□□ 0.09
CDK5RAP3-218ENST00000580391 LRCH4O75427 683 aa15.61■□□□□ 0.09
CDK5RAP3-218ENST00000580391 SASH3O75995 380 aa15.61■□□□□ 0.09
CDK5RAP3-218ENST00000580391 EOMESO95936 686 aa15.61■□□□□ 0.09
CDK5RAP3-218ENST00000580391 HSPA6P17066 643 aa15.61■□□□□ 0.09
CDK5RAP3-218ENST00000580391 PTPN1P18031 435 aaKnown RBP15.61■□□□□ 0.09
CDK5RAP3-218ENST00000580391 FLT3P36888 993 aa15.61■□□□□ 0.09
CDK5RAP3-218ENST00000580391 MNX1P50219 401 aaPredicted RBP15.61■□□□□ 0.09
CDK5RAP3-218ENST00000580391 TCTN1Q2MV58 587 aa15.61■□□□□ 0.09
CDK5RAP3-218ENST00000580391 GLB1LQ6UWU2 654 aa15.61■□□□□ 0.09
CDK5RAP3-218ENST00000580391 CCNI2Q6ZMN8 369 aaPredicted RBP15.61■□□□□ 0.09
CDK5RAP3-218ENST00000580391 TMEM110Q86TL2 294 aa15.61■□□□□ 0.09
CDK5RAP3-218ENST00000580391 TMEM86AQ8N2M4 240 aa15.61■□□□□ 0.09
CDK5RAP3-218ENST00000580391 SYT15Q9BQS2 421 aa15.61■□□□□ 0.09
CDK5RAP3-218ENST00000580391 FTHL17Q9BXU8 183 aa15.61■□□□□ 0.09
CDK5RAP3-218ENST00000580391 DNAI2Q9GZS0 605 aa15.61■□□□□ 0.09
CDK5RAP3-218ENST00000580391 MIS12Q9H081 205 aa15.61■□□□□ 0.09
CDK5RAP3-218ENST00000580391 EPB41L5Q9HCM4 733 aa15.61■□□□□ 0.09
CDK5RAP3-218ENST00000580391 PI4K2BG5E9Z4 385 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 PITPNM1O00562 1244 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 TTI1O43156 1089 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 KRT1P04264 644 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 FAM163BP0C2L3 166 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 RARAP10276 462 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 ODC1P11926 461 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 FAM189BP81408 668 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 SLC25A11Q02978 314 aaKnown RBP15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 TAF5Q15542 800 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 PLEKHG4Q58EX7 1191 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 PAQR9Q6ZVX9 377 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 ZNF280BQ86YH2 543 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 CLEC4CQ8WTT0 213 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 STK32AQ8WU08 396 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 CASKIN2Q8WXE0 1202 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 SCLYQ96I15 445 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 HNRNPABQ99729 332 aaKnown RBP15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 GDF3Q9NR23 364 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 PATJQ8NI35 1801 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 FSCN2O14926 492 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 DDHD2O94830 711 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 RALAP11233 206 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 TNFRSF8P28908 595 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 LHX1P48742 406 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 TRADDQ15628 312 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 TTC27Q6P3X3 843 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 SCUBE3Q8IX30 993 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 EXD1Q8NHP7 514 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 RNF25Q96BH1 459 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 UROC1Q96N76 676 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 RTP3Q9BQQ7 232 aa15.6■□□□□ 0.09
CDK5RAP3-218ENST00000580391 C2CD4BA6NLJ0 364 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 BEST1O76090 585 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 LCP1P13796 627 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 GPD1P21695 349 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 IL1R2P27930 398 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 PLA2G4AP47712 749 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 CARSP49589 748 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 SLC6A3Q01959 620 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 SMTNL2Q2TAL5 461 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 RAB6CQ53S08 254 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 NOMO2Q5JPE7 1267 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms