RNA–Protein interactions for RNA: ENST00000580238.5

ATG13-226, Transcript of autophagy related 13, humanhuman

TSL 4

Gene ATG13, Length 624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-226ENST00000580238 LRRC10BA6NIK2 292 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 F8VP50 259 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 RNF225M0QZC1 329 aaPredicted RBP17.9■□□□□ 0.46
ATG13-226ENST00000580238 NOL4O94818 638 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 MYL4P12829 197 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 GJA1P17302 382 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 CEBPBP17676 345 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 GRIK1P39086 918 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 COPB1P53618 953 aaKnown RBP17.9■□□□□ 0.46
ATG13-226ENST00000580238 VEPH1Q14D04 833 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 GAREM2Q75VX8 874 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 PDZD4Q76G19 769 aaPredicted RBP17.9■□□□□ 0.46
ATG13-226ENST00000580238 OTOP3Q7RTS5 596 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 ITIH5Q86UX2 942 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 NPAS3Q8IXF0 933 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 TDRD5Q8NAT2 981 aaKnown RBP17.9■□□□□ 0.46
ATG13-226ENST00000580238 ZMIZ2Q8NF64 920 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 SHKBP1Q8TBC3 707 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 FAM200AQ8TCP9 573 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 ING5Q8WYH8 240 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 FGF13Q92913 245 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 SPATA17Q96L03 361 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 C8orf48Q96LL4 319 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 KCNK16Q96T55 309 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 HNRNPABQ99729 332 aaKnown RBP17.9■□□□□ 0.46
ATG13-226ENST00000580238 CBX8Q9HC52 389 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 APEX2Q9UBZ4 518 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 MRPS23Q9Y3D9 190 aaKnown RBP17.9■□□□□ 0.46
ATG13-226ENST00000580238 NR2E1Q9Y466 385 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 TRIOO75962 3097 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 OBSL1O75147 1896 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 DENND4CQ5VZ89 1909 aa17.9■□□□□ 0.46
ATG13-226ENST00000580238 MYO10Q9HD67 2058 aa17.89■□□□□ 0.45
ATG13-226ENST00000580238 PATJQ8NI35 1801 aa17.89■□□□□ 0.45
ATG13-226ENST00000580238 SLC38A8A6NNN8 435 aa17.89■□□□□ 0.45
ATG13-226ENST00000580238 BEST1O76090 585 aa17.89■□□□□ 0.45
ATG13-226ENST00000580238 GBP2P32456 591 aaPredicted RBP17.89■□□□□ 0.45
ATG13-226ENST00000580238 ZNF132P52740 706 aa17.89■□□□□ 0.45
ATG13-226ENST00000580238 YWHAEP62258 255 aaKnown RBP17.89■□□□□ 0.45
ATG13-226ENST00000580238 PPP1R26Q5T8A7 1209 aaPredicted RBP17.89■□□□□ 0.45
ATG13-226ENST00000580238 CYP4A22Q5TCH4 519 aa17.89■□□□□ 0.45
ATG13-226ENST00000580238 TMEM270Q6UE05 265 aa17.89■□□□□ 0.45
ATG13-226ENST00000580238 TMEM150AQ86TG1 271 aa17.89■□□□□ 0.45
ATG13-226ENST00000580238 ZDHHC14Q8IZN3 488 aa17.89■□□□□ 0.45
ATG13-226ENST00000580238 LEMD2Q8NC56 503 aa17.89■□□□□ 0.45
ATG13-226ENST00000580238 CYFIP2Q96F07 1278 aa17.89■□□□□ 0.45
ATG13-226ENST00000580238 SMARCD1Q96GM5 515 aa17.89■□□□□ 0.45
ATG13-226ENST00000580238 SMOQ99835 787 aa17.89■□□□□ 0.45
ATG13-226ENST00000580238 MED10Q9BTT4 135 aa17.89■□□□□ 0.45
ATG13-226ENST00000580238 CSNK1G1Q9HCP0 422 aa17.89■□□□□ 0.45
ATG13-226ENST00000580238 UBE2TQ9NPD8 197 aaPredicted RBP17.89■□□□□ 0.45
ATG13-226ENST00000580238 KRT82Q9NSB4 513 aa17.89■□□□□ 0.45
ATG13-226ENST00000580238 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.89■□□□□ 0.45
ATG13-226ENST00000580238 EPS15L1Q9UBC2 864 aa17.89■□□□□ 0.45
ATG13-226ENST00000580238 CDH7Q9ULB5 785 aa17.89■□□□□ 0.45
ATG13-226ENST00000580238 CNTN6Q9UQ52 1028 aa17.89■□□□□ 0.45
ATG13-226ENST00000580238 MYH10P35580 1976 aa17.89■□□□□ 0.45
ATG13-226ENST00000580238 ZNF638Q14966 1978 aaKnown RBP17.89■□□□□ 0.45
ATG13-226ENST00000580238 A0A1W2PRU2 124 aa17.88■□□□□ 0.45
ATG13-226ENST00000580238 SMTNL1A8MU46 457 aa17.88■□□□□ 0.45
ATG13-226ENST00000580238 PES1O00541 588 aaKnown RBP17.88■□□□□ 0.45
ATG13-226ENST00000580238 TRIM66O15016 1216 aa17.88■□□□□ 0.45
ATG13-226ENST00000580238 MICAL2O94851 1124 aa17.88■□□□□ 0.45
ATG13-226ENST00000580238 CSH1P0DML2 217 aa17.88■□□□□ 0.45
ATG13-226ENST00000580238 CSH2P0DML3 217 aa17.88■□□□□ 0.45
ATG13-226ENST00000580238 LAMP2P13473 410 aa17.88■□□□□ 0.45
ATG13-226ENST00000580238 ADORA2BP29275 332 aa17.88■□□□□ 0.45
ATG13-226ENST00000580238 SSTR3P32745 418 aaPredicted RBP17.88■□□□□ 0.45
ATG13-226ENST00000580238 USP46P62068 366 aa17.88■□□□□ 0.45
ATG13-226ENST00000580238 ARHGAP17Q68EM7 881 aa17.88■□□□□ 0.45
ATG13-226ENST00000580238 LUZP1Q86V48 1076 aa17.88■□□□□ 0.45
ATG13-226ENST00000580238 KHSRPQ92945 711 aaKnown RBP eCLIP17.88■□□□□ 0.45
ATG13-226ENST00000580238 ACSF2Q96CM8 615 aaPredicted RBP17.88■□□□□ 0.45
ATG13-226ENST00000580238 MYRFLQ96LU7 910 aa17.88■□□□□ 0.45
ATG13-226ENST00000580238 HEXIM2Q96MH2 286 aaKnown RBP17.88■□□□□ 0.45
ATG13-226ENST00000580238 ZSWIM1Q9BR11 485 aa17.88■□□□□ 0.45
ATG13-226ENST00000580238 PCDHB4Q9Y5E5 795 aa17.88■□□□□ 0.45
ATG13-226ENST00000580238 ZNF197O14709 1029 aa17.87■□□□□ 0.45
ATG13-226ENST00000580238 TNFRSF10BO14763 440 aa17.87■□□□□ 0.45
ATG13-226ENST00000580238 TADA3O75528 432 aa17.87■□□□□ 0.45
ATG13-226ENST00000580238 AP1G2O75843 785 aa17.87■□□□□ 0.45
ATG13-226ENST00000580238 CALCAP01258 141 aa17.87■□□□□ 0.45
ATG13-226ENST00000580238 F11P03951 625 aa17.87■□□□□ 0.45
ATG13-226ENST00000580238 GABRR2P28476 465 aa17.87■□□□□ 0.45
ATG13-226ENST00000580238 TEAD2Q15562 447 aa17.87■□□□□ 0.45
ATG13-226ENST00000580238 STXBP5Q5T5C0 1151 aa17.87■□□□□ 0.45
ATG13-226ENST00000580238 CLEC20AQ6ZU45 233 aa17.87■□□□□ 0.45
ATG13-226ENST00000580238 RNF135Q8IUD6 432 aa17.87■□□□□ 0.45
ATG13-226ENST00000580238 PLCD3Q8N3E9 789 aa17.87■□□□□ 0.45
ATG13-226ENST00000580238 RBBP8NLQ8NC74 664 aaPredicted RBP17.87■□□□□ 0.45
ATG13-226ENST00000580238 ST13P5Q8NFI4 369 aaPredicted RBP17.87■□□□□ 0.45
ATG13-226ENST00000580238 TFAP2BQ92481 460 aa17.87■□□□□ 0.45
ATG13-226ENST00000580238 JAKMIP2Q96AA8 810 aa17.87■□□□□ 0.45
ATG13-226ENST00000580238 TRMT2BQ96GJ1 504 aaKnown RBP17.87■□□□□ 0.45
ATG13-226ENST00000580238 CEP295NLQ96MC4 621 aa17.87■□□□□ 0.45
ATG13-226ENST00000580238 ZSWIM3Q96MP5 696 aa17.87■□□□□ 0.45
ATG13-226ENST00000580238 DMAP1Q9NPF5 467 aaPredicted RBP17.87■□□□□ 0.45
ATG13-226ENST00000580238 LIMD1Q9UGP4 676 aa17.87■□□□□ 0.45
ATG13-226ENST00000580238 MAGED2Q9UNF1 606 aaPredicted RBP17.87■□□□□ 0.45
ATG13-226ENST00000580238 ATP8B3O60423 1300 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms