RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 CCDC127Q96BQ5 260 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 INTS4Q96HW7 963 aaKnown RBP9.57□□□□□ -0.88
GGA3-207ENST00000578896 MMS19Q96T76 1030 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 MRPL45Q9BRJ2 306 aaKnown RBP9.57□□□□□ -0.88
GGA3-207ENST00000578896 TRIM9Q9C026 710 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 SMOC1Q9H4F8 434 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 SEMA4GQ9NTN9 838 aa9.57□□□□□ -0.88
GGA3-207ENST00000578896 DUS2Q9NX74 493 aaKnown RBP9.57□□□□□ -0.88
GGA3-207ENST00000578896 R3HCC1Q9Y3T6 440 aaKnown RBP9.57□□□□□ -0.88
GGA3-207ENST00000578896 THADAQ6YHU6 1953 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 PRR5-ARHGAP8B1AHC4 643 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 K7ELQ4 463 aaPredicted RBP9.56□□□□□ -0.88
GGA3-207ENST00000578896 TRDMT1O14717 391 aaKnown RBP9.56□□□□□ -0.88
GGA3-207ENST00000578896 DCLK1O15075 740 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 TGFB1I1O43294 461 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 PAPSS2O95340 614 aaPredicted RBP9.56□□□□□ -0.88
GGA3-207ENST00000578896 KCNA4P22459 653 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 DDX6P26196 483 aaKnown RBP eCLIP9.56□□□□□ -0.88
GGA3-207ENST00000578896 PCSK1P29120 753 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 GJA4P35212 333 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 GRIK1P39086 918 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 IFNAR2P48551 515 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 CACNA2D1P54289 1103 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 ARHGAP8P85298 464 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 ZXDBP98169 803 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 IFRD2Q12894 506 aaPredicted RBP9.56□□□□□ -0.88
GGA3-207ENST00000578896 PSMD2Q13200 908 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 ALCAMQ13740 583 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 SF3A2Q15428 464 aaKnown RBP9.56□□□□□ -0.88
GGA3-207ENST00000578896 ZNF77Q15935 545 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 DUOXA2Q1HG44 320 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 MDH1BQ5I0G3 518 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 C1orf228Q6PIY5 440 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 TRAPPC11Q7Z392 1133 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 WDR5BQ86VZ2 330 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 GPR161Q8N6U8 529 aaKnown RBP9.56□□□□□ -0.88
GGA3-207ENST00000578896 SPRYD3Q8NCJ5 442 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 ZNF507Q8TCN5 953 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 SH3RF2Q8TEC5 729 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 LEO1Q8WVC0 666 aaPredicted RBP9.56□□□□□ -0.88
GGA3-207ENST00000578896 ZNF516Q92618 1163 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 EZH1Q92800 747 aaPredicted RBP9.56□□□□□ -0.88
GGA3-207ENST00000578896 HHIPQ96QV1 700 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 P2RY13Q9BPV8 354 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 BACH2Q9BYV9 841 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 ARRDC1-AS1Q9H2J1 176 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 TNMDQ9H2S6 317 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 DPEP3Q9H4B8 488 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 ZSCAN16Q9H4T2 348 aaPredicted RBP9.56□□□□□ -0.88
GGA3-207ENST00000578896 ECT2Q9H8V3 914 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 ABCB6Q9NP58 842 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 AGPAT3Q9NRZ7 376 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 RXFP3Q9NSD7 469 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 KBTBD4Q9NVX7 518 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 GCNT4Q9P109 453 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 MAGEC2Q9UBF1 373 aaPredicted RBP9.56□□□□□ -0.88
GGA3-207ENST00000578896 SLC8A2Q9UPR5 921 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 INVSQ9Y283 1065 aa9.56□□□□□ -0.88
GGA3-207ENST00000578896 PI4KAP42356 2102 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 HELZP42694 1942 aaKnown RBP9.55□□□□□ -0.88
GGA3-207ENST00000578896 TRAV19A0A0A6YYK7 116 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 CLDN5O00501 218 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 POLR2DO15514 142 aaKnown RBP9.55□□□□□ -0.88
GGA3-207ENST00000578896 ABL1P00519 1130 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 USP17L7P0C7H9 530 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 HDCP19113 662 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 TNNI1P19237 187 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 WARSP23381 471 aaKnown RBP9.55□□□□□ -0.88
GGA3-207ENST00000578896 GNL1P36915 607 aaPredicted RBP9.55□□□□□ -0.88
GGA3-207ENST00000578896 AFMP43652 599 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 CASP4P49662 377 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 SEC13P55735 322 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 FAM160A1Q05DH4 1040 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 MYO1EQ12965 1108 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 ZNF268Q14587 947 aaPredicted RBP9.55□□□□□ -0.88
GGA3-207ENST00000578896 SNRNP35Q16560 246 aaKnown RBP9.55□□□□□ -0.88
GGA3-207ENST00000578896 EML3Q32P44 896 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 CFAP221Q4G0U5 840 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 FAM26FQ5R3K3 315 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 PRR23CQ6ZRP0 262 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 EPM2AIP1Q7L775 607 aaPredicted RBP9.55□□□□□ -0.88
GGA3-207ENST00000578896 HS2ST1Q7LGA3 356 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 LIMS2Q7Z4I7 341 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 KBTBD6Q86V97 674 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 SYNPOQ8N3V7 929 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 OR6B3Q8NGW1 331 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 RPLP0P6Q8NHW5 317 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 PLEKHO2Q8TD55 490 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 OSCP1Q8WVF1 389 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 SCFD1Q8WVM8 642 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 TRMT2BQ96GJ1 504 aaKnown RBP9.55□□□□□ -0.88
GGA3-207ENST00000578896 PCED1BQ96HM7 432 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 CHAMP1Q96JM3 812 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 MYRFLQ96LU7 910 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 CNTNAP3BQ96NU0 1288 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 CNTNAP3Q9BZ76 1288 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 RNF38Q9H0F5 515 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 GZF1Q9H116 711 aaPredicted RBP9.55□□□□□ -0.88
GGA3-207ENST00000578896 KIF9Q9HAQ2 790 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 SLC39A2Q9NP94 309 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms