RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 PROS1P07225 676 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 NOP14P78316 857 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 SF3A1Q15459 793 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 PMS2CLQ68D20 193 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 RNF43Q68DV7 783 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 RABEPKQ7Z6M1 372 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 GPD1LQ8N335 351 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 LRRC15Q8TF66 581 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 CUEDC2Q9H467 287 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 UPF2Q9HAU5 1272 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 TMLHEQ9NVH6 421 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 TNNC2P02585 160 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 ITGB3P05106 788 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 ARSAP15289 507 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 ANXA13P27216 316 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 DGKEP52429 567 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 KCNB1Q14721 858 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 C8orf34Q49A92 452 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 ZC2HC1CQ53FD0 456 aaPredicted RBP12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 RRAGBQ5VZM2 374 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 TXNDC8Q6A555 127 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 PDZD8Q8NEN9 1154 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 TSTD1Q8NFU3 115 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 OLIG1Q8TAK6 271 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 USP33Q8TEY7 942 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 DNAJC19Q96DA6 116 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 PI4K2AQ9BTU6 479 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 RXFP3Q9NSD7 469 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 TRPM5Q9NZQ8 1165 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 CGNQ9P2M7 1197 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 MMP17Q9ULZ9 603 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 CCL26Q9Y258 94 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 ANAPC1Q9H1A4 1944 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 PTPRDP23468 1912 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 TACC1O75410 805 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 CAVIN2O95810 425 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 TMEM191BP0C7N4 346 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 TFAMQ00059 246 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 LMAN2Q12907 356 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 PSMD2Q13200 908 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 CNNM4Q6P4Q7 775 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 TRMT11Q7Z4G4 463 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 WDR49Q8IV35 697 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 CCDC65Q8IXS2 484 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 TTC8Q8TAM2 541 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 FAM213AQ9BRX8 229 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 INTS13Q9NVM9 706 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 C2orf42Q9NWW7 574 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 TBC1D7Q9P0N9 293 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 TBC1D14Q9P2M4 693 aa12.03□□□□□ -0.48
SMARCE1-214ENST00000578112 EIF3DO15371 548 aaKnown RBP eCLIP12.02□□□□□ -0.49
SMARCE1-214ENST00000578112 TNFRSF4P43489 277 aa12.02□□□□□ -0.49
SMARCE1-214ENST00000578112 HNRNPDQ14103 355 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-214ENST00000578112 DHX8Q14562 1220 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-214ENST00000578112 SF3A2Q15428 464 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-214ENST00000578112 EOGTQ5NDL2 527 aa12.02□□□□□ -0.49
SMARCE1-214ENST00000578112 PKN3Q6P5Z2 889 aa12.02□□□□□ -0.49
SMARCE1-214ENST00000578112 SYCP3Q8IZU3 236 aa12.02□□□□□ -0.49
SMARCE1-214ENST00000578112 CSGALNACT2Q8N6G5 542 aa12.02□□□□□ -0.49
SMARCE1-214ENST00000578112 RPLP0P6Q8NHW5 317 aa12.02□□□□□ -0.49
SMARCE1-214ENST00000578112 SYT15Q9BQS2 421 aa12.02□□□□□ -0.49
SMARCE1-214ENST00000578112 EDEM2Q9BV94 578 aa12.02□□□□□ -0.49
SMARCE1-214ENST00000578112 FBXO2Q9UK22 296 aaPredicted RBP12.02□□□□□ -0.49
SMARCE1-214ENST00000578112 EP300Q09472 2414 aaPredicted RBP12.02□□□□□ -0.49
SMARCE1-214ENST00000578112 F5P12259 2224 aa12.02□□□□□ -0.49
SMARCE1-214ENST00000578112 ATP8B3O60423 1300 aa12.02□□□□□ -0.49
SMARCE1-214ENST00000578112 MYMKA6NI61 221 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 KHNYNO15037 678 aaKnown RBP12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 GDF9O60383 454 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 KRT37O76014 449 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 CKMP06732 381 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 CEACAM1P13688 526 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 TUBP50607 506 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 DUOXA2Q1HG44 320 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 PEAR1Q5VY43 1037 aaPredicted RBP12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 TMEM130Q8N3G9 435 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 KDF1Q8NAX2 398 aaPredicted RBP12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 SH3RF2Q8TEC5 729 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 SPACA7Q96KW9 195 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 SMG9Q9H0W8 520 aaKnown RBP12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 MAGED2Q9UNF1 606 aaPredicted RBP12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 ZNF233A6NK53 670 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 TNFRSF10BO14763 440 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 GCNT3O95395 438 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 HDCP19113 662 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 CYP2F1P24903 491 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 CUL4AQ13619 759 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 TRIM68Q6AZZ1 485 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 DENND5BQ6ZUT9 1274 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 NUDT18Q6ZVK8 323 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 OSTM1Q86WC4 334 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 TNMDQ9H2S6 317 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 MAGEF1Q9HAY2 307 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 POLMQ9NP87 494 aaPredicted RBP12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 TMEM9BQ9NQ34 198 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 SNX9Q9Y5X1 595 aa12.01□□□□□ -0.49
SMARCE1-214ENST00000578112 OTOL1A6NHN0 477 aaPredicted RBP12□□□□□ -0.49
SMARCE1-214ENST00000578112 RTN3O95197 1032 aaPredicted RBP12□□□□□ -0.49
SMARCE1-214ENST00000578112 ADH1CP00326 375 aa12□□□□□ -0.49
SMARCE1-214ENST00000578112 ATICP31939 592 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms