RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 VWA8A3KMH1 1905 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 OR6C75A6NL08 312 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 H7C4K7 107 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 VDRP11473 427 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 AOC1P19801 751 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 ANXA13P27216 316 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 TKTP29401 623 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CTNNB1P35222 781 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 PTK2Q05397 1052 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CCDC173Q0VFZ6 552 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 RAPGEF1Q13905 1077 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 STILQ15468 1287 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CNGA2Q16280 664 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 ARHGAP44Q17R89 818 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 RTP2Q5QGT7 225 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 VARS2Q5ST30 1063 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 SFMBT2Q5VUG0 894 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 HGSNATQ68CP4 663 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 ARHGAP17Q68EM7 881 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CWF19L1Q69YN2 538 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 TMEM270Q6UE05 265 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 OSTM1Q86WC4 334 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 HASPINQ8TF76 798 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 CPLX3Q8WVH0 158 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 DDX1Q92499 740 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 ELOVL4Q9GZR5 314 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 ZBP1Q9H171 429 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 SNX25Q9H3E2 840 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.84□□□□□ -0.512e-6■■■■□ 21
CDK5RAP3-204ENST00000577664 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 DDX43Q9NXZ2 648 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 HSFX1Q9UBD0 423 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 MTRRQ9UBK8 725 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 MAFFQ9ULX9 164 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 PCDHB4Q9Y5E5 795 aa11.84□□□□□ -0.51
CDK5RAP3-204ENST00000577664 MYO10Q9HD67 2058 aa11.83□□□□□ -0.51
CDK5RAP3-204ENST00000577664 FLNBO75369 2602 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 SSU72P8A0A1W2PR75 194 aa11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 A8MXQ7 604 aa11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 GOLGA6L6A8MZA4 724 aa11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 I3L4J1 428 aa11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 FSCN2O14926 492 aa11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CYP26A1O43174 497 aa11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 GFPT2O94808 682 aa11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 SERPING1P05155 500 aa11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CYP11B1P15538 503 aa11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 PTPN1P18031 435 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 RAP1GAPP47736 663 aa11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ADKP55263 362 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CREMQ03060 361 aa11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 MAPK8IP2Q13387 824 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 MAPRE1Q15691 268 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ASTE1Q2TB18 679 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 E4F1Q66K89 784 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 VPS52Q8N1B4 723 aa11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 RBBP8NLQ8NC74 664 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 OR6B3Q8NGW1 331 aa11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 EPS8L1Q8TE68 723 aa11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ZNF606Q8WXB4 792 aa11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 TWNKQ96RR1 684 aa11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ZCWPW1Q9H0M4 648 aa11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 NGRNQ9NPE2 291 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 NOCTQ9UK39 431 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 PCDHGC3Q9UN70 934 aa11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 TIMM13Q9Y5L4 95 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-204ENST00000577664 TSC2P49815 1807 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ABLIM3O94929 683 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CD58P19256 250 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CDH5P33151 784 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 GLUD2P49448 558 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 GPR17Q13304 367 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 TSR1Q2NL82 804 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 PKDCCQ504Y2 493 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 INTS6LQ5JSJ4 861 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ZNF280DQ6N043 979 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 LCLAT1Q6UWP7 414 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 SCARA5Q6ZMJ2 495 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CCDC186Q7Z3E2 898 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 SLC47A2Q86VL8 602 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 TMEM139Q8IV31 216 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 LRRC8AQ8IWT6 810 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 DCLK2Q8N568 766 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 MRPL43Q8N983 215 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 B3GALNT2Q8NCR0 500 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 SLC30A5Q8TAD4 765 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 OLIG1Q8TAK6 271 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 MYCBPAPQ8TBZ2 947 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 C2orf15Q8WU43 125 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 POF1BQ8WVV4 589 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 HNRNPABQ99729 332 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CLSTN3Q9BQT9 956 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 ZSWIM1Q9BR11 485 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 UBXN6Q9BZV1 441 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 LHX5Q9H2C1 402 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 CRTAC1Q9NQ79 661 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 MRPL17Q9NRX2 175 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 HMGXB4Q9UGU5 601 aa11.82□□□□□ -0.52
CDK5RAP3-204ENST00000577664 O00370 1275 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 MED7O43513 233 aa11.81□□□□□ -0.52
CDK5RAP3-204ENST00000577664 LCA5LO95447 670 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms