RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 ACO2Q99798 780 aaKnown RBP10.85□□□□□ -0.67
SS18-207ENST00000577636 PLA2G2FQ9BZM2 168 aa10.85□□□□□ -0.67
SS18-207ENST00000577636 IMPG2Q9BZV3 1241 aa10.85□□□□□ -0.67
SS18-207ENST00000577636 FZD8Q9H461 694 aa10.85□□□□□ -0.67
SS18-207ENST00000577636 GMEB2Q9UKD1 530 aa10.85□□□□□ -0.67
SS18-207ENST00000577636 NDRG2Q9UN36 371 aaKnown RBP10.85□□□□□ -0.67
SS18-207ENST00000577636 TNFSF13BQ9Y275 285 aa10.85□□□□□ -0.67
SS18-207ENST00000577636 PCDHGA2Q9Y5H1 932 aa10.85□□□□□ -0.67
SS18-207ENST00000577636 FHOD1Q9Y613 1164 aa10.85□□□□□ -0.67
SS18-207ENST00000577636 PRR5-ARHGAP8B1AHC4 643 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 GFPT2O94808 682 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 KIF4AO95239 1232 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 C1RP00736 705 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 HNRNPA1P09651 372 aaKnown RBP eCLIP10.84□□□□□ -0.67
SS18-207ENST00000577636 OR1D2P34982 312 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 SOX5P35711 763 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 ACOT2P49753 483 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 VAV2P52735 878 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 ARHGAP8P85298 464 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 MCL1Q07820 350 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 AMHR2Q16671 573 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 FAM187BQ17R55 369 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 PABPC1LQ4VXU2 614 aaKnown RBP10.84□□□□□ -0.67
SS18-207ENST00000577636 CCDC122Q5T0U0 273 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 IQCEQ6IPM2 695 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 SLC27A1Q6PCB7 646 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 SYT10Q6XYQ8 523 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 ZNF852Q6ZMS4 543 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 ENOSF1Q7L5Y1 443 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 IFNLR1Q8IU57 520 aaPredicted RBP10.84□□□□□ -0.67
SS18-207ENST00000577636 CGRRF1Q99675 332 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 ADPGKQ9BRR6 497 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 DDX23Q9BUQ8 820 aaKnown RBP10.84□□□□□ -0.67
SS18-207ENST00000577636 SIX2Q9NPC8 291 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 UBE2TQ9NPD8 197 aaPredicted RBP10.84□□□□□ -0.67
SS18-207ENST00000577636 HEBP1Q9NRV9 189 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 RAB20Q9NX57 234 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 SNTG2Q9NY99 539 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 ARHGAP20Q9P2F6 1191 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 DNMT3BQ9UBC3 853 aaKnown RBP10.84□□□□□ -0.67
SS18-207ENST00000577636 DNAI1Q9UI46 699 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 RAB23Q9ULC3 237 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 MRPS23Q9Y3D9 190 aaKnown RBP10.84□□□□□ -0.67
SS18-207ENST00000577636 COL4A3Q01955 1670 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 DOCK8Q8NF50 2099 aa10.84□□□□□ -0.67
SS18-207ENST00000577636 MYH11P35749 1972 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 DMXL1Q9Y485 3027 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 F8VZ95 297 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 IL18RAPO95256 599 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 PAPLNO95428 1278 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 THP07101 528 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 MCF2P10911 925 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 PRKCIP41743 596 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 PIK3CAP42336 1068 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 MAGEA1P43355 309 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 LMNB2Q03252 620 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 SPEM2Q0P670 501 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 TUSC3Q13454 348 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 GRM2Q14416 872 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 DRAP1Q14919 205 aaPredicted RBP10.83□□□□□ -0.68
SS18-207ENST00000577636 ENOX2Q16206 610 aaKnown RBP10.83□□□□□ -0.68
SS18-207ENST00000577636 ARHGAP44Q17R89 818 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 RSPO2Q6UXX9 243 aaPredicted RBP10.83□□□□□ -0.68
SS18-207ENST00000577636 PRR23BQ6ZRT6 265 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 ZNF662Q6ZS27 426 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 WDR49Q8IV35 697 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 BRSK2Q8IWQ3 736 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 NPAS3Q8IXF0 933 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 GPR65Q8IYL9 337 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 PPM1KQ8N3J5 372 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 ZBTB44Q8NCP5 570 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 PIK3R5Q8WYR1 880 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 NELL2Q99435 816 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 RTKNQ9BST9 563 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 OSBPL6Q9BZF3 934 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 GUCA1BQ9UMX6 200 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 USP20Q9Y2K6 914 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 MRPS17Q9Y2R5 130 aaKnown RBP10.83□□□□□ -0.68
SS18-207ENST00000577636 COQ4Q9Y3A0 265 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 PCDHA13Q9Y5I0 950 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 DOCK6Q96HP0 2047 aa10.83□□□□□ -0.68
SS18-207ENST00000577636 A0A1B0GUA9 196 aa10.82□□□□□ -0.68
SS18-207ENST00000577636 CTAGE9A4FU28 777 aa10.82□□□□□ -0.68
SS18-207ENST00000577636 TBC1D4O60343 1298 aa10.82□□□□□ -0.68
SS18-207ENST00000577636 LCA5LO95447 670 aa10.82□□□□□ -0.68
SS18-207ENST00000577636 TNNC2P02585 160 aa10.82□□□□□ -0.68
SS18-207ENST00000577636 RHOP08100 348 aa10.82□□□□□ -0.68
SS18-207ENST00000577636 CLTAP09496 248 aa10.82□□□□□ -0.68
SS18-207ENST00000577636 TMEM191BP0C7N4 346 aa10.82□□□□□ -0.68
SS18-207ENST00000577636 IGFBP6P24592 240 aaPredicted RBP10.82□□□□□ -0.68
SS18-207ENST00000577636 USP8P40818 1118 aa10.82□□□□□ -0.68
SS18-207ENST00000577636 MAGEA9P43362 315 aa10.82□□□□□ -0.68
SS18-207ENST00000577636 ARPP19P56211 112 aa10.82□□□□□ -0.68
SS18-207ENST00000577636 JAM2P57087 298 aa10.82□□□□□ -0.68
SS18-207ENST00000577636 CLDN10P78369 228 aa10.82□□□□□ -0.68
SS18-207ENST00000577636 POU5F1Q01860 360 aaKnown RBP10.82□□□□□ -0.68
SS18-207ENST00000577636 APBA1Q02410 837 aa10.82□□□□□ -0.68
SS18-207ENST00000577636 ADCY1Q08828 1119 aa10.82□□□□□ -0.68
SS18-207ENST00000577636 MTAPQ13126 283 aa10.82□□□□□ -0.68
SS18-207ENST00000577636 TUBB2AQ13885 445 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms