RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 MYL10Q9BUA6 226 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 PTTG2Q9NZH5 202 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 KDM6AO15550 1401 aaPredicted RBP9.17□□□□□ -0.94
CDH8-203ENST00000577390 CFAP99D6REC4 459 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 TEDDM1Q5T9Z0 273 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 CYP4A22Q5TCH4 519 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 RESP18Q5W5W9 173 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 BARGINQ6ZT62 677 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 SLC13A5Q86YT5 568 aaPredicted RBP9.17□□□□□ -0.94
CDH8-203ENST00000577390 RMDN3Q96TC7 470 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 EHD4Q9H223 541 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 SLC12A4Q9UP95 1085 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 SLC9A8Q9Y2E8 581 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 GPC6Q9Y625 555 aaPredicted RBP9.17□□□□□ -0.94
CDH8-203ENST00000577390 GRIN2DO15399 1336 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 CTSEP14091 401 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 IDO1P14902 403 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 DHTKD1Q96HY7 919 aaPredicted RBP9.17□□□□□ -0.94
CDH8-203ENST00000577390 KLHL1Q9NR64 748 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 ACADLP28330 430 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 ADORA2BP29275 332 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 ZNF157P51786 506 aaPredicted RBP9.17□□□□□ -0.94
CDH8-203ENST00000577390 MARSP56192 900 aaKnown RBP9.17□□□□□ -0.94
CDH8-203ENST00000577390 DDX39BQ13838 428 aaKnown RBP9.17□□□□□ -0.94
CDH8-203ENST00000577390 SURF1Q15526 300 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 LINC00301Q8NCQ3 95 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 ATP6V1C2Q8NEY4 427 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 TOR1AIP2Q8NFQ8 470 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 CLEC4MQ9H2X3 399 aaPredicted RBP9.17□□□□□ -0.94
CDH8-203ENST00000577390 PCDHA13Q9Y5I0 950 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 SLC16A2P36021 539 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 BNC1Q01954 994 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 NKX1-1Q15270 411 aaPredicted RBP9.17□□□□□ -0.94
CDH8-203ENST00000577390 ZSWIM7Q19AV6 140 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 PTPRN2Q92932 1015 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 KLHL4Q9C0H6 718 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 UBE2TQ9NPD8 197 aaPredicted RBP9.17□□□□□ -0.94
CDH8-203ENST00000577390 UVRAGQ9P2Y5 699 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 TELO2Q9Y4R8 837 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 ARL5CA6NH57 179 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 A8MXQ7 604 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 ATP5F1P24539 256 aaPredicted RBP9.17□□□□□ -0.94
CDH8-203ENST00000577390 ITGA9Q13797 1035 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 TRMT5Q32P41 509 aaKnown RBP9.17□□□□□ -0.94
CDH8-203ENST00000577390 C7orf25Q9BPX7 421 aa9.17□□□□□ -0.94
CDH8-203ENST00000577390 TIMM8BQ9Y5J9 83 aaPredicted RBP9.17□□□□□ -0.94
CDH8-203ENST00000577390 SAC3D1A6NKF1 404 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 AXLP30530 894 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 FNTAP49354 379 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 IST1P53990 364 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 PLIN5Q00G26 463 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 MGAT5BQ3V5L5 792 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 PDIK1LQ8N165 341 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 TSPYL6Q8N831 410 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 TBC1D10AQ9BXI6 508 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 BHLHE41Q9C0J9 482 aaPredicted RBP9.16□□□□□ -0.94
CDH8-203ENST00000577390 INTS7Q9NVH2 962 aaKnown RBP9.16□□□□□ -0.94
CDH8-203ENST00000577390 NMRK1Q9NWW6 199 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 AKAP12Q02952 1782 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 ASNA1O43681 348 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 BMP10O95393 424 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 IL2P60568 153 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 KCNJ2P63252 427 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 CSTF3Q12996 717 aaKnown RBP9.16□□□□□ -0.94
CDH8-203ENST00000577390 NDUFAF6Q330K2 333 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 ZRANB3Q5FWF4 1079 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 PRCCQ92733 491 aaPredicted RBP9.16□□□□□ -0.94
CDH8-203ENST00000577390 BRIP1Q9BX63 1249 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 CYP4F11Q9HBI6 524 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 ARHGEF10O15013 1369 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 CLASP2O75122 1294 aaKnown RBP9.16□□□□□ -0.94
CDH8-203ENST00000577390 LCP1P13796 627 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 CDH18Q13634 790 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 THNSL1Q8IYQ7 743 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 EME1Q96AY2 570 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 TESCQ96BS2 214 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 AMNQ9BXJ7 453 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 RNF181Q9P0P0 153 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 HS6ST1O60243 411 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 HSD17B3P37058 310 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 SKIV2L2P42285 1042 aaKnown RBP9.16□□□□□ -0.94
CDH8-203ENST00000577390 DEFA1P59665 94 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 DEFA3P59666 94 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 ZNF699Q32M78 642 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 IZUMO2Q6UXV1 221 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 CCDC81Q6ZN84 652 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 CHD5Q8TDI0 1954 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 QTRT2Q9H974 415 aaKnown RBP9.16□□□□□ -0.94
CDH8-203ENST00000577390 ANKRD26Q9UPS8 1709 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 TMCC2O75069 709 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 TARSP26639 723 aaKnown RBP9.16□□□□□ -0.94
CDH8-203ENST00000577390 CEBPGP53567 150 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 PLTPP55058 493 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 PTH1RQ03431 593 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 ATP1A4Q13733 1029 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 LACTB2Q53H82 288 aaPredicted RBP9.16□□□□□ -0.94
CDH8-203ENST00000577390 CENPUQ71F23 418 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 MMP19Q99542 508 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 TMBIM4Q9HC24 238 aa9.16□□□□□ -0.94
CDH8-203ENST00000577390 MCCC2Q9HCC0 563 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms