RNA–Protein interactions for RNA: ENST00000577241.1

MSI2-205, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-205ENST00000577241 SMOC2Q9H3U7 446 aa16.73■□□□□ 0.27
MSI2-205ENST00000577241 DPEP3Q9H4B8 488 aa16.73■□□□□ 0.27
MSI2-205ENST00000577241 APOBEC3GQ9HC16 384 aaKnown RBP16.73■□□□□ 0.27
MSI2-205ENST00000577241 OBP2AQ9NY56 170 aa16.73■□□□□ 0.27
MSI2-205ENST00000577241 ARIH1Q9Y4X5 557 aaPredicted RBP16.73■□□□□ 0.27
MSI2-205ENST00000577241 NME7Q9Y5B8 376 aa16.73■□□□□ 0.27
MSI2-205ENST00000577241 TECTAO75443 2155 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 NOTCH4Q99466 2003 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 DPYSL4O14531 572 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 F11P03951 625 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 CFHP08603 1231 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 PSMC3P17980 439 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 FCARP24071 287 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 PPP3CCP48454 512 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 GPR15P49685 360 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 STX17P56962 302 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 YWHAEP62258 255 aaKnown RBP16.72■□□□□ 0.27
MSI2-205ENST00000577241 GPC5P78333 572 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 CCDC142Q17RM4 750 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 CBWD6Q4V339 395 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 CT47A1Q5JQC4 288 aaPredicted RBP16.72■□□□□ 0.27
MSI2-205ENST00000577241 CBWD3Q5JTY5 395 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 CBWD5Q5RIA9 395 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 ACOT1Q86TX2 421 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 SMARCD1Q96GM5 515 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 ZSWIM3Q96MP5 696 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 PRRX2Q99811 253 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 MED10Q9BTT4 135 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 TRMT61BQ9BVS5 477 aaKnown RBP16.72■□□□□ 0.27
MSI2-205ENST00000577241 SRRTQ9BXP5 876 aaKnown RBP16.72■□□□□ 0.27
MSI2-205ENST00000577241 B3GNT5Q9BYG0 378 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 DOCK6Q96HP0 2047 aa16.72■□□□□ 0.27
MSI2-205ENST00000577241 F8VP50 259 aa16.71■□□□□ 0.27
MSI2-205ENST00000577241 CILPO75339 1184 aa16.71■□□□□ 0.27
MSI2-205ENST00000577241 COL9A1P20849 921 aa16.71■□□□□ 0.27
MSI2-205ENST00000577241 AVPR1AP37288 418 aa16.71■□□□□ 0.27
MSI2-205ENST00000577241 FMO5P49326 533 aa16.71■□□□□ 0.27
MSI2-205ENST00000577241 PDE6CP51160 858 aa16.71■□□□□ 0.27
MSI2-205ENST00000577241 CLCN5P51795 746 aa16.71■□□□□ 0.27
MSI2-205ENST00000577241 NUBP1P53384 320 aa16.71■□□□□ 0.27
MSI2-205ENST00000577241 SDHAF4Q5VUM1 108 aa16.71■□□□□ 0.27
MSI2-205ENST00000577241 POTEHQ6S545 545 aa16.71■□□□□ 0.27
MSI2-205ENST00000577241 ARID3BQ8IVW6 561 aaPredicted RBP16.71■□□□□ 0.27
MSI2-205ENST00000577241 MFSD6LQ8IWD5 586 aa16.71■□□□□ 0.27
MSI2-205ENST00000577241 TRIM59Q8IWR1 403 aa16.71■□□□□ 0.27
MSI2-205ENST00000577241 YAF2Q8IY57 180 aa16.71■□□□□ 0.27
MSI2-205ENST00000577241 SIX5Q8N196 739 aa16.71■□□□□ 0.27
MSI2-205ENST00000577241 SEMA4DQ92854 862 aa16.71■□□□□ 0.27
MSI2-205ENST00000577241 DNASE1L2Q92874 299 aa16.71■□□□□ 0.27
MSI2-205ENST00000577241 IRF7Q92985 503 aa16.71■□□□□ 0.27
MSI2-205ENST00000577241 DMAP1Q9NPF5 467 aaPredicted RBP16.71■□□□□ 0.27
MSI2-205ENST00000577241 TRPV5Q9NQA5 729 aa16.71■□□□□ 0.27
MSI2-205ENST00000577241 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.71■□□□□ 0.27
MSI2-205ENST00000577241 HEPACAM2A8MVW5 462 aa16.7■□□□□ 0.26
MSI2-205ENST00000577241 RTN3O95197 1032 aaPredicted RBP16.7■□□□□ 0.26
MSI2-205ENST00000577241 MBD3O95983 291 aa16.7■□□□□ 0.26
MSI2-205ENST00000577241 PFKLP17858 780 aa16.7■□□□□ 0.26
MSI2-205ENST00000577241 TBXAS1P24557 533 aaPredicted RBP16.7■□□□□ 0.26
MSI2-205ENST00000577241 CYP4F8P98187 520 aa16.7■□□□□ 0.26
MSI2-205ENST00000577241 PRKCQQ04759 706 aa16.7■□□□□ 0.26
MSI2-205ENST00000577241 TPD52L1Q16890 204 aaPredicted RBP16.7■□□□□ 0.26
MSI2-205ENST00000577241 PHLDB3Q6NSJ2 640 aa16.7■□□□□ 0.26
MSI2-205ENST00000577241 FAM35AQ86V20 835 aa16.7■□□□□ 0.26
MSI2-205ENST00000577241 MON1AQ86VX9 555 aa16.7■□□□□ 0.26
MSI2-205ENST00000577241 CMTM8Q8IZV2 173 aa16.7■□□□□ 0.26
MSI2-205ENST00000577241 ELMO3Q96BJ8 720 aa16.7■□□□□ 0.26
MSI2-205ENST00000577241 TTLL2Q9BWV7 592 aa16.7■□□□□ 0.26
MSI2-205ENST00000577241 ZNF518BQ9C0D4 1074 aa16.7■□□□□ 0.26
MSI2-205ENST00000577241 BRD9Q9H8M2 597 aa16.7■□□□□ 0.26
MSI2-205ENST00000577241 KIF9Q9HAQ2 790 aa16.7■□□□□ 0.26
MSI2-205ENST00000577241 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.7■□□□□ 0.267e-11■■■■■ 260.8
MSI2-205ENST00000577241 ARHGEF3Q9NR81 526 aa16.7■□□□□ 0.26
MSI2-205ENST00000577241 COMMD8Q9NX08 183 aa16.7■□□□□ 0.26
MSI2-205ENST00000577241 NRG2O14511 850 aaPredicted RBP16.69■□□□□ 0.26
MSI2-205ENST00000577241 ZNF263O14978 683 aa16.69■□□□□ 0.26
MSI2-205ENST00000577241 PRKCSHP14314 528 aaPredicted RBP16.69■□□□□ 0.26
MSI2-205ENST00000577241 CD58P19256 250 aa16.69■□□□□ 0.26
MSI2-205ENST00000577241 RFX1P22670 979 aa16.69■□□□□ 0.26
MSI2-205ENST00000577241 ERCC5P28715 1186 aaPredicted RBP16.69■□□□□ 0.26
MSI2-205ENST00000577241 STXBP5Q5T5C0 1151 aa16.69■□□□□ 0.26
MSI2-205ENST00000577241 ASTLQ6HA08 431 aaPredicted RBP16.69■□□□□ 0.26
MSI2-205ENST00000577241 VITQ6UXI7 678 aa16.69■□□□□ 0.26
MSI2-205ENST00000577241 TMEM150AQ86TG1 271 aa16.69■□□□□ 0.26
MSI2-205ENST00000577241 FUKQ8N0W3 1084 aa16.69■□□□□ 0.26
MSI2-205ENST00000577241 NUP93Q8N1F7 819 aa16.69■□□□□ 0.26
MSI2-205ENST00000577241 CELF5Q8N6W0 485 aaKnown RBP16.69■□□□□ 0.26
MSI2-205ENST00000577241 ST13P5Q8NFI4 369 aaPredicted RBP16.69■□□□□ 0.26
MSI2-205ENST00000577241 SLITRK1Q96PX8 696 aa16.69■□□□□ 0.26
MSI2-205ENST00000577241 HNRNPABQ99729 332 aaKnown RBP16.69■□□□□ 0.26
MSI2-205ENST00000577241 SLC46A2Q9BY10 475 aa16.69■□□□□ 0.26
MSI2-205ENST00000577241 PLA2G2FQ9BZM2 168 aa16.69■□□□□ 0.26
MSI2-205ENST00000577241 CISHQ9NSE2 258 aa16.69■□□□□ 0.26
MSI2-205ENST00000577241 THG1LQ9NWX6 298 aaKnown RBP16.69■□□□□ 0.26
MSI2-205ENST00000577241 TRPM5Q9NZQ8 1165 aa16.69■□□□□ 0.26
MSI2-205ENST00000577241 CA14Q9ULX7 337 aa16.69■□□□□ 0.26
MSI2-205ENST00000577241 CLDN5O00501 218 aa16.68■□□□□ 0.26
MSI2-205ENST00000577241 STK25O00506 426 aa16.68■□□□□ 0.26
MSI2-205ENST00000577241 CHADO15335 359 aa16.68■□□□□ 0.26
MSI2-205ENST00000577241 AP1G2O75843 785 aa16.68■□□□□ 0.26
MSI2-205ENST00000577241 AFPP02771 609 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms