RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 PTP4A2Q12974 167 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 ERICH1Q86X53 443 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 SLC35F5Q8WV83 523 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 AUTS2Q8WXX7 1259 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 DUSP16Q9BY84 665 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 TSGA10Q9BZW7 698 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 YBX2Q9Y2T7 364 aaKnown RBP25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 CDY1Q9Y6F8 540 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 MACROD2A1Z1Q3 448 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 GOLGA6L9A6NEM1 432 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 ADAM12O43184 909 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 KRT86O43790 486 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 AP1G2O75843 785 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 BEST1O76090 585 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 URODP06132 367 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 CPB1P15086 417 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 NPR3P17342 541 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 BDNFP23560 247 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 CYP4A22Q5TCH4 519 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 PPP1R2P3Q6NXS1 205 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 PMF1Q6P1K2 205 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 LLGL2Q6P1M3 1020 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 ZNF662Q6ZS27 426 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 SPATA2LQ8IUW3 424 aaPredicted RBP25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 PGLYRP2Q96PD5 576 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 ST7Q9NRC1 585 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 TMEM30AQ9NV96 361 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 MYO1AQ9UBC5 1043 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 SALL4Q9UJQ4 1053 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 PCDHA11Q9Y5I1 949 aa25.41■■□□□ 1.66
ATPAF1-213ENST00000574428 PLXNA4Q9HCM2 1894 aa25.4■■□□□ 1.66
ATPAF1-213ENST00000574428 PIK3R2O00459 728 aa25.4■■□□□ 1.66
ATPAF1-213ENST00000574428 SETSIPP0DME0 302 aa25.4■■□□□ 1.66
ATPAF1-213ENST00000574428 RRM1P23921 792 aa25.4■■□□□ 1.66
ATPAF1-213ENST00000574428 GPC5P78333 572 aa25.4■■□□□ 1.66
ATPAF1-213ENST00000574428 C1QBPQ07021 282 aaKnown RBP25.4■■□□□ 1.66
ATPAF1-213ENST00000574428 CLEC20AQ6ZU45 233 aa25.4■■□□□ 1.66
ATPAF1-213ENST00000574428 FBXO22Q8NEZ5 403 aa25.4■■□□□ 1.66
ATPAF1-213ENST00000574428 SMARCD1Q96GM5 515 aa25.4■■□□□ 1.66
ATPAF1-213ENST00000574428 NOX5Q96PH1 765 aa25.4■■□□□ 1.66
ATPAF1-213ENST00000574428 ALG13Q9NP73 1137 aaKnown RBP25.4■■□□□ 1.66
ATPAF1-213ENST00000574428 ABI2Q9NYB9 513 aaPredicted RBP25.4■■□□□ 1.66
ATPAF1-213ENST00000574428 RWDD3Q9Y3V2 267 aa25.4■■□□□ 1.66
ATPAF1-213ENST00000574428 PAXBP1Q9Y5B6 917 aa25.4■■□□□ 1.66
ATPAF1-213ENST00000574428 BACE2Q9Y5Z0 518 aa25.4■■□□□ 1.66
ATPAF1-213ENST00000574428 ERBB2P04626 1255 aa25.39■■□□□ 1.66
ATPAF1-213ENST00000574428 MAP3K7CLP57077 242 aa25.39■■□□□ 1.66
ATPAF1-213ENST00000574428 C4orf50Q6ZRC1 276 aa25.39■■□□□ 1.66
ATPAF1-213ENST00000574428 TRIM11Q96F44 468 aa25.39■■□□□ 1.66
ATPAF1-213ENST00000574428 SMOQ99835 787 aa25.39■■□□□ 1.66
ATPAF1-213ENST00000574428 OXCT2Q9BYC2 517 aaPredicted RBP25.39■■□□□ 1.66
ATPAF1-213ENST00000574428 IRX2Q9BZI1 471 aaPredicted RBP25.39■■□□□ 1.66
ATPAF1-213ENST00000574428 SYNCQ9H7C4 482 aa25.39■■□□□ 1.66
ATPAF1-213ENST00000574428 CNOT8Q9UFF9 292 aaKnown RBP25.39■■□□□ 1.66
ATPAF1-213ENST00000574428 NCANO14594 1321 aa25.39■■□□□ 1.65
ATPAF1-213ENST00000574428 SLC8A3P57103 927 aa25.39■■□□□ 1.65
ATPAF1-213ENST00000574428 NFE2Q16621 373 aaPredicted RBP25.39■■□□□ 1.65
ATPAF1-213ENST00000574428 C16orf45Q96MC5 204 aaPredicted RBP25.39■■□□□ 1.65
ATPAF1-213ENST00000574428 CLSTN3Q9BQT9 956 aa25.39■■□□□ 1.65
ATPAF1-213ENST00000574428 ZBP1Q9H171 429 aa25.39■■□□□ 1.65
ATPAF1-213ENST00000574428 XPO1O14980 1071 aaKnown RBP25.38■■□□□ 1.65
ATPAF1-213ENST00000574428 CALB1P05937 261 aa25.38■■□□□ 1.65
ATPAF1-213ENST00000574428 CYP2F1P24903 491 aa25.38■■□□□ 1.65
ATPAF1-213ENST00000574428 OR1D2P34982 312 aa25.38■■□□□ 1.65
ATPAF1-213ENST00000574428 SLC8B1Q6J4K2 584 aa25.38■■□□□ 1.65
ATPAF1-213ENST00000574428 MSANTD4Q8NCY6 345 aa25.38■■□□□ 1.65
ATPAF1-213ENST00000574428 VCPIP1Q96JH7 1222 aa25.38■■□□□ 1.65
ATPAF1-213ENST00000574428 KCNK16Q96T55 309 aa25.38■■□□□ 1.65
ATPAF1-213ENST00000574428 PLVAPQ9BX97 442 aa25.38■■□□□ 1.65
ATPAF1-213ENST00000574428 PBX4Q9BYU1 374 aa25.38■■□□□ 1.65
ATPAF1-213ENST00000574428 MRPL17Q9NRX2 175 aaKnown RBP25.38■■□□□ 1.65
ATPAF1-213ENST00000574428 STK39Q9UEW8 545 aa25.38■■□□□ 1.65
ATPAF1-213ENST00000574428 E5RJQ4 531 aa25.37■■□□□ 1.65
ATPAF1-213ENST00000574428 BUB1O43683 1085 aa25.37■■□□□ 1.65
ATPAF1-213ENST00000574428 CAPN15O75808 1086 aa25.37■■□□□ 1.65
ATPAF1-213ENST00000574428 CSPG5O95196 566 aa25.37■■□□□ 1.65
ATPAF1-213ENST00000574428 CYP1A2P05177 515 aa25.37■■□□□ 1.65
ATPAF1-213ENST00000574428 MYBL1P10243 752 aa25.37■■□□□ 1.65
ATPAF1-213ENST00000574428 PLA2G4AP47712 749 aa25.37■■□□□ 1.65
ATPAF1-213ENST00000574428 GPR17Q13304 367 aa25.37■■□□□ 1.65
ATPAF1-213ENST00000574428 LIN9Q5TKA1 542 aa25.37■■□□□ 1.65
ATPAF1-213ENST00000574428 RNF19BQ6ZMZ0 732 aa25.37■■□□□ 1.65
ATPAF1-213ENST00000574428 PIGZQ86VD9 579 aa25.37■■□□□ 1.65
ATPAF1-213ENST00000574428 ATAD1Q8NBU5 361 aa25.37■■□□□ 1.65
ATPAF1-213ENST00000574428 ZMIZ2Q8NF64 920 aa25.37■■□□□ 1.65
ATPAF1-213ENST00000574428 RFFLQ8WZ73 363 aa25.37■■□□□ 1.65
ATPAF1-213ENST00000574428 C18orf8Q96DM3 657 aa25.37■■□□□ 1.65
ATPAF1-213ENST00000574428 SLC4A5Q9BY07 1137 aa25.37■■□□□ 1.65
ATPAF1-213ENST00000574428 PTPRDP23468 1912 aa25.37■■□□□ 1.65
ATPAF1-213ENST00000574428 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 BTNL10A8MVZ5 291 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 GABBR2O75899 941 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 CA8P35219 290 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 ROR1Q01973 937 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 TAP1Q03518 808 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 TTC9BQ8N6N2 239 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 SLC35G2Q8TBE7 412 aa25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 IPO4Q8TEX9 1081 aaKnown RBP25.36■■□□□ 1.65
ATPAF1-213ENST00000574428 STK32AQ8WU08 396 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms