RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 SMYD4Q8IYR2 804 aaPredicted RBP10.68□□□□□ -0.7
RPA1-206ENST00000573994 TTC8Q8TAM2 541 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 TMEM174Q8WUU8 243 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 DEPDC1BQ8WUY9 529 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 DNASE1L2Q92874 299 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 ZFYVE19Q96K21 471 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 LRRC3BQ96PB8 259 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 SNX25Q9H3E2 840 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 DPEP3Q9H4B8 488 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 ABCB6Q9NP58 842 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.68□□□□□ -0.73e-6■■■■■ 37.3
RPA1-206ENST00000573994 DMAC2Q9NW81 257 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 NDRG2Q9UN36 371 aaKnown RBP10.68□□□□□ -0.7
RPA1-206ENST00000573994 NME7Q9Y5B8 376 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 PIAS3Q9Y6X2 628 aa10.68□□□□□ -0.7
RPA1-206ENST00000573994 SLC38A8A6NNN8 435 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 ZNF263O14978 683 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 CALUO43852 315 aaPredicted RBP10.67□□□□□ -0.7
RPA1-206ENST00000573994 TADA3O75528 432 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 RHOBTB3O94955 611 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 ZNF202O95125 648 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 KIF20AO95235 890 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 BDNFP23560 247 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 SOX9P48436 509 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 NLRP12P59046 1061 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 DLG4P78352 724 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 CYP27A1Q02318 531 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 PNOCQ13519 176 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 ZNF699Q32M78 642 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 WDR72Q3MJ13 1102 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 TXNDC8Q6A555 127 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 ZNF852Q6ZMS4 543 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 SLC9A9Q8IVB4 645 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 MFSD6LQ8IWD5 586 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 OR6B3Q8NGW1 331 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 IRF7Q92985 503 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 CCDC47Q96A33 483 aaKnown RBP10.67□□□□□ -0.7
RPA1-206ENST00000573994 E2F7Q96AV8 911 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 CCDC34Q96HJ3 373 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 XYLT2Q9H1B5 865 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 TASP1Q9H6P5 420 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 TRPC7Q9HCX4 862 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 ZMYM5Q9UJ78 669 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 CDH9Q9ULB4 789 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 CCL26Q9Y258 94 aa10.67□□□□□ -0.7
RPA1-206ENST00000573994 TCHHQ07283 1943 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 SHISA7A6NL88 538 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 C3orf80F5H4A9 247 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 ARNTLO00327 626 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 PDXKO00764 312 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 GFRA3O60609 400 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 NOL4O94818 638 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 VNN1O95497 513 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 FAM163BP0C2L3 166 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 TRIM49P0CI25 452 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 TRIM49CP0CI26 452 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 CSH1P0DML2 217 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 CSH2P0DML3 217 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 NR2F2P24468 414 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 GNL1P36915 607 aaPredicted RBP10.66□□□□□ -0.7
RPA1-206ENST00000573994 CACNA2D1P54289 1103 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 CDH8P55286 799 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 RPL10AP62906 217 aaKnown RBP10.66□□□□□ -0.7
RPA1-206ENST00000573994 TNK2Q07912 1038 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 NCOA4Q13772 614 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 CFAP221Q4G0U5 840 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 FAM171BQ6P995 826 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 C4orf50Q6ZRC1 276 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 MAB21L3Q8N8X9 362 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 TTC16Q8NEE8 873 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 PARD3BQ8TEW8 1205 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 ERCC4Q92889 916 aaPredicted RBP10.66□□□□□ -0.7
RPA1-206ENST00000573994 SYAP1Q96A49 352 aaPredicted RBP10.66□□□□□ -0.7
RPA1-206ENST00000573994 PCED1BQ96HM7 432 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 FUBP3Q96I24 572 aaKnown RBP eCLIP10.66□□□□□ -0.7
RPA1-206ENST00000573994 SLC46A2Q9BY10 475 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 BCO2Q9BYV7 579 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 SPATA6Q9NWH7 488 aaPredicted RBP10.66□□□□□ -0.7
RPA1-206ENST00000573994 FRMD4BQ9Y2L6 1034 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 R4GN57 208 aa10.66□□□□□ -0.7
RPA1-206ENST00000573994 WDR87Q6ZQQ6 2873 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 COL4A2P08572 1712 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 GOLGA6L4A6NEF3 574 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 A8MXQ7 604 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 CLDN5O00501 218 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 CHADO15335 359 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 TACC1O75410 805 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 AKAP3O75969 853 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 STAU1O95793 577 aaKnown RBP10.65□□□□□ -0.7
RPA1-206ENST00000573994 F11P03951 625 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 C4BPAP04003 597 aaKnown RBP10.65□□□□□ -0.7
RPA1-206ENST00000573994 CCNE1P24864 410 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 ATICP31939 592 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 AVPR1AP37288 418 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 GGCXP38435 758 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 GRIK1P39086 918 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 NBL1P41271 181 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 PIK3CAP42336 1068 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 MAGEA11P43364 429 aa10.65□□□□□ -0.7
RPA1-206ENST00000573994 KPNA1P52294 538 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms