RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 CCDC26Q8TAB7 109 aa13.57□□□□□ -0.24
PRPF8-207ENST00000573681 MYCBPAPQ8TBZ2 947 aa13.57□□□□□ -0.24
PRPF8-207ENST00000573681 SLC2A14Q8TDB8 520 aa13.57□□□□□ -0.24
PRPF8-207ENST00000573681 KCTD13Q8WZ19 329 aa13.57□□□□□ -0.24
PRPF8-207ENST00000573681 SUSD3Q96L08 255 aa13.57□□□□□ -0.24
PRPF8-207ENST00000573681 RBM12Q9NTZ6 932 aaKnown RBP13.57□□□□□ -0.24
PRPF8-207ENST00000573681 ASNSD1Q9NWL6 643 aa13.57□□□□□ -0.24
PRPF8-207ENST00000573681 DDX56Q9NY93 547 aaKnown RBP13.57□□□□□ -0.24
PRPF8-207ENST00000573681 MTUS1Q9ULD2 1270 aa13.57□□□□□ -0.24
PRPF8-207ENST00000573681 PCDHB8Q9UN66 801 aa13.57□□□□□ -0.24
PRPF8-207ENST00000573681 USTQ9Y2C2 406 aa13.57□□□□□ -0.24
PRPF8-207ENST00000573681 E5RJQ4 531 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 XPO1O14980 1071 aaKnown RBP13.56□□□□□ -0.24
PRPF8-207ENST00000573681 ALDH2P05091 517 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 CCDC130P13994 396 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 IGFBP6P24592 240 aaPredicted RBP13.56□□□□□ -0.24
PRPF8-207ENST00000573681 PSMA2P25787 234 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 SSR1P43307 286 aaKnown RBP13.56□□□□□ -0.24
PRPF8-207ENST00000573681 PLA2G4AP47712 749 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 ZNF143P52747 638 aaPredicted RBP13.56□□□□□ -0.24
PRPF8-207ENST00000573681 COPS2P61201 443 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 RNASELQ05823 741 aaKnown RBP13.56□□□□□ -0.24
PRPF8-207ENST00000573681 ZNF211Q13398 564 aaPredicted RBP13.56□□□□□ -0.24
PRPF8-207ENST00000573681 MAPRE1Q15691 268 aaKnown RBP13.56□□□□□ -0.24
PRPF8-207ENST00000573681 TRIM60Q495X7 471 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 MAATS1Q7Z4T9 603 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 SLC13A5Q86YT5 568 aaPredicted RBP13.56□□□□□ -0.24
PRPF8-207ENST00000573681 COLGALT2Q8IYK4 626 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 FUKQ8N0W3 1084 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 EXD1Q8NHP7 514 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 HNRNPLLQ8WVV9 542 aaKnown RBP13.56□□□□□ -0.24
PRPF8-207ENST00000573681 RUNDC3BQ96NL0 473 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 SYT15Q9BQS2 421 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 PAAF1Q9BRP4 392 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 MED10Q9BTT4 135 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 LRRC1Q9BTT6 524 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 COLEC11Q9BWP8 271 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 EPC1Q9H2F5 836 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 SLITRK6Q9H5Y7 841 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 TMEM39AQ9NV64 488 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 TBC1D13Q9NVG8 400 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 SMARCAL1Q9NZC9 954 aa13.56□□□□□ -0.24
PRPF8-207ENST00000573681 CCDC151A5D8V7 595 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 F8VP50 259 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 FSCN2O14926 492 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 HCRTO43612 131 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 ATP2C2O75185 946 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 RNF8O76064 485 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 DDHD2O94830 711 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 GJB6O95452 261 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 KRT7P08729 469 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 GPD1P21695 349 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 ACAT1P24752 427 aaKnown RBP13.55□□□□□ -0.24
PRPF8-207ENST00000573681 CTCFP49711 727 aaPredicted RBP13.55□□□□□ -0.24
PRPF8-207ENST00000573681 RGS7P49802 495 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 TAS2R40P59535 323 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 OGDHQ02218 1023 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 IKBKEQ14164 716 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 EFHC1Q5JVL4 640 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 FAM102AQ5T9C2 384 aaPredicted RBP13.55□□□□□ -0.24
PRPF8-207ENST00000573681 C8orf74Q6P047 294 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 FAM171BQ6P995 826 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 FAM183BPQ6ZVS7 135 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 POLNQ7Z5Q5 900 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 ZNF280BQ86YH2 543 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 NPAS4Q8IUM7 802 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 JOSD2Q8TAC2 188 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 CASD1Q96PB1 797 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 KRT12Q99456 494 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 LPIN3Q9BQK8 851 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 CNPY3Q9BT09 278 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 TMEM106CQ9BVX2 250 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 AP1M1Q9BXS5 423 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 MRPL9Q9BYD2 267 aaKnown RBP13.55□□□□□ -0.24
PRPF8-207ENST00000573681 B3GNT5Q9BYG0 378 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 C11orf49Q9H6J7 331 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 CRTAC1Q9NQ79 661 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 METTL5Q9NRN9 209 aaKnown RBP13.55□□□□□ -0.24
PRPF8-207ENST00000573681 HOMER3Q9NSC5 361 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 CACNG4Q9UBN1 327 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 TJP2Q9UDY2 1190 aa13.55□□□□□ -0.24
PRPF8-207ENST00000573681 TIMM13Q9Y5L4 95 aaPredicted RBP13.55□□□□□ -0.24
PRPF8-207ENST00000573681 C2CD4BA6NLJ0 364 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 PAPSS1O43252 624 aaPredicted RBP13.54□□□□□ -0.24
PRPF8-207ENST00000573681 SART1O43290 800 aaKnown RBP13.54□□□□□ -0.24
PRPF8-207ENST00000573681 ATP8B1O43520 1251 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 TADA2AO75478 443 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 FAM200BP0CF97 657 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 PDGFRAP16234 1089 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 NPR3P17342 541 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 PCK1P35558 622 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 BRCC3P46736 316 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 OR1G1P47890 313 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 MARCKSL1P49006 195 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 CCL23P55773 120 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 ZNF252P-AS1Q0IIN9 211 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 ODF2Q5BJF6 829 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 MDH1BQ5I0G3 518 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 KIAA0319Q5VV43 1072 aa13.54□□□□□ -0.24
PRPF8-207ENST00000573681 OVOS1Q6IE37 1185 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms