RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 PDZD4Q76G19 769 aaPredicted RBP16.82■□□□□ 0.28
CHD3-215ENST00000572750 ERMP1Q7Z2K6 904 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 UNC93AQ86WB7 457 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 TMC8Q8IU68 726 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 ARHGEF19Q8IW93 802 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 SCN4BQ8IWT1 228 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 PPM1KQ8N3J5 372 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 FBXL6Q8N531 539 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 WHAMMQ8TF30 809 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 KAT5Q92993 513 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 PSMG2Q969U7 264 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 TCEAL4Q96EI5 215 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 TNIP3Q96KP6 325 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 ZNF512Q96ME7 567 aaPredicted RBP16.82■□□□□ 0.28
CHD3-215ENST00000572750 NT5C1BQ96P26 610 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 TUBGCP2Q9BSJ2 902 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 CRACR2AQ9BSW2 395 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 FUCA2Q9BTY2 467 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 B3GNT5Q9BYG0 378 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 ELOVL4Q9GZR5 314 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 ZNF334Q9HCZ1 680 aaPredicted RBP16.82■□□□□ 0.28
CHD3-215ENST00000572750 TMEM30AQ9NV96 361 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 FANCLQ9NW38 375 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 MYH10P35580 1976 aa16.82■□□□□ 0.28
CHD3-215ENST00000572750 EEF1GP26641 437 aaKnown RBP16.81■□□□□ 0.28
CHD3-215ENST00000572750 CACNA2D1P54289 1103 aa16.81■□□□□ 0.28
CHD3-215ENST00000572750 NFKBIBQ15653 356 aa16.81■□□□□ 0.28
CHD3-215ENST00000572750 ZSCAN23Q3MJ62 389 aa16.81■□□□□ 0.28
CHD3-215ENST00000572750 PRSS36Q5K4E3 855 aa16.81■□□□□ 0.28
CHD3-215ENST00000572750 OTOP3Q7RTS5 596 aa16.81■□□□□ 0.28
CHD3-215ENST00000572750 FAM35AQ86V20 835 aa16.81■□□□□ 0.28
CHD3-215ENST00000572750 C12orf29Q8N999 325 aa16.81■□□□□ 0.28
CHD3-215ENST00000572750 ATOH1Q92858 354 aaPredicted RBP16.81■□□□□ 0.28
CHD3-215ENST00000572750 FAXDC2Q96IV6 333 aa16.81■□□□□ 0.28
CHD3-215ENST00000572750 PRRX2Q99811 253 aa16.81■□□□□ 0.28
CHD3-215ENST00000572750 MED10Q9BTT4 135 aa16.81■□□□□ 0.28
CHD3-215ENST00000572750 NT5C1AQ9BXI3 368 aa16.81■□□□□ 0.28
CHD3-215ENST00000572750 KRT82Q9NSB4 513 aa16.81■□□□□ 0.28
CHD3-215ENST00000572750 TAB2Q9NYJ8 693 aa16.81■□□□□ 0.28
CHD3-215ENST00000572750 USTQ9Y2C2 406 aa16.81■□□□□ 0.28
CHD3-215ENST00000572750 MRPS23Q9Y3D9 190 aaKnown RBP16.81■□□□□ 0.28
CHD3-215ENST00000572750 MYO16Q9Y6X6 1858 aa16.8■□□□□ 0.28
CHD3-215ENST00000572750 PROB1E7EW31 1015 aa16.8■□□□□ 0.28
CHD3-215ENST00000572750 PES1O00541 588 aaKnown RBP16.8■□□□□ 0.28
CHD3-215ENST00000572750 LETM1O95202 739 aaPredicted RBP16.8■□□□□ 0.28
CHD3-215ENST00000572750 GJA1P17302 382 aa16.8■□□□□ 0.28
CHD3-215ENST00000572750 TBXAS1P24557 533 aaPredicted RBP16.8■□□□□ 0.28
CHD3-215ENST00000572750 MAGEA11P43364 429 aa16.8■□□□□ 0.28
CHD3-215ENST00000572750 EPHA5P54756 1037 aa16.8■□□□□ 0.28
CHD3-215ENST00000572750 RPL10AP62906 217 aaKnown RBP16.8■□□□□ 0.28
CHD3-215ENST00000572750 APBA1Q02410 837 aa16.8■□□□□ 0.28
CHD3-215ENST00000572750 MTMR3Q13615 1198 aa16.8■□□□□ 0.28
CHD3-215ENST00000572750 NCAPHQ15003 741 aa16.8■□□□□ 0.28
CHD3-215ENST00000572750 SKOR2Q2VWA4 1001 aaPredicted RBP16.8■□□□□ 0.28
CHD3-215ENST00000572750 VWA3BQ502W6 1294 aa16.8■□□□□ 0.28
CHD3-215ENST00000572750 TRIM65Q6PJ69 517 aa16.8■□□□□ 0.28
CHD3-215ENST00000572750 RRAGAQ7L523 313 aa16.8■□□□□ 0.28
CHD3-215ENST00000572750 DNAJB7Q7Z6W7 309 aaPredicted RBP16.8■□□□□ 0.28
CHD3-215ENST00000572750 ITIH5Q86UX2 942 aa16.8■□□□□ 0.28
CHD3-215ENST00000572750 NPAS3Q8IXF0 933 aa16.8■□□□□ 0.28
CHD3-215ENST00000572750 FUKQ8N0W3 1084 aa16.8■□□□□ 0.28
CHD3-215ENST00000572750 EHBP1Q8NDI1 1231 aa16.8■□□□□ 0.28
CHD3-215ENST00000572750 ST13P5Q8NFI4 369 aaPredicted RBP16.8■□□□□ 0.28
CHD3-215ENST00000572750 SLC2A14Q8TDB8 520 aa16.8■□□□□ 0.28
CHD3-215ENST00000572750 FGF13Q92913 245 aa16.8■□□□□ 0.28
CHD3-215ENST00000572750 ACSF2Q96CM8 615 aaPredicted RBP16.8■□□□□ 0.28
CHD3-215ENST00000572750 LRRC3Q9BY71 257 aa16.8■□□□□ 0.28
CHD3-215ENST00000572750 NAT10Q9H0A0 1025 aaKnown RBP16.8■□□□□ 0.28
CHD3-215ENST00000572750 NDST4Q9H3R1 872 aa16.8■□□□□ 0.28
CHD3-215ENST00000572750 DENND4CQ5VZ89 1909 aa16.8■□□□□ 0.28
CHD3-215ENST00000572750 ATP8B3O60423 1300 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 F8VP50 259 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 H0Y858 1186 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 ADORA2BP29275 332 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 GRIK1P39086 918 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 RAD23BP54727 409 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 ZXDAP98168 799 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 KRT31Q15323 416 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 TAF12Q16514 161 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 CYP4A22Q5TCH4 519 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 VSTM1Q6UX27 236 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 GBP6Q6ZN66 633 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 PAQR9Q6ZVX9 377 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 CRYBG2Q8N1P7 616 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 UBR7Q8N806 425 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 SLC4A11Q8NBS3 891 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 SHKBP1Q8TBC3 707 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 SMARCD1Q96GM5 515 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 BPIFA3Q9BQP9 254 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 HSD3B7Q9H2F3 369 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 AVENQ9NQS1 362 aaPredicted RBP16.79■□□□□ 0.28
CHD3-215ENST00000572750 CDH7Q9ULB5 785 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 MAGED2Q9UNF1 606 aaPredicted RBP16.79■□□□□ 0.28
CHD3-215ENST00000572750 ASB3Q9Y575 518 aa16.79■□□□□ 0.28
CHD3-215ENST00000572750 ZNF638Q14966 1978 aaKnown RBP16.78■□□□□ 0.28
CHD3-215ENST00000572750 CHD6Q8TD26 2715 aa16.78■□□□□ 0.28
CHD3-215ENST00000572750 NUP210Q8TEM1 1887 aaPredicted RBP16.78■□□□□ 0.28
CHD3-215ENST00000572750 A0A1W2PRU2 124 aa16.78■□□□□ 0.28
CHD3-215ENST00000572750 GTPBP10A4D1E9 387 aaKnown RBP16.78■□□□□ 0.28
CHD3-215ENST00000572750 PRR23AA6NEV1 266 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms