RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 ERICH6BQ5W0A0 696 aa10.23□□□□□ -0.77
CIITA-208ENST00000572665 HEATR6Q6AI08 1181 aaKnown RBP10.23□□□□□ -0.77
CIITA-208ENST00000572665 C15orf39Q6ZRI6 1047 aa10.23□□□□□ -0.77
CIITA-208ENST00000572665 CCDC149Q6ZUS6 474 aa10.23□□□□□ -0.77
CIITA-208ENST00000572665 OTOP3Q7RTS5 596 aa10.23□□□□□ -0.77
CIITA-208ENST00000572665 KREMEN2Q8NCW0 462 aa10.23□□□□□ -0.77
CIITA-208ENST00000572665 SHKBP1Q8TBC3 707 aa10.23□□□□□ -0.77
CIITA-208ENST00000572665 STAMQ92783 540 aa10.23□□□□□ -0.77
CIITA-208ENST00000572665 HAS1Q92839 578 aa10.23□□□□□ -0.77
CIITA-208ENST00000572665 Q96M66 194 aa10.23□□□□□ -0.77
CIITA-208ENST00000572665 DNAJC7Q99615 494 aa10.23□□□□□ -0.77
CIITA-208ENST00000572665 COLEC11Q9BWP8 271 aa10.23□□□□□ -0.77
CIITA-208ENST00000572665 NFKBIZQ9BYH8 718 aa10.23□□□□□ -0.77
CIITA-208ENST00000572665 POMKQ9H5K3 350 aa10.23□□□□□ -0.77
CIITA-208ENST00000572665 TTC12Q9H892 705 aaPredicted RBP10.23□□□□□ -0.77
CIITA-208ENST00000572665 GIT1Q9Y2X7 761 aa10.23□□□□□ -0.77
CIITA-208ENST00000572665 ZMYM2Q9UBW7 1377 aa10.23□□□□□ -0.77
CIITA-208ENST00000572665 ANKRD34BA5PLL1 514 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 C2CD4DB7Z1M9 353 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 SLITRK3O94933 977 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 CBX7O95931 251 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 C1RP00736 705 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 POMCP01189 267 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 SOD2P04179 222 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 NAT2P11245 290 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 SP100P23497 879 aaPredicted RBP10.22□□□□□ -0.77
CIITA-208ENST00000572665 AVPR2P30518 371 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 OR1G1P47890 313 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 AK2P54819 239 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 PTENP60484 403 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 CTTNQ14247 550 aaKnown RBP10.22□□□□□ -0.77
CIITA-208ENST00000572665 PTPN14Q15678 1187 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 SLC10A6Q3KNW5 377 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 MCPH1Q8NEM0 835 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 ERMNQ8TAM6 284 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 SLC22A17Q8WUG5 538 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 GTF3C6Q969F1 213 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 ZNF669Q96BR6 464 aaPredicted RBP10.22□□□□□ -0.77
CIITA-208ENST00000572665 ASIC4Q96FT7 647 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 EIF2AK1Q9BQI3 630 aaKnown RBP10.22□□□□□ -0.77
CIITA-208ENST00000572665 CSRNP2Q9H175 543 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 EPN3Q9H201 632 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 MFSD1Q9H3U5 465 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.22□□□□□ -0.77
CIITA-208ENST00000572665 RGL1Q9NZL6 768 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 DNAJB4Q9UDY4 337 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 IPPQ9Y573 584 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 MYO10Q9HD67 2058 aa10.22□□□□□ -0.77
CIITA-208ENST00000572665 DENND4AQ7Z401 1863 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 NRP1O14786 923 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 INPPL1O15357 1258 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 DYRK3O43781 588 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 TSPAN1O60635 241 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 DDHD2O94830 711 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 EPCAMP16422 314 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 HOXA11P31270 313 aaPredicted RBP10.21□□□□□ -0.77
CIITA-208ENST00000572665 GLUD2P49448 558 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 CLCN4P51793 760 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 SPIRE1Q08AE8 756 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 ORC2Q13416 577 aaPredicted RBP10.21□□□□□ -0.77
CIITA-208ENST00000572665 GPR149Q86SP6 731 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 JAZF1Q86VZ6 243 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 TMEM173Q86WV6 379 aaPredicted RBP10.21□□□□□ -0.77
CIITA-208ENST00000572665 ZNF280BQ86YH2 543 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 ZBTB8OSQ8IWT0 167 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 GPR65Q8IYL9 337 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 DTWD2Q8NBA8 298 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 HDAC7Q8WUI4 952 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 AUTS2Q8WXX7 1259 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 KLHL5Q96PQ7 755 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 RPS6KC1Q96S38 1066 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 HSD17B14Q9BPX1 270 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 HERC2P3Q9BVR0 1158 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 OSBPL1AQ9BXW6 950 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 C2orf40Q9H1Z8 148 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 MINDY3Q9H8M7 445 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 PRMT7Q9NVM4 692 aaPredicted RBP10.21□□□□□ -0.77
CIITA-208ENST00000572665 WRAP73Q9P2S5 460 aaPredicted RBP10.21□□□□□ -0.77
CIITA-208ENST00000572665 ZNF451Q9Y4E5 1061 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 U3KQE9 123 aa10.21□□□□□ -0.77
CIITA-208ENST00000572665 C5orf42Q9H799 3197 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 TLDC2A0PJX2 215 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 ARL5CA6NH57 179 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 GLUD1P00367 558 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 CNPP09543 421 aaKnown RBP10.2□□□□□ -0.78
CIITA-208ENST00000572665 CD247P20963 164 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 MLH1P40692 756 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 TXKP42681 527 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 RARRES1P49788 294 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 GRIK3Q13003 919 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 TCEAL1Q15170 157 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 CPSF6Q16630 551 aaKnown RBP eCLIP10.2□□□□□ -0.78
CIITA-208ENST00000572665 UBXN11Q5T124 520 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 SLC27A1Q6PCB7 646 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 TMC5Q6UXY8 1006 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 SPATC1Q76KD6 591 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 APBB1IPQ7Z5R6 666 aaPredicted RBP10.2□□□□□ -0.78
CIITA-208ENST00000572665 DIS3L2Q8IYB7 885 aaKnown RBP10.2□□□□□ -0.78
CIITA-208ENST00000572665 COLGALT2Q8IYK4 626 aa10.2□□□□□ -0.78
CIITA-208ENST00000572665 MFSD4AQ8N468 514 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms