RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 PTPN2P17706 415 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 ADORA2BP29275 332 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 PGFP49763 221 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 CYP4F8P98187 520 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 MYL5Q02045 173 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 TEAD2Q15562 447 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 NFE2Q16621 373 aaPredicted RBP7.43□□□□□ -1.22
SMG6-209ENST00000571442 WDR44Q5JSH3 913 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 PPP1R26Q5T8A7 1209 aaPredicted RBP7.43□□□□□ -1.22
SMG6-209ENST00000571442 IER5LQ5T953 404 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 TRIM65Q6PJ69 517 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 CYP26C1Q6V0L0 522 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 RTL10Q7L3V2 364 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 GPRIN1Q7Z2K8 1008 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 UNC93AQ86WB7 457 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 RNF135Q8IUD6 432 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 GPIHBP1Q8IV16 184 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 SCN4BQ8IWT1 228 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 PPM1KQ8N3J5 372 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 SLC2A14Q8TDB8 520 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 C2orf15Q8WU43 125 aaKnown RBP7.43□□□□□ -1.22
SMG6-209ENST00000571442 TFAP2BQ92481 460 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 PSMG2Q969U7 264 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 RSPRY1Q96DX4 576 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 MCRS1Q96EZ8 462 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 FUBP3Q96I24 572 aaKnown RBP eCLIP7.43□□□□□ -1.22
SMG6-209ENST00000571442 ZNF512Q96ME7 567 aaPredicted RBP7.43□□□□□ -1.22
SMG6-209ENST00000571442 NT5C1BQ96P26 610 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 NT5C1AQ9BXI3 368 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 PLA2G2FQ9BZM2 168 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 IMPG2Q9BZV3 1241 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 GPR88Q9GZN0 384 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 VPS16Q9H269 839 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 NDST4Q9H3R1 872 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 CBX8Q9HC52 389 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 ABCB6Q9NP58 842 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 AVENQ9NQS1 362 aaPredicted RBP7.43□□□□□ -1.22
SMG6-209ENST00000571442 KRT82Q9NSB4 513 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 HSFX1Q9UBD0 423 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 MAGEC2Q9UBF1 373 aaPredicted RBP7.43□□□□□ -1.22
SMG6-209ENST00000571442 PRKAG3Q9UGI9 489 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 LIMD1Q9UGP4 676 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 MUTYHQ9UIF7 546 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 MAFFQ9ULX9 164 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 FAM50BQ9Y247 325 aa7.43□□□□□ -1.22
SMG6-209ENST00000571442 TNFRSF10BO14763 440 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 NARSO43776 548 aaKnown RBP7.42□□□□□ -1.22
SMG6-209ENST00000571442 GABBR2O75899 941 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 F11P03951 625 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 CFHP08603 1231 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 LAMP2P13473 410 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 P4HA1P13674 534 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 FCARP24071 287 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 BRD2P25440 801 aaKnown RBP7.42□□□□□ -1.22
SMG6-209ENST00000571442 GABRR2P28476 465 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 GBP2P32456 591 aaPredicted RBP7.42□□□□□ -1.22
SMG6-209ENST00000571442 GRIK1P39086 918 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 MAGEA11P43364 429 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 ALDH1A3P47895 512 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 TUFMP49411 452 aaKnown RBP7.42□□□□□ -1.22
SMG6-209ENST00000571442 ZNF165P49910 485 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 ZNF132P52740 706 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 COPB1P53618 953 aaKnown RBP7.42□□□□□ -1.22
SMG6-209ENST00000571442 EPHB3P54753 998 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 SMARCB1Q12824 385 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 EXOC3L4Q17RC7 722 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 IQCEQ6IPM2 695 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 ELMSAN1Q6PJG2 1045 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 PARM1Q6UWI2 310 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 C4orf50Q6ZRC1 276 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 CLEC20AQ6ZU45 233 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 PDZD4Q76G19 769 aaPredicted RBP7.42□□□□□ -1.22
SMG6-209ENST00000571442 LUZP1Q86V48 1076 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 TTC30AQ86WT1 665 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 ZDHHC14Q8IZN3 488 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 TDRD5Q8NAT2 981 aaKnown RBP7.42□□□□□ -1.22
SMG6-209ENST00000571442 SCAMP5Q8TAC9 235 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 RIN3Q8TB24 985 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 FAM200AQ8TCP9 573 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 FGF14Q92915 247 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 CYFIP2Q96F07 1278 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 TMEM176AQ96HP8 235 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 LRRC3BQ96PB8 259 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 SLC22A12Q96S37 553 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 HNRNPABQ99729 332 aaKnown RBP7.42□□□□□ -1.22
SMG6-209ENST00000571442 BPIFA3Q9BQP9 254 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 MED10Q9BTT4 135 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 UBE2TQ9NPD8 197 aaPredicted RBP7.42□□□□□ -1.22
SMG6-209ENST00000571442 ASAH2Q9NR71 780 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 EPS15L1Q9UBC2 864 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 LIMA1Q9UHB6 759 aaKnown RBP7.42□□□□□ -1.22
SMG6-209ENST00000571442 CDH7Q9ULB5 785 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 MAGED2Q9UNF1 606 aaPredicted RBP7.42□□□□□ -1.22
SMG6-209ENST00000571442 USTQ9Y2C2 406 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 MRPS23Q9Y3D9 190 aaKnown RBP7.42□□□□□ -1.22
SMG6-209ENST00000571442 PCDHB4Q9Y5E5 795 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 FHOD1Q9Y613 1164 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 NUP210Q8TEM1 1887 aaPredicted RBP7.42□□□□□ -1.22
SMG6-209ENST00000571442 TECTAO75443 2155 aa7.42□□□□□ -1.22
SMG6-209ENST00000571442 COL4A2P08572 1712 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms