RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 ECHDC2Q86YB7 292 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 ZDHHC14Q8IZN3 488 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 MAGOHBQ96A72 148 aaKnown RBP18.28■□□□□ 0.52
RPAIN-208ENST00000571043 C18orf8Q96DM3 657 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 GDAP1L1Q96MZ0 367 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 MCEEQ96PE7 176 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 RNF39Q9H2S5 420 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 PLEKHA4Q9H4M7 779 aa18.28■□□□□ 0.52
RPAIN-208ENST00000571043 ZMYND8Q9ULU4 1186 aaPredicted RBP18.28■□□□□ 0.52
RPAIN-208ENST00000571043 H3BQF6 201 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 PIRO00625 290 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 GJB6O95452 261 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 RARAP10276 462 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 ACRP10323 421 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 GPD2P43304 727 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 TAS2R40P59535 323 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 HSP90B2PQ58FF3 399 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 ALS2CLQ60I27 953 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 HACE1Q8IYU2 909 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 CRIPAKQ8N1N5 446 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 EXD1Q8NHP7 514 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 FNIP1Q8TF40 1166 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 C18orf25Q96B23 403 aaPredicted RBP18.27■□□□□ 0.51
RPAIN-208ENST00000571043 ZNF560Q96MR9 790 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 ERP44Q9BS26 406 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 APOL6Q9BWW8 343 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 MIS12Q9H081 205 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 LRRC19Q9H756 370 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 ELAC1Q9H777 363 aaKnown RBP18.27■□□□□ 0.51
RPAIN-208ENST00000571043 PARP2Q9UGN5 583 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 CYTH4Q9UIA0 394 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 SNX9Q9Y5X1 595 aa18.27■□□□□ 0.51
RPAIN-208ENST00000571043 M0QYV0 167 aa18.26■□□□□ 0.51
RPAIN-208ENST00000571043 PODXLO00592 558 aa18.26■□□□□ 0.51
RPAIN-208ENST00000571043 EFCAB14O75071 495 aa18.26■□□□□ 0.51
RPAIN-208ENST00000571043 ECHS1P30084 290 aa18.26■□□□□ 0.51
RPAIN-208ENST00000571043 COILP38432 576 aaPredicted RBP18.26■□□□□ 0.51
RPAIN-208ENST00000571043 PTGIRP43119 386 aa18.26■□□□□ 0.51
RPAIN-208ENST00000571043 PSMC1P62191 440 aaKnown RBP18.26■□□□□ 0.51
RPAIN-208ENST00000571043 ORC1Q13415 861 aa18.26■□□□□ 0.51
RPAIN-208ENST00000571043 TRADDQ15628 312 aa18.26■□□□□ 0.51
RPAIN-208ENST00000571043 DUPD1Q68J44 220 aa18.26■□□□□ 0.51
RPAIN-208ENST00000571043 JAMLQ86YT9 394 aa18.26■□□□□ 0.51
RPAIN-208ENST00000571043 FAM71BQ8TC56 605 aa18.26■□□□□ 0.51
RPAIN-208ENST00000571043 PGBD4Q96DM1 585 aa18.26■□□□□ 0.51
RPAIN-208ENST00000571043 GDAP2Q9NXN4 497 aa18.26■□□□□ 0.51
RPAIN-208ENST00000571043 PDE4DIPQ5VU43 2346 aa18.26■□□□□ 0.51
RPAIN-208ENST00000571043 PDCD11Q14690 1871 aaKnown RBP18.26■□□□□ 0.51
RPAIN-208ENST00000571043 TCRBV7S2A1N4TA0A589 114 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 PPEF2O14830 753 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 FAM153BP0C7A2 387 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 KRT3P12035 628 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 GBP1P32455 592 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 CETN2P41208 172 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 RGS19P49795 217 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 ZNF252P-AS1Q0IIN9 211 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 PDCLQ13371 301 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 HLTFQ14527 1009 aaKnown RBP eCLIP18.25■□□□□ 0.51
RPAIN-208ENST00000571043 FAM153CQ494X1 144 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 GLRA4Q5JXX5 417 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 CYP4A22Q5TCH4 519 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 CCDC137Q6PK04 289 aaKnown RBP18.25■□□□□ 0.51
RPAIN-208ENST00000571043 AGMOQ6ZNB7 445 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 XYLT1Q86Y38 959 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 MCRS1Q96EZ8 462 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 CPXM1Q96SM3 734 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 LBHD1Q9BQE6 289 aaPredicted RBP18.25■□□□□ 0.51
RPAIN-208ENST00000571043 MRPL45Q9BRJ2 306 aaKnown RBP18.25■□□□□ 0.51
RPAIN-208ENST00000571043 SYNCQ9H7C4 482 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 UBN1Q9NPG3 1134 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 HOMER3Q9NSC5 361 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 FAM153AQ9UHL3 310 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 USTQ9Y2C2 406 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 GIT1Q9Y2X7 761 aa18.25■□□□□ 0.51
RPAIN-208ENST00000571043 RALGAPA2Q2PPJ7 1873 aa18.24■□□□□ 0.51
RPAIN-208ENST00000571043 GOLGA6BA6NDN3 693 aa18.24■□□□□ 0.51
RPAIN-208ENST00000571043 MEIS3P2A8K0S8 358 aa18.24■□□□□ 0.51
RPAIN-208ENST00000571043 DAPK3O43293 454 aa18.24■□□□□ 0.51
RPAIN-208ENST00000571043 BAIAP3O94812 1187 aa18.24■□□□□ 0.51
RPAIN-208ENST00000571043 FGBP02675 491 aa18.24■□□□□ 0.51
RPAIN-208ENST00000571043 SETSIPP0DME0 302 aa18.24■□□□□ 0.51
RPAIN-208ENST00000571043 HSPA9P38646 679 aaKnown RBP18.24■□□□□ 0.51
RPAIN-208ENST00000571043 FAM193AP78312 1265 aa18.24■□□□□ 0.51
RPAIN-208ENST00000571043 OGDHQ02218 1023 aa18.24■□□□□ 0.51
RPAIN-208ENST00000571043 TTC27Q6P3X3 843 aa18.24■□□□□ 0.51
RPAIN-208ENST00000571043 ZNF365Q70YC5 407 aa18.24■□□□□ 0.51
RPAIN-208ENST00000571043 RCOR2Q8IZ40 523 aa18.24■□□□□ 0.51
RPAIN-208ENST00000571043 IPO4Q8TEX9 1081 aaKnown RBP18.24■□□□□ 0.51
RPAIN-208ENST00000571043 SLCO2A1Q92959 643 aa18.24■□□□□ 0.51
RPAIN-208ENST00000571043 LPPQ93052 612 aa18.24■□□□□ 0.51
RPAIN-208ENST00000571043 RBM41Q96IZ5 413 aaKnown RBP18.24■□□□□ 0.51
RPAIN-208ENST00000571043 DNAI2Q9GZS0 605 aa18.24■□□□□ 0.51
RPAIN-208ENST00000571043 ST7Q9NRC1 585 aa18.24■□□□□ 0.51
RPAIN-208ENST00000571043 TMEM161AQ9NX61 479 aa18.24■□□□□ 0.51
RPAIN-208ENST00000571043 KLK14Q9P0G3 267 aa18.24■□□□□ 0.51
RPAIN-208ENST00000571043 TSPAN16Q9UKR8 245 aa18.24■□□□□ 0.51
RPAIN-208ENST00000571043 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.24■□□□□ 0.51
RPAIN-208ENST00000571043 ERBB2P04626 1255 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 FAM163BP0C2L3 166 aa18.23■□□□□ 0.51
RPAIN-208ENST00000571043 LRPAP1P30533 357 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms