RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 WDR87Q6ZQQ6 2873 aa13.23□□□□□ -0.29
CTDNEP1-205ENST00000570828 MYBPHLA2RUH7 354 aa13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 SHISA7A6NL88 538 aa13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 SLC38A8A6NNN8 435 aa13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 KLRC4O43908 158 aa13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 PHACTR2O75167 634 aa13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 NOL4O94818 638 aa13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 LMNAP02545 664 aaKnown RBP13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 WARSP23381 471 aaKnown RBP13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 CCNE1P24864 410 aa13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 SYKP43405 635 aa13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 STK4Q13043 487 aa13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 BIRC3Q13489 604 aa13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 LIMS2Q7Z4I7 341 aa13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 MAML2Q8IZL2 1156 aaPredicted RBP13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 CELF5Q8N6W0 485 aaKnown RBP13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 MAB21L3Q8N8X9 362 aa13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 KIAA0895Q8NCT3 520 aa13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 MYLPFQ96A32 169 aa13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 CCDC47Q96A33 483 aaKnown RBP13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 SYAP1Q96A49 352 aaPredicted RBP13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 TRMT2BQ96GJ1 504 aaKnown RBP13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 CHAMP1Q96JM3 812 aa13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 ZFYVE19Q96K21 471 aa13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 IER2Q9BTL4 223 aa13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 SLC46A2Q9BY10 475 aa13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 SCAND2PQ9GZW5 306 aaPredicted RBP13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 SMG9Q9H0W8 520 aaKnown RBP13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 SNX25Q9H3E2 840 aa13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 HPSEQ9Y251 543 aa13.22□□□□□ -0.29
CTDNEP1-205ENST00000570828 PTPRZ1P23471 2315 aaPredicted RBP13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 ATP2C2O75185 946 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 F11P03951 625 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 PDGFRBP09619 1106 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 LMO2P25791 158 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 MAGEA11P43364 429 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 NDUFA8P51970 172 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 MLLT6P55198 1093 aaPredicted RBP13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 CYP27A1Q02318 531 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 CSTF1Q05048 431 aaKnown RBP13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 MTAPQ13126 283 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 ZNF528Q3MIS6 628 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 WDR72Q3MJ13 1102 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 TXNDC8Q6A555 127 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 FAM171BQ6P995 826 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 VSTM1Q6UX27 236 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 TMEM150AQ86TG1 271 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 ADSSL1Q8N142 457 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 OR6B3Q8NGW1 331 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 LRRC3BQ96PB8 259 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 CHRDQ9H2X0 955 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 KIF9Q9HAQ2 790 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 TRPC7Q9HCX4 862 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 CRTAC1Q9NQ79 661 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 KIAA1468Q9P260 1216 aa13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 MAGEC2Q9UBF1 373 aaPredicted RBP13.21□□□□□ -0.29
CTDNEP1-205ENST00000570828 GVINP1Q7Z2Y8 2422 aa13.21□□□□□ -0.3
CTDNEP1-205ENST00000570828 F5P12259 2224 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 SOBPA7XYQ1 873 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 SPECC1L-ADORA2AF8WAN1 911 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 KINO60870 393 aaKnown RBP13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 TACC1O75410 805 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 KIF20AO95235 890 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 STAU1O95793 577 aaKnown RBP13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 CST3P01034 146 aaPredicted RBP13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 RPN1P04843 607 aaKnown RBP13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 BDNFP23560 247 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 ANXA13P27216 316 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 ATICP31939 592 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 CTHP32929 405 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 GNL1P36915 607 aaPredicted RBP13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 GRIK1P39086 918 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 SOX9P48436 509 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 CASP4P49662 377 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 AP3M2P53677 418 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 MYL6P60660 151 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 FZD5Q13467 585 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 LRRC32Q14392 662 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 PPP2R5DQ14738 602 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 ZNF699Q32M78 642 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 MDH1BQ5I0G3 518 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 MON1AQ86VX9 555 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 RALGPS2Q86X27 583 aaPredicted RBP13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 SLC9A9Q8IVB4 645 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 FSIP1Q8NA03 581 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 TTC8Q8TAM2 541 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 MYRFLQ96LU7 910 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 MRPL45Q9BRJ2 306 aaKnown RBP13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 GZF1Q9H116 711 aaPredicted RBP13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 LMAN1LQ9HAT1 526 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 PRMT8Q9NR22 394 aaPredicted RBP13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 TDP1Q9NUW8 608 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 GTSE1Q9NYZ3 720 aa13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 NXF1Q9UBU9 619 aaKnown RBP13.2□□□□□ -0.3
CTDNEP1-205ENST00000570828 FAM186AA6NE01 2351 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 TRAV19A0A0A6YYK7 116 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 FAM237AA0A1B0GTK4 181 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 A0A1W2PQ27 194 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 A0A1W2PQ64 194 aa13.19□□□□□ -0.3
CTDNEP1-205ENST00000570828 A0A1W2PQD8 194 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms