RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 ATXN7L2Q5T6C5 722 aaPredicted RBP4.35□□□□□ -1.71
UBR1-211ENST00000569971 CCDC70Q6NSX1 233 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 FBXO38Q6PIJ6 1188 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 USP49Q70CQ1 688 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 GPRIN1Q7Z2K8 1008 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 SUGP1Q8IWZ8 645 aaKnown RBP4.35□□□□□ -1.71
UBR1-211ENST00000569971 ZFPM1Q8IX07 1006 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 CLASRPQ8N2M8 674 aaKnown RBP4.35□□□□□ -1.71
UBR1-211ENST00000569971 FITM2Q8N6M3 262 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 FANCBQ8NB91 859 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 GLIS1Q8NBF1 620 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 FAM46DQ8NEK8 389 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 CYP2W1Q8TAV3 490 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 IPO4Q8TEX9 1081 aaKnown RBP4.35□□□□□ -1.71
UBR1-211ENST00000569971 TRAPPC12Q8WVT3 735 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 RAPGEF4Q8WZA2 1011 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 TFAP2CQ92754 450 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 DDX17Q92841 729 aaKnown RBP4.35□□□□□ -1.71
UBR1-211ENST00000569971 NEIL1Q96FI4 390 aaPredicted RBP4.35□□□□□ -1.71
UBR1-211ENST00000569971 LTV1Q96GA3 475 aaPredicted RBP4.35□□□□□ -1.71
UBR1-211ENST00000569971 VKORC1Q9BQB6 163 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 CPPED1Q9BRF8 314 aaPredicted RBP4.35□□□□□ -1.71
UBR1-211ENST00000569971 PAGR1Q9BTK6 254 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 SPON1Q9HCB6 807 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 TM7SF3Q9NS93 570 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 DACT1Q9NYF0 836 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 FAM30AQ9NZY2 134 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 IGSF9Q9P2J2 1179 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 MID2Q9UJV3 735 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 HDAC5Q9UQL6 1122 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 KIF7Q2M1P5 1343 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 ROCK2O75116 1388 aaKnown RBP4.35□□□□□ -1.71
UBR1-211ENST00000569971 USP47Q96K76 1375 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 SPATA31E1Q6ZUB1 1445 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 UHRF1BP1LA0JNW5 1464 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.35□□□□□ -1.71
UBR1-211ENST00000569971 SYCP2Q9BX26 1530 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 DUOX2Q9NRD8 1548 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 UNC13BO14795 1591 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 TTC37Q6PGP7 1564 aa4.35□□□□□ -1.71
UBR1-211ENST00000569971 A0A087WZ62 844 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 PRR5-ARHGAP8B1AHC4 643 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 RAB27BO00194 218 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 PIP5K1BO14986 540 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 CDC14BO60729 498 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 A1BGP04217 495 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 ITGB1P05556 798 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 PIM1P11309 404 aaPredicted RBP4.34□□□□□ -1.71
UBR1-211ENST00000569971 VEGFAP15692 232 aaPredicted RBP4.34□□□□□ -1.71
UBR1-211ENST00000569971 IL1R2P27930 398 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 GABRB3P28472 473 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 SERPINF1P36955 418 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 KRTAP1-1Q07627 177 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 POSTNQ15063 836 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 TAF5Q15542 800 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 RAB30Q15771 203 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 FKBP15Q5T1M5 1219 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 FAM160B1Q5W0V3 765 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 EFCAB12Q6NXP0 572 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 JMJD6Q6NYC1 403 aaPredicted RBP4.34□□□□□ -1.71
UBR1-211ENST00000569971 MMS22LQ6ZRQ5 1243 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 MED25Q71SY5 747 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 FAM83AQ86UY5 434 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 TAX1BP1Q86VP1 789 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 YAF2Q8IY57 180 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 PDPRQ8NCN5 879 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 CCDC150Q8NCX0 1101 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 ZFP28Q8NHY6 868 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 STYXQ8WUJ0 223 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 SPSB4Q96A44 273 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 GCC1Q96CN9 775 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 FAM89AQ96GI7 184 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 TMEM176AQ96HP8 235 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 PHACTR3Q96KR7 559 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 EIF2AK1Q9BQI3 630 aaKnown RBP4.34□□□□□ -1.71
UBR1-211ENST00000569971 SPATA5L1Q9BVQ7 753 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 TMEM120AQ9BXJ8 343 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 EIF2AQ9BY44 585 aaKnown RBP4.34□□□□□ -1.71
UBR1-211ENST00000569971 MAGEB5Q9BZ81 275 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.34□□□□□ -1.711e-6■■■□□ 14.9
UBR1-211ENST00000569971 MEGF9Q9H1U4 602 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 NELFAQ9H3P2 528 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 PRKRIP1Q9H875 184 aaPredicted RBP4.34□□□□□ -1.71
UBR1-211ENST00000569971 POGKQ9P215 609 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 OAZ3Q9UMX2 235 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 SCAF8Q9UPN6 1271 aaKnown RBP4.34□□□□□ -1.71
UBR1-211ENST00000569971 PAXBP1Q9Y5B6 917 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 CCDC144AA2RUR9 1427 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 CLASP1Q7Z460 1538 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 FAM135AQ9P2D6 1515 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 KDM5CP41229 1560 aa4.34□□□□□ -1.71
UBR1-211ENST00000569971 ZCCHC11Q5TAX3 1644 aaKnown RBP4.34□□□□□ -1.71
UBR1-211ENST00000569971 IQGAP3Q86VI3 1631 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 PLCH2O75038 1416 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 ERBINQ96RT1 1412 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 DRGXA6NNA5 263 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 ACKR2O00590 384 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 TRIM38O00635 465 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 AGR2O95994 175 aa4.33□□□□□ -1.72
UBR1-211ENST00000569971 PYGLP06737 847 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms