RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 ATP11BQ9Y2G3 1177 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 TCRBV7S2A1N4TA0A589 114 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 SLC1A1P43005 524 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 SSR1P43307 286 aaKnown RBP11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 DSC1Q08554 894 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 ZNF268Q14587 947 aaPredicted RBP11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 TXNRD3NBQ6F5E7 133 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 OR6B2Q6IFH4 312 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 ZDHHC14Q8IZN3 488 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 ANKRD52Q8NB46 1076 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 CLEC4CQ8WTT0 213 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 SEPT8Q92599 483 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 SLC4A5Q9BY07 1137 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 TMEM161AQ9NX61 479 aa11.53□□□□□ -0.56
PDXDC1-216ENST00000569715 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.52□□□□□ -0.56
PDXDC1-216ENST00000569715 DCDC2CA8MYV0 355 aa11.52□□□□□ -0.56
PDXDC1-216ENST00000569715 KRIT1O00522 736 aa11.52□□□□□ -0.56
PDXDC1-216ENST00000569715 BEST1O76090 585 aa11.52□□□□□ -0.56
PDXDC1-216ENST00000569715 BCAT1P54687 386 aa11.52□□□□□ -0.56
PDXDC1-216ENST00000569715 RWDD2BP57060 319 aa11.52□□□□□ -0.56
PDXDC1-216ENST00000569715 BST2Q10589 180 aaKnown RBP11.52□□□□□ -0.56
PDXDC1-216ENST00000569715 LONRF2Q1L5Z9 754 aa11.52□□□□□ -0.56
PDXDC1-216ENST00000569715 ATP13A4Q4VNC1 1196 aa11.52□□□□□ -0.56
PDXDC1-216ENST00000569715 SCUBE3Q8IX30 993 aa11.52□□□□□ -0.56
PDXDC1-216ENST00000569715 ARFGAP1Q8N6T3 406 aa11.52□□□□□ -0.56
PDXDC1-216ENST00000569715 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.52□□□□□ -0.56
PDXDC1-216ENST00000569715 ARMC5Q96C12 935 aa11.52□□□□□ -0.56
PDXDC1-216ENST00000569715 SYT15Q9BQS2 421 aa11.52□□□□□ -0.56
PDXDC1-216ENST00000569715 HERPUD2Q9BSE4 406 aa11.52□□□□□ -0.56
PDXDC1-216ENST00000569715 DMGDHQ9UI17 866 aaKnown RBP11.52□□□□□ -0.56
PDXDC1-216ENST00000569715 TTC7AQ9ULT0 858 aaPredicted RBP11.52□□□□□ -0.56
PDXDC1-216ENST00000569715 MYBPHLA2RUH7 354 aa11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 PAPSS1O43252 624 aaPredicted RBP11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 MAN1A1P33908 653 aa11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 RAB6CQ53S08 254 aa11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 OLFML1Q6UWY5 402 aa11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 COLGALT2Q8IYK4 626 aa11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 TMEM86AQ8N2M4 240 aa11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 RSPH1Q8WYR4 309 aa11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 ACSF2Q96CM8 615 aaPredicted RBP11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 RAB6CQ9H0N0 254 aa11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 DDX47Q9H0S4 455 aaKnown RBP11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 TMEM30AQ9NV96 361 aa11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 WDR35Q9P2L0 1181 aa11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 PRG3Q9Y2Y8 225 aaPredicted RBP11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 FNDC1Q4ZHG4 1894 aaPredicted RBP11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 ODC1P11926 461 aa11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 PSMA2P25787 234 aa11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 TAP1Q03518 808 aa11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 CC2D1AQ6P1N0 951 aaPredicted RBP11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 ANKS1BQ7Z6G8 1248 aa11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 URGCPQ8TCY9 931 aa11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 VWCEQ96DN2 955 aa11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 RHOBTB2Q9BYZ6 727 aa11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 MIS12Q9H081 205 aa11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 TBX21Q9UL17 535 aa11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 VWA8A3KMH1 1905 aa11.52□□□□□ -0.57
PDXDC1-216ENST00000569715 ZSCAN5CA6NGD5 496 aaPredicted RBP11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 M0QZQ0 153 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 SETSIPP0DME0 302 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 FLT3P36888 993 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 RNASELQ05823 741 aaKnown RBP11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 SEL1L2Q5TEA6 688 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 C8orf74Q6P047 294 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 TMEM110Q86TL2 294 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 PAWRQ96IZ0 340 aaKnown RBP11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 UROC1Q96N76 676 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 TMEM209Q96SK2 561 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 HNRNPABQ99729 332 aaKnown RBP11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 SEC31AO94979 1220 aaKnown RBP11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 CXCL10P02778 98 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 GJA8P48165 433 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 LHX1P48742 406 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 CACNA2D1P54289 1103 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 LRRC26Q2I0M4 334 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 SH3PXD2AQ5TCZ1 1133 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 DCLRE1AQ6PJP8 1040 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 CRIPAKQ8N1N5 446 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 OR10T2Q8NGX3 314 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 PCED1BQ96HM7 432 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 TOX2Q96NM4 488 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 KRT82Q9NSB4 513 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 RAB21Q9UL25 225 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 PCDHB7Q9Y5E2 793 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 NLRC5Q86WI3 1866 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 PSTPIP1O43586 416 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 LCP1P13796 627 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 OR1G1P47890 313 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 BCAR1P56945 870 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 TUBB4BP68371 445 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 RHOT1Q8IXI2 618 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 GSPT2Q8IYD1 628 aaKnown RBP11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 NIPA2Q8N8Q9 360 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 KHSRPQ92945 711 aaKnown RBP eCLIP11.51□□□□□ -0.575e-7■■■■■ 29.9
PDXDC1-216ENST00000569715 SUSD3Q96L08 255 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 CASD1Q96PB1 797 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 MED10Q9BTT4 135 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 ZNF446Q9NWS9 450 aa11.51□□□□□ -0.57
PDXDC1-216ENST00000569715 PTPRDP23468 1912 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms