RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 SOBPA7XYQ1 873 aa11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 F8VP50 259 aa11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 GOLGA6L22H0YM25 854 aa11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 CLDN5O00501 218 aa11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 TRIM66O15016 1216 aa11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 CILPO75339 1184 aa11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 FGFR1OPO95684 399 aaKnown RBP11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 GRIK1P39086 918 aa11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 CACNA2D1P54289 1103 aa11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 GPC5P78333 572 aa11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 CYP4F8P98187 520 aa11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 WDR44Q5JSH3 913 aa11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 RBM43Q6ZSC3 357 aaKnown RBP11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 FUKQ8N0W3 1084 aa11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 TATDN2Q93075 761 aa11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 TWNKQ96RR1 684 aa11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 TTLL2Q9BWV7 592 aa11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 SLC46A2Q9BY10 475 aa11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 SLITRK6Q9H5Y7 841 aa11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 TASP1Q9H6P5 420 aa11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 UXTQ9UBK9 157 aaPredicted RBP11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 ZMYM5Q9UJ78 669 aa11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 MAGED2Q9UNF1 606 aaPredicted RBP11.78□□□□□ -0.52
SHCBP1-207ENST00000569702 ZNF318Q5VUA4 2279 aa11.77□□□□□ -0.52
SHCBP1-207ENST00000569702 P4HA2O15460 535 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 TADA3O75528 432 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 PDGFBP01127 241 aaPredicted RBP11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 CFHP08603 1231 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 VIPR2P41587 438 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 USP46P62068 366 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 KCNH2Q12809 1159 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 ORC1Q13415 861 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 DPCR1Q3MIW9 517 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 ARHGAP15Q53QZ3 475 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 GPR158Q5T848 1215 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 VITQ6UXI7 678 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 DENND5BQ6ZUT9 1274 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 FAM35AQ86V20 835 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 IRF2BP1Q8IU81 584 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 ARID3BQ8IVW6 561 aaPredicted RBP11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 FBXL6Q8N531 539 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 TTC39CQ8N584 583 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 C12orf29Q8N999 325 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 LMO3Q8TAP4 145 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 E2F7Q96AV8 911 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 RSPRY1Q96DX4 576 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 GCNAQ96QF7 691 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 ARID3AQ99856 593 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 NT5C1AQ9BXI3 368 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 CSNK1G1Q9HCP0 422 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 CISHQ9NSE2 258 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 GREB1Q4ZG55 1949 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 NCANO14594 1321 aa11.77□□□□□ -0.53
SHCBP1-207ENST00000569702 DENND4CQ5VZ89 1909 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 KRBA1A5PL33 1030 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 HEPACAM2A8MVW5 462 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 TNFRSF10BO14763 440 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 CCDC192P0DO97 292 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 CCDC130P13994 396 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 NPR3P17342 541 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 PSMC3P17980 439 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 CD58P19256 250 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 DDX6P26196 483 aaKnown RBP eCLIP11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 ANXA13P27216 316 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 ERCC5P28715 1186 aaPredicted RBP11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 CUL2Q13617 745 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 CT47A1Q5JQC4 288 aaPredicted RBP11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 MON1AQ86VX9 555 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 MFSD6LQ8IWD5 586 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 CMTM8Q8IZV2 173 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 SIX5Q8N196 739 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 SLC2A14Q8TDB8 520 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 DEPDC1BQ8WUY9 529 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 SMARCD1Q96GM5 515 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 LRRC3BQ96PB8 259 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 KCNK16Q96T55 309 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 HNRNPABQ99729 332 aaKnown RBP11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 OBP2AQ9NY56 170 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 IL37Q9NZH6 218 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 EHD2Q9NZN4 543 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 FBXL21Q9UKT6 434 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 ATP8B3O60423 1300 aa11.76□□□□□ -0.53
SHCBP1-207ENST00000569702 OBSL1O75147 1896 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 AP1G2O75843 785 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 PRAMEF12O95522 483 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 MBD3O95983 291 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 AFPP02771 609 aaKnown RBP11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 TRIM21P19474 475 aaKnown RBP11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 COL9A1P20849 921 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 RAD23BP54727 409 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 PFKPQ01813 784 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 FCHO2Q0JRZ9 810 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 IER5LQ5T953 404 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 TXNDC8Q6A555 127 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 NUP93Q8N1F7 819 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 UBR7Q8N806 425 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 MAB21L3Q8N8X9 362 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 SLC4A11Q8NBS3 891 aa11.75□□□□□ -0.53
SHCBP1-207ENST00000569702 ZMIZ2Q8NF64 920 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms