RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 PCDHA5Q9Y5H7 936 aa21.49■■□□□ 1.03
ABCA3-206ENST00000569062 CACNA1HO95180 2353 aa21.49■■□□□ 1.03
ABCA3-206ENST00000569062 PSMC2P35998 433 aaKnown RBP21.48■■□□□ 1.03
ABCA3-206ENST00000569062 SGSM1Q2NKQ1 1148 aa21.48■■□□□ 1.03
ABCA3-206ENST00000569062 ZNF658Q5TYW1 1059 aaPredicted RBP21.48■■□□□ 1.03
ABCA3-206ENST00000569062 SPOPLQ6IQ16 392 aa21.48■■□□□ 1.03
ABCA3-206ENST00000569062 ZNF852Q6ZMS4 543 aa21.48■■□□□ 1.03
ABCA3-206ENST00000569062 INTS8Q75QN2 995 aaKnown RBP21.48■■□□□ 1.03
ABCA3-206ENST00000569062 B3GALNT2Q8NCR0 500 aa21.48■■□□□ 1.03
ABCA3-206ENST00000569062 SPATA20Q8TB22 786 aa21.48■■□□□ 1.03
ABCA3-206ENST00000569062 MRPS31Q92665 395 aaKnown RBP21.48■■□□□ 1.03
ABCA3-206ENST00000569062 TIGD1Q96MW7 591 aa21.48■■□□□ 1.03
ABCA3-206ENST00000569062 GSDMAQ96QA5 445 aa21.48■■□□□ 1.03
ABCA3-206ENST00000569062 OSBPL6Q9BZF3 934 aa21.48■■□□□ 1.03
ABCA3-206ENST00000569062 OBP2AQ9NY56 170 aa21.48■■□□□ 1.03
ABCA3-206ENST00000569062 CCL26Q9Y258 94 aa21.48■■□□□ 1.03
ABCA3-206ENST00000569062 PIAS3Q9Y6X2 628 aa21.48■■□□□ 1.03
ABCA3-206ENST00000569062 CLDN5O00501 218 aa21.47■■□□□ 1.03
ABCA3-206ENST00000569062 HLA-DRAP01903 254 aa21.47■■□□□ 1.03
ABCA3-206ENST00000569062 DDX6P26196 483 aaKnown RBP eCLIP21.47■■□□□ 1.03
ABCA3-206ENST00000569062 PIK3CAP42336 1068 aa21.47■■□□□ 1.03
ABCA3-206ENST00000569062 GCLMP48507 274 aa21.47■■□□□ 1.03
ABCA3-206ENST00000569062 CACNA2D1P54289 1103 aa21.47■■□□□ 1.03
ABCA3-206ENST00000569062 USP46P62068 366 aa21.47■■□□□ 1.03
ABCA3-206ENST00000569062 PPP3CAQ08209 521 aa21.47■■□□□ 1.03
ABCA3-206ENST00000569062 EDRF1Q3B7T1 1238 aa21.47■■□□□ 1.03
ABCA3-206ENST00000569062 BPIFB1Q8TDL5 484 aa21.47■■□□□ 1.03
ABCA3-206ENST00000569062 SMARCE1Q969G3 411 aa21.47■■□□□ 1.03
ABCA3-206ENST00000569062 SPATA17Q96L03 361 aa21.47■■□□□ 1.03
ABCA3-206ENST00000569062 B3GNT5Q9BYG0 378 aa21.47■■□□□ 1.03
ABCA3-206ENST00000569062 ZNF518BQ9C0D4 1074 aa21.47■■□□□ 1.03
ABCA3-206ENST00000569062 MMRN2Q9H8L6 949 aa21.47■■□□□ 1.03
ABCA3-206ENST00000569062 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.47■■□□□ 1.03
ABCA3-206ENST00000569062 TMEM30AQ9NV96 361 aa21.47■■□□□ 1.03
ABCA3-206ENST00000569062 ZMYM5Q9UJ78 669 aa21.47■■□□□ 1.03
ABCA3-206ENST00000569062 VPS13AQ96RL7 3174 aa21.47■■□□□ 1.03
ABCA3-206ENST00000569062 F8VP50 259 aa21.46■■□□□ 1.03
ABCA3-206ENST00000569062 GADD45BO75293 160 aaPredicted RBP21.46■■□□□ 1.03
ABCA3-206ENST00000569062 SMC2O95347 1197 aa21.46■■□□□ 1.03
ABCA3-206ENST00000569062 ASS1P00966 412 aaKnown RBP21.46■■□□□ 1.03
ABCA3-206ENST00000569062 KRT13P13646 458 aa21.46■■□□□ 1.03
ABCA3-206ENST00000569062 AVPR1AP37288 418 aa21.46■■□□□ 1.03
ABCA3-206ENST00000569062 FZD5Q13467 585 aa21.46■■□□□ 1.03
ABCA3-206ENST00000569062 ARHGAP29Q52LW3 1261 aa21.46■■□□□ 1.03
ABCA3-206ENST00000569062 MON1AQ86VX9 555 aa21.46■■□□□ 1.03
ABCA3-206ENST00000569062 CELF5Q8N6W0 485 aaKnown RBP21.46■■□□□ 1.03
ABCA3-206ENST00000569062 TTC8Q8TAM2 541 aa21.46■■□□□ 1.03
ABCA3-206ENST00000569062 CSGALNACT1Q8TDX6 532 aa21.46■■□□□ 1.03
ABCA3-206ENST00000569062 USP13Q92995 863 aaPredicted RBP21.46■■□□□ 1.03
ABCA3-206ENST00000569062 NELL2Q99435 816 aa21.46■■□□□ 1.03
ABCA3-206ENST00000569062 BCO2Q9BYV7 579 aa21.46■■□□□ 1.03
ABCA3-206ENST00000569062 NDRG2Q9UN36 371 aaKnown RBP21.46■■□□□ 1.03
ABCA3-206ENST00000569062 MAN2B1O00754 1011 aa21.45■■□□□ 1.02
ABCA3-206ENST00000569062 TRIM66O15016 1216 aa21.45■■□□□ 1.02
ABCA3-206ENST00000569062 ANXA13P27216 316 aa21.45■■□□□ 1.02
ABCA3-206ENST00000569062 SOX9P48436 509 aa21.45■■□□□ 1.02
ABCA3-206ENST00000569062 COBLL1Q53SF7 1204 aa21.45■■□□□ 1.02
ABCA3-206ENST00000569062 ISM2Q6H9L7 571 aa21.45■■□□□ 1.02
ABCA3-206ENST00000569062 DENND5BQ6ZUT9 1274 aa21.45■■□□□ 1.02
ABCA3-206ENST00000569062 C1orf210Q8IVY1 113 aa21.45■■□□□ 1.02
ABCA3-206ENST00000569062 ZNF687Q8N1G0 1237 aa21.45■■□□□ 1.02
ABCA3-206ENST00000569062 RIN3Q8TB24 985 aa21.45■■□□□ 1.02
ABCA3-206ENST00000569062 TAS1R2Q8TE23 839 aa21.45■■□□□ 1.02
ABCA3-206ENST00000569062 FAM3CQ92520 227 aa21.45■■□□□ 1.02
ABCA3-206ENST00000569062 TAF4BQ92750 862 aa21.45■■□□□ 1.02
ABCA3-206ENST00000569062 SLC22A12Q96S37 553 aa21.45■■□□□ 1.02
ABCA3-206ENST00000569062 CYP2S1Q96SQ9 504 aa21.45■■□□□ 1.02
ABCA3-206ENST00000569062 TRPC7Q9HCX4 862 aa21.45■■□□□ 1.02
ABCA3-206ENST00000569062 GTSE1Q9NYZ3 720 aa21.45■■□□□ 1.02
ABCA3-206ENST00000569062 MRPS17Q9Y2R5 130 aaKnown RBP21.45■■□□□ 1.02
ABCA3-206ENST00000569062 HELZP42694 1942 aaKnown RBP21.45■■□□□ 1.02
ABCA3-206ENST00000569062 CACNA1IQ9P0X4 2223 aa21.44■■□□□ 1.02
ABCA3-206ENST00000569062 SOBPA7XYQ1 873 aa21.44■■□□□ 1.02
ABCA3-206ENST00000569062 P4HA1P13674 534 aa21.44■■□□□ 1.02
ABCA3-206ENST00000569062 CCNE1P24864 410 aa21.44■■□□□ 1.02
ABCA3-206ENST00000569062 NBL1P41271 181 aa21.44■■□□□ 1.02
ABCA3-206ENST00000569062 ASPAP45381 313 aa21.44■■□□□ 1.02
ABCA3-206ENST00000569062 PMS1P54277 932 aaKnown RBP21.44■■□□□ 1.02
ABCA3-206ENST00000569062 ENPEPQ07075 957 aa21.44■■□□□ 1.02
ABCA3-206ENST00000569062 TNK2Q07912 1038 aa21.44■■□□□ 1.02
ABCA3-206ENST00000569062 ORC1Q13415 861 aa21.44■■□□□ 1.02
ABCA3-206ENST00000569062 CLDN23Q96B33 292 aa21.44■■□□□ 1.02
ABCA3-206ENST00000569062 C8orf48Q96LL4 319 aa21.44■■□□□ 1.02
ABCA3-206ENST00000569062 CEP295NLQ96MC4 621 aa21.44■■□□□ 1.02
ABCA3-206ENST00000569062 ELOVL4Q9GZR5 314 aa21.44■■□□□ 1.02
ABCA3-206ENST00000569062 TDP1Q9NUW8 608 aa21.44■■□□□ 1.02
ABCA3-206ENST00000569062 HMGXB4Q9UGU5 601 aa21.44■■□□□ 1.02
ABCA3-206ENST00000569062 HOOK1Q9UJC3 728 aaKnown RBP21.44■■□□□ 1.02
ABCA3-206ENST00000569062 CIZ1Q9ULV3 898 aaPredicted RBP21.44■■□□□ 1.02
ABCA3-206ENST00000569062 MYH10P35580 1976 aa21.44■■□□□ 1.02
ABCA3-206ENST00000569062 C2orf78A6NCI8 922 aa21.43■■□□□ 1.02
ABCA3-206ENST00000569062 CETN3O15182 167 aa21.43■■□□□ 1.02
ABCA3-206ENST00000569062 KPNA1P52294 538 aaPredicted RBP21.43■■□□□ 1.02
ABCA3-206ENST00000569062 MCCD1P59942 119 aaPredicted RBP21.43■■□□□ 1.02
ABCA3-206ENST00000569062 ANKRD40Q6AI12 368 aa21.43■■□□□ 1.02
ABCA3-206ENST00000569062 PAQR9Q6ZVX9 377 aa21.43■■□□□ 1.02
ABCA3-206ENST00000569062 FRMD5Q7Z6J6 570 aa21.43■■□□□ 1.02
ABCA3-206ENST00000569062 ACOT1Q86TX2 421 aa21.43■■□□□ 1.02
ABCA3-206ENST00000569062 MAML2Q8IZL2 1156 aaPredicted RBP21.43■■□□□ 1.02
ABCA3-206ENST00000569062 TNIP3Q96KP6 325 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms