RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 SLITRK1Q96PX8 696 aa11.05□□□□□ -0.64
UBR1-207ENST00000568782 MRPL45Q9BRJ2 306 aaKnown RBP11.05□□□□□ -0.64
UBR1-207ENST00000568782 MKNK1Q9BUB5 465 aa11.05□□□□□ -0.64
UBR1-207ENST00000568782 C8orf33Q9H7E9 229 aaPredicted RBP11.05□□□□□ -0.64
UBR1-207ENST00000568782 TRPC7Q9HCX4 862 aa11.05□□□□□ -0.64
UBR1-207ENST00000568782 TDP1Q9NUW8 608 aa11.05□□□□□ -0.64
UBR1-207ENST00000568782 TRPM5Q9NZQ8 1165 aa11.05□□□□□ -0.64
UBR1-207ENST00000568782 ANAPC1Q9H1A4 1944 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 TRAV19A0A0A6YYK7 116 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 LAMTOR5O43504 91 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 NOL4O94818 638 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 RTN3O95197 1032 aaPredicted RBP11.04□□□□□ -0.64
UBR1-207ENST00000568782 ABL1P00519 1130 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 F11P03951 625 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 USP17L7P0C7H9 530 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 FCARP24071 287 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 GTF2H1P32780 548 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 PRCPP42785 496 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 GCLMP48507 274 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 GPR15P49685 360 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 MLLT6P55198 1093 aaPredicted RBP11.04□□□□□ -0.64
UBR1-207ENST00000568782 DLG4P78352 724 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 LRRC63Q05C16 580 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 TCF15Q12870 199 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 STXBP5Q5T5C0 1151 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 SDHAF4Q5VUM1 108 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 KRT39Q6A163 491 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 SCARA5Q6ZMJ2 495 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 LIMS2Q7Z4I7 341 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 ALYREFQ86V81 257 aaKnown RBP11.04□□□□□ -0.64
UBR1-207ENST00000568782 MON1AQ86VX9 555 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 UNC93AQ86WB7 457 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 GPIHBP1Q8IV16 184 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 C1orf210Q8IVY1 113 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 ELOA2Q8IYF1 753 aaPredicted RBP11.04□□□□□ -0.64
UBR1-207ENST00000568782 STKLD1Q8NE28 680 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 TTC16Q8NEE8 873 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 MYRFLQ96LU7 910 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 FOXQ1Q9C009 403 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 TMEM8AQ9HCN3 771 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 LTB4R2Q9NPC1 389 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 SPATA6Q9NWH7 488 aaPredicted RBP11.04□□□□□ -0.64
UBR1-207ENST00000568782 CHMP5Q9NZZ3 219 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 NDRG2Q9UN36 371 aaKnown RBP11.04□□□□□ -0.64
UBR1-207ENST00000568782 PCDHA5Q9Y5H7 936 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 PIAS3Q9Y6X2 628 aa11.04□□□□□ -0.64
UBR1-207ENST00000568782 WDFY4Q6ZS81 3184 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 BICDL2A1A5D9 508 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 F8VP50 259 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 AKAP3O75969 853 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 HLA-DRAP01903 254 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 HMGA1P17096 107 aaKnown RBP11.03□□□□□ -0.64
UBR1-207ENST00000568782 PFKLP17858 780 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 HDCP19113 662 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 CD72P21854 359 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 MRE11P49959 708 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 CDH8P55286 799 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 FCHO2Q0JRZ9 810 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 CETN1Q12798 172 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 IFRD2Q12894 506 aaPredicted RBP11.03□□□□□ -0.64
UBR1-207ENST00000568782 NR1H3Q13133 447 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 LRRC32Q14392 662 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 COBLL1Q53SF7 1204 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 DCAF17Q5H9S7 520 aaPredicted RBP11.03□□□□□ -0.64
UBR1-207ENST00000568782 TXNDC8Q6A555 127 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 SCARA3Q6AZY7 606 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 SMYD4Q8IYR2 804 aaPredicted RBP11.03□□□□□ -0.64
UBR1-207ENST00000568782 NUP93Q8N1F7 819 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 PDZD8Q8NEN9 1154 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 ENGASEQ8NFI3 743 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 SMARCD1Q96GM5 515 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 DHTKD1Q96HY7 919 aaPredicted RBP11.03□□□□□ -0.64
UBR1-207ENST00000568782 C8orf48Q96LL4 319 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 PKMYT1Q99640 499 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 DDX23Q9BUQ8 820 aaKnown RBP11.03□□□□□ -0.64
UBR1-207ENST00000568782 SLC46A2Q9BY10 475 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 XYLT2Q9H1B5 865 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 SMYD3Q9H7B4 428 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 CYP3A43Q9HB55 503 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 IL21Q9HBE4 155 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 METTL14Q9HCE5 456 aaKnown RBP11.03□□□□□ -0.64
UBR1-207ENST00000568782 CRTAC1Q9NQ79 661 aa11.03□□□□□ -0.64
UBR1-207ENST00000568782 KIF26AQ9ULI4 1882 aaPredicted RBP11.03□□□□□ -0.64
UBR1-207ENST00000568782 SLC16A3O15427 465 aaKnown RBP11.02□□□□□ -0.65
UBR1-207ENST00000568782 HCRTO43612 131 aa11.02□□□□□ -0.65
UBR1-207ENST00000568782 VNN1O95497 513 aa11.02□□□□□ -0.65
UBR1-207ENST00000568782 FGFR1OPO95684 399 aaKnown RBP11.02□□□□□ -0.65
UBR1-207ENST00000568782 ASS1P00966 412 aaKnown RBP11.02□□□□□ -0.65
UBR1-207ENST00000568782 TRIM49P0CI25 452 aa11.02□□□□□ -0.65
UBR1-207ENST00000568782 TRIM49CP0CI26 452 aa11.02□□□□□ -0.65
UBR1-207ENST00000568782 CCNE1P24864 410 aa11.02□□□□□ -0.65
UBR1-207ENST00000568782 YWHAQP27348 245 aa11.02□□□□□ -0.65
UBR1-207ENST00000568782 RPS9P46781 194 aaKnown RBP11.02□□□□□ -0.65
UBR1-207ENST00000568782 MXI1P50539 228 aa11.02□□□□□ -0.65
UBR1-207ENST00000568782 SLC8A3P57103 927 aa11.02□□□□□ -0.65
UBR1-207ENST00000568782 NOP14P78316 857 aaKnown RBP11.02□□□□□ -0.65
UBR1-207ENST00000568782 ZNF268Q14587 947 aaPredicted RBP11.02□□□□□ -0.65
UBR1-207ENST00000568782 ITPRIPL2Q3MIP1 535 aa11.02□□□□□ -0.65
UBR1-207ENST00000568782 CCDC40Q4G0X9 1142 aa11.02□□□□□ -0.65
UBR1-207ENST00000568782 ACOT1Q86TX2 421 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms