RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 SEPT11Q9NVA2 429 aaKnown RBP8.14□□□□□ -1.11
SCAPER-221ENST00000568549 LMCD1Q9NZU5 365 aa8.14□□□□□ -1.11
SCAPER-221ENST00000568549 PCDHGC3Q9UN70 934 aa8.14□□□□□ -1.11
SCAPER-221ENST00000568549 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.14□□□□□ -1.11
SCAPER-221ENST00000568549 CEP83Q9Y592 693 aa8.14□□□□□ -1.11
SCAPER-221ENST00000568549 BZW2Q9Y6E2 419 aaKnown RBP8.14□□□□□ -1.11
SCAPER-221ENST00000568549 PRRG1O14668 218 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 SEC24AO95486 1093 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 VNN2O95498 520 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 C1RP00736 705 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 PTMAP06454 111 aaKnown RBP8.13□□□□□ -1.11
SCAPER-221ENST00000568549 CFHP08603 1231 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 SPATA31D3P0C874 917 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 SETSIPP0DME0 302 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 HAPLN1P10915 354 aaPredicted RBP8.13□□□□□ -1.11
SCAPER-221ENST00000568549 NPR3P17342 541 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 CHRNB2P17787 502 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 TNFAIP3P21580 790 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 IGFBP4P22692 258 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 CYP2F1P24903 491 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 ANXA13P27216 316 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 GRIK1P39086 918 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 MAGEA11P43364 429 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 MAP3K7CLP57077 242 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 SLC8A3P57103 927 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 FMO1Q01740 532 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 BST2Q10589 180 aaKnown RBP8.13□□□□□ -1.11
SCAPER-221ENST00000568549 DUSP4Q13115 394 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 MEA1Q16626 185 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 DUSP6Q16828 381 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 MGAT5BQ3V5L5 792 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 TCEAL5Q5H9L2 206 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 LIN9Q5TKA1 542 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 DENND1BQ6P3S1 775 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 LILRA6Q6PI73 481 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 VSTM1Q6UX27 236 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 TRIM72Q6ZMU5 477 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 CLEC20AQ6ZU45 233 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 SPATA31D4Q6ZUB0 917 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 ZNF571Q7Z3V5 609 aaPredicted RBP8.13□□□□□ -1.11
SCAPER-221ENST00000568549 VPS36Q86VN1 386 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 TTC30AQ86WT1 665 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 PASD1Q8IV76 773 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 SCN4BQ8IWT1 228 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 TTC9BQ8N6N2 239 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 ANKRD52Q8NB46 1076 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 KREMEN2Q8NCW0 462 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 UBA3Q8TBC4 463 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 SLC22A17Q8WUG5 538 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 SECISBP2LQ93073 1101 aaKnown RBP8.13□□□□□ -1.11
SCAPER-221ENST00000568549 CDCA3Q99618 268 aaPredicted RBP8.13□□□□□ -1.11
SCAPER-221ENST00000568549 SEPT5Q99719 369 aaPredicted RBP8.13□□□□□ -1.11
SCAPER-221ENST00000568549 DUSP16Q9BY84 665 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 CRISPLD1Q9H336 500 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 DEF6Q9H4E7 631 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 CYP4F11Q9HBI6 524 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 DMAP1Q9NPF5 467 aaPredicted RBP8.13□□□□□ -1.11
SCAPER-221ENST00000568549 ARHGAP20Q9P2F6 1191 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 HSFX1Q9UBD0 423 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 FBXW11Q9UKB1 542 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 MAFFQ9ULX9 164 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 SLC27A5Q9Y2P5 690 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 MTCH2Q9Y6C9 303 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 C2orf16Q68DN1 1984 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 OBSL1O75147 1896 aa8.13□□□□□ -1.11
SCAPER-221ENST00000568549 DENND4CQ5VZ89 1909 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 SSU72P8A0A1W2PR75 194 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 SPDYE4A6NLX3 237 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 XPO1O14980 1071 aaKnown RBP8.12□□□□□ -1.11
SCAPER-221ENST00000568549 TRIM66O15016 1216 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 SOAT2O75908 522 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 BEST1O76090 585 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 LSM8O95777 96 aaKnown RBP8.12□□□□□ -1.11
SCAPER-221ENST00000568549 C8AP07357 584 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 PLEKP08567 350 aaPredicted RBP8.12□□□□□ -1.11
SCAPER-221ENST00000568549 EPCAMP16422 314 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 POU3F3P20264 500 aaPredicted RBP8.12□□□□□ -1.11
SCAPER-221ENST00000568549 FECHP22830 423 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 EIF4A3P38919 411 aaKnown RBP8.12□□□□□ -1.11
SCAPER-221ENST00000568549 TUFMP49411 452 aaKnown RBP8.12□□□□□ -1.11
SCAPER-221ENST00000568549 GPR15P49685 360 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 CACNA2D1P54289 1103 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 RPL10AP62906 217 aaKnown RBP8.12□□□□□ -1.11
SCAPER-221ENST00000568549 CDK17Q00537 523 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 PDE4CQ08493 712 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 PLD1Q13393 1074 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 ADGRE1Q14246 886 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 PKDCCQ504Y2 493 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 LLGL2Q6P1M3 1020 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 ELMSAN1Q6PJG2 1045 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 CYP26C1Q6V0L0 522 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 CCDC149Q6ZUS6 474 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 Q7L0L9 218 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 TCEAL8Q8IYN2 117 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 MICALL1Q8N3F8 863 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 TMEM35BQ8NCS4 154 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 C1orf131Q8NDD1 294 aaKnown RBP8.12□□□□□ -1.11
SCAPER-221ENST00000568549 SLC7A14Q8TBB6 771 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 C8orf48Q96LL4 319 aa8.12□□□□□ -1.11
SCAPER-221ENST00000568549 PPP1R9BQ96SB3 815 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms