RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 FXR2P51116 673 aaKnown RBP eCLIP17.44■□□□□ 0.38
CLK3-223ENST00000568488 EOGTQ5NDL2 527 aa17.44■□□□□ 0.38
CLK3-223ENST00000568488 EMC10Q5UCC4 262 aa17.44■□□□□ 0.38
CLK3-223ENST00000568488 SFTPA1Q8IWL2 248 aa17.44■□□□□ 0.38
CLK3-223ENST00000568488 IL17RCQ8NAC3 791 aa17.44■□□□□ 0.38
CLK3-223ENST00000568488 ADAM32Q8TC27 787 aa17.44■□□□□ 0.38
CLK3-223ENST00000568488 TSPAN18Q96SJ8 248 aa17.44■□□□□ 0.38
CLK3-223ENST00000568488 CAPN10Q9HC96 672 aa17.44■□□□□ 0.38
CLK3-223ENST00000568488 ZDHHC4Q9NPG8 344 aa17.44■□□□□ 0.38
CLK3-223ENST00000568488 TCRBV21S2A2A0A5A6 115 aa17.43■□□□□ 0.38
CLK3-223ENST00000568488 OGTO15294 1046 aa17.43■□□□□ 0.38
CLK3-223ENST00000568488 JAK2O60674 1132 aa17.43■□□□□ 0.38
CLK3-223ENST00000568488 SYPP08247 313 aa17.43■□□□□ 0.38
CLK3-223ENST00000568488 NFICP08651 508 aa17.43■□□□□ 0.38
CLK3-223ENST00000568488 HDCP19113 662 aa17.43■□□□□ 0.38
CLK3-223ENST00000568488 SLC6A11P48066 632 aa17.43■□□□□ 0.38
CLK3-223ENST00000568488 TAF6P49848 677 aa17.43■□□□□ 0.38
CLK3-223ENST00000568488 RPL10AP62906 217 aaKnown RBP17.43■□□□□ 0.38
CLK3-223ENST00000568488 TSPY1Q01534 308 aa17.43■□□□□ 0.38
CLK3-223ENST00000568488 NBR1Q14596 966 aa17.43■□□□□ 0.38
CLK3-223ENST00000568488 KCNB1Q14721 858 aa17.43■□□□□ 0.38
CLK3-223ENST00000568488 TMEM132DQ14C87 1099 aa17.43■□□□□ 0.38
CLK3-223ENST00000568488 ZRSR1Q15695 479 aaKnown RBP17.43■□□□□ 0.38
CLK3-223ENST00000568488 TTC38Q5R3I4 469 aa17.43■□□□□ 0.38
CLK3-223ENST00000568488 PEAR1Q5VY43 1037 aaPredicted RBP17.43■□□□□ 0.38
CLK3-223ENST00000568488 KRT79Q5XKE5 535 aa17.43■□□□□ 0.38
CLK3-223ENST00000568488 CENPQQ7L2Z9 268 aaPredicted RBP17.43■□□□□ 0.38
CLK3-223ENST00000568488 NSUN7Q8NE18 718 aaKnown RBP17.43■□□□□ 0.38
CLK3-223ENST00000568488 LRRC15Q8TF66 581 aa17.43■□□□□ 0.38
CLK3-223ENST00000568488 ASH1LQ9NR48 2969 aaKnown RBP17.43■□□□□ 0.38
CLK3-223ENST00000568488 STK24Q9Y6E0 443 aa17.43■□□□□ 0.38
CLK3-223ENST00000568488 BPTFQ12830 3046 aa17.42■□□□□ 0.38
CLK3-223ENST00000568488 ANK1P16157 1881 aa17.42■□□□□ 0.38
CLK3-223ENST00000568488 ANO9A1A5B4 782 aa17.42■□□□□ 0.38
CLK3-223ENST00000568488 C2orf78A6NCI8 922 aa17.42■□□□□ 0.38
CLK3-223ENST00000568488 PP2D1A8MPX8 630 aa17.42■□□□□ 0.38
CLK3-223ENST00000568488 NOL4O94818 638 aa17.42■□□□□ 0.38
CLK3-223ENST00000568488 CYP2F1P24903 491 aa17.42■□□□□ 0.38
CLK3-223ENST00000568488 ZNF33AQ06730 810 aa17.42■□□□□ 0.38
CLK3-223ENST00000568488 C19orf57Q0VDD7 668 aa17.42■□□□□ 0.38
CLK3-223ENST00000568488 ORC2Q13416 577 aaPredicted RBP17.42■□□□□ 0.38
CLK3-223ENST00000568488 PDIA5Q14554 519 aa17.42■□□□□ 0.38
CLK3-223ENST00000568488 NFE2Q16621 373 aaPredicted RBP17.42■□□□□ 0.38
CLK3-223ENST00000568488 RABEPKQ7Z6M1 372 aa17.42■□□□□ 0.38
CLK3-223ENST00000568488 CD302Q8IX05 232 aa17.42■□□□□ 0.38
CLK3-223ENST00000568488 FSIP1Q8NA03 581 aa17.42■□□□□ 0.38
CLK3-223ENST00000568488 PNKPQ96T60 521 aa17.42■□□□□ 0.38
CLK3-223ENST00000568488 MSTO1Q9BUK6 570 aa17.42■□□□□ 0.38
CLK3-223ENST00000568488 TIPINQ9BVW5 301 aa17.42■□□□□ 0.38
CLK3-223ENST00000568488 DNAAF2Q9NVR5 837 aaKnown RBP17.42■□□□□ 0.38
CLK3-223ENST00000568488 APOBEC2Q9Y235 224 aaKnown RBP17.42■□□□□ 0.38
CLK3-223ENST00000568488 PTPRDP23468 1912 aa17.42■□□□□ 0.38
CLK3-223ENST00000568488 TNRC6BQ9UPQ9 1833 aaKnown RBP17.42■□□□□ 0.38
CLK3-223ENST00000568488 TULP1O00294 542 aaPredicted RBP17.41■□□□□ 0.38
CLK3-223ENST00000568488 HNRNPDLO14979 420 aaKnown RBP17.41■□□□□ 0.38
CLK3-223ENST00000568488 EPB41L2O43491 1005 aaKnown RBP17.41■□□□□ 0.38
CLK3-223ENST00000568488 APODP05090 189 aa17.41■□□□□ 0.38
CLK3-223ENST00000568488 ADRB2P07550 413 aa17.41■□□□□ 0.38
CLK3-223ENST00000568488 GUCY2CP25092 1073 aa17.41■□□□□ 0.38
CLK3-223ENST00000568488 CDC25AP30304 524 aa17.41■□□□□ 0.38
CLK3-223ENST00000568488 ANKRD1Q15327 319 aa17.41■□□□□ 0.38
CLK3-223ENST00000568488 GAB4Q2WGN9 574 aa17.41■□□□□ 0.38
CLK3-223ENST00000568488 SLC36A4Q6YBV0 504 aa17.41■□□□□ 0.38
CLK3-223ENST00000568488 KCNK18Q7Z418 384 aa17.41■□□□□ 0.38
CLK3-223ENST00000568488 NAXDQ8IW45 347 aa17.41■□□□□ 0.38
CLK3-223ENST00000568488 SPATA18Q8TC71 538 aa17.41■□□□□ 0.38
CLK3-223ENST00000568488 TRMT2BQ96GJ1 504 aaKnown RBP17.41■□□□□ 0.38
CLK3-223ENST00000568488 PNMA5Q96PV4 448 aa17.41■□□□□ 0.38
CLK3-223ENST00000568488 RAB34Q9BZG1 259 aa17.41■□□□□ 0.38
CLK3-223ENST00000568488 SCUBE2Q9NQ36 999 aa17.41■□□□□ 0.38
CLK3-223ENST00000568488 GCNT4Q9P109 453 aa17.41■□□□□ 0.38
CLK3-223ENST00000568488 CELSR3Q9NYQ7 3312 aa17.41■□□□□ 0.38
CLK3-223ENST00000568488 OBSL1O75147 1896 aa17.41■□□□□ 0.38
CLK3-223ENST00000568488 HELZ2Q9BYK8 2649 aaKnown RBP17.41■□□□□ 0.38
CLK3-223ENST00000568488 TSC2P49815 1807 aa17.4■□□□□ 0.38
CLK3-223ENST00000568488 KAT7O95251 611 aa17.4■□□□□ 0.38
CLK3-223ENST00000568488 PRB1P04280 392 aa17.4■□□□□ 0.38
CLK3-223ENST00000568488 CYP17A1P05093 508 aa17.4■□□□□ 0.38
CLK3-223ENST00000568488 SLC14A1Q13336 389 aa17.4■□□□□ 0.38
CLK3-223ENST00000568488 ME3Q16798 604 aa17.4■□□□□ 0.38
CLK3-223ENST00000568488 HSF5Q4G112 596 aaPredicted RBP17.4■□□□□ 0.38
CLK3-223ENST00000568488 SLCO6A1Q86UG4 719 aa17.4■□□□□ 0.38
CLK3-223ENST00000568488 SCN4BQ8IWT1 228 aa17.4■□□□□ 0.38
CLK3-223ENST00000568488 RGL4Q8IZJ4 473 aa17.4■□□□□ 0.38
CLK3-223ENST00000568488 C4orf32Q8N8J7 132 aa17.4■□□□□ 0.38
CLK3-223ENST00000568488 GTF3C6Q969F1 213 aa17.4■□□□□ 0.38
CLK3-223ENST00000568488 MYRFLQ96LU7 910 aa17.4■□□□□ 0.38
CLK3-223ENST00000568488 DPP3Q9NY33 737 aa17.4■□□□□ 0.38
CLK3-223ENST00000568488 ARHGAP26Q9UNA1 814 aa17.4■□□□□ 0.38
CLK3-223ENST00000568488 KPNA7A9QM74 516 aa17.39■□□□□ 0.37
CLK3-223ENST00000568488 H0YCG3 227 aa17.39■□□□□ 0.37
CLK3-223ENST00000568488 LEFTY2O00292 366 aa17.39■□□□□ 0.37
CLK3-223ENST00000568488 SCAMP3O14828 347 aaKnown RBP17.39■□□□□ 0.37
CLK3-223ENST00000568488 FAM189A1O60320 539 aa17.39■□□□□ 0.37
CLK3-223ENST00000568488 ADAM23O75077 832 aa17.39■□□□□ 0.37
CLK3-223ENST00000568488 ATP2C1P98194 919 aaPredicted RBP17.39■□□□□ 0.37
CLK3-223ENST00000568488 KDSRQ06136 332 aa17.39■□□□□ 0.37
CLK3-223ENST00000568488 MESP2Q0VG99 397 aa17.39■□□□□ 0.37
CLK3-223ENST00000568488 DHCR24Q15392 516 aa17.39■□□□□ 0.37
CLK3-223ENST00000568488 PLEKHG6Q3KR16 790 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms