RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 N4BP2L2Q92802 583 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-250ENST00000568290 ATP2A3Q93084 1043 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 TSPAN18Q96SJ8 248 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 TBCBQ99426 244 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 HEMGNQ9BXL5 484 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 KLC2Q9H0B6 622 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 VCXQ9H320 206 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 ASB7Q9H672 318 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 ACSS3Q9H6R3 686 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 ETNK1Q9HBU6 452 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 PRMT7Q9NVM4 692 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-250ENST00000568290 CYP39A1Q9NYL5 469 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 PIM2Q9P1W9 311 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 STOML1Q9UBI4 398 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 LNPEPQ9UIQ6 1025 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 ZNF112Q9UJU3 913 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 ADAMTS5Q9UNA0 930 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 C15orf41Q9Y2V0 281 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 PCDHAC2Q9Y5I4 1007 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-250ENST00000568290 UMODL1Q5DID0 1318 aa8.01□□□□□ -1.13
ATXN3-250ENST00000568290 A8MXQ7 604 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 POC1B-GALNT4F8VUJ3 575 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 IGF2BP3O00425 579 aaKnown RBP eCLIP8□□□□□ -1.13
ATXN3-250ENST00000568290 KLF11O14901 512 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 CHADO15335 359 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 EDF1O60869 148 aaKnown RBP8□□□□□ -1.13
ATXN3-250ENST00000568290 ATP9AO75110 1047 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 VDRP11473 427 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 TAC1P20366 129 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 TGM2P21980 687 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 MARK3P27448 753 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 POLD1P28340 1107 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 CHRNA5P30532 468 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 NCALDP61601 193 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 ROR1Q01973 937 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 ZBTB16Q05516 673 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 PDIA2Q13087 525 aaKnown RBP8□□□□□ -1.13
ATXN3-250ENST00000568290 SPP2Q13103 211 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 NAB1Q13506 487 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 CCDC14Q49A88 953 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 NOL9Q5SY16 702 aaKnown RBP8□□□□□ -1.13
ATXN3-250ENST00000568290 RNASEH2BQ5TBB1 312 aaKnown RBP8□□□□□ -1.13
ATXN3-250ENST00000568290 PRPF38BQ5VTL8 546 aaKnown RBP8□□□□□ -1.13
ATXN3-250ENST00000568290 PPP2R2DQ66LE6 453 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 AADACL2Q6P093 401 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 SLC39A4Q6P5W5 647 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 MPZL3Q6UWV2 235 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 CATSPERGQ6ZRH7 1159 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 ASRGL1Q7L266 308 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 PLPPR4Q7Z2D5 763 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 SLC51AQ86UW1 340 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 CHSY1Q86X52 802 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 HACE1Q8IYU2 909 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 GPATCH11Q8N954 259 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 PROCA1Q8NCQ7 364 aaPredicted RBP8□□□□□ -1.13
ATXN3-250ENST00000568290 GDAP1Q8TB36 358 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 GTF3C2Q8WUA4 911 aaPredicted RBP8□□□□□ -1.13
ATXN3-250ENST00000568290 ATG4AQ8WYN0 398 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 USP6NLQ92738 828 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 STMN2Q93045 179 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 MCUR1Q96AQ8 359 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 TBC1D31Q96DN5 1066 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 BTBD6Q96KE9 485 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 MCEEQ96PE7 176 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 POP1Q99575 1024 aaKnown RBP8□□□□□ -1.13
ATXN3-250ENST00000568290 DDX23Q9BUQ8 820 aaKnown RBP8□□□□□ -1.13
ATXN3-250ENST00000568290 PPP1R12CQ9BZL4 782 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 VCX3BQ9H321 246 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 STN1Q9H668 368 aaKnown RBP8□□□□□ -1.13
ATXN3-250ENST00000568290 DCLRE1BQ9H816 532 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 RPF1Q9H9Y2 349 aaKnown RBP8□□□□□ -1.13
ATXN3-250ENST00000568290 XPNPEP1Q9NQW7 623 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 AAASQ9NRG9 546 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 MRGBPQ9NV56 204 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 TBK1Q9UHD2 729 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 ZFP69BQ9UJL9 534 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 ZNF180Q9UJW8 692 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 POLIQ9UNA4 740 aa8□□□□□ -1.13
ATXN3-250ENST00000568290 EPB41L3Q9Y2J2 1087 aaPredicted RBP8□□□□□ -1.13
ATXN3-250ENST00000568290 DYNC1LI1Q9Y6G9 523 aaKnown RBP8□□□□□ -1.13
ATXN3-250ENST00000568290 IGKV6D-21A0A0A0MT36 114 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 TCRBV7S2A1N4TA0A589 114 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 TISP43B9A030 160 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 E7ESA3 106 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 AP3B1O00203 1094 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 NOP56O00567 594 aaKnown RBP7.99□□□□□ -1.13
ATXN3-250ENST00000568290 ACKR2O00590 384 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 PRPSAP2O60256 369 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 ZNF862O60290 1169 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 CIB2O75838 187 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 FAM155BO75949 473 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 ANP32DO95626 131 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 STAU1O95793 577 aaKnown RBP7.99□□□□□ -1.13
ATXN3-250ENST00000568290 IFNB1P01574 187 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 PRKCBP05771 671 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 CYP2C8P10632 490 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 SKIP12755 728 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 CD19P15391 556 aa7.99□□□□□ -1.13
ATXN3-250ENST00000568290 PECAM1P16284 738 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms