RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 FUBP3Q96I24 572 aaKnown RBP eCLIP13.78□□□□□ -0.2
TSC2-220ENST00000568238 ZFYVE19Q96K21 471 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 SYT15Q9BQS2 421 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 GTPBP4Q9BZE4 634 aaKnown RBP13.78□□□□□ -0.2
TSC2-220ENST00000568238 SMG9Q9H0W8 520 aaKnown RBP13.78□□□□□ -0.2
TSC2-220ENST00000568238 KCTD10Q9H3F6 313 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 C8orf33Q9H7E9 229 aaPredicted RBP13.78□□□□□ -0.2
TSC2-220ENST00000568238 TMEM63CQ9P1W3 806 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 UXTQ9UBK9 157 aaPredicted RBP13.78□□□□□ -0.2
TSC2-220ENST00000568238 PCDHGA2Q9Y5H1 932 aa13.78□□□□□ -0.2
TSC2-220ENST00000568238 MYBPHLA2RUH7 354 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 NOL4O94818 638 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 F11P03951 625 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
TSC2-220ENST00000568238 CTHP32929 405 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 SOX9P48436 509 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 PSMC1P62191 440 aaKnown RBP13.77□□□□□ -0.21
TSC2-220ENST00000568238 STIM1Q13586 685 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 LRRC32Q14392 662 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 DDR2Q16832 855 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 KLHL10Q6JEL2 608 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 LIMS2Q7Z4I7 341 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 MAB21L3Q8N8X9 362 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 ATRIPQ8WXE1 791 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 MRPS31Q92665 395 aaKnown RBP13.77□□□□□ -0.21
TSC2-220ENST00000568238 MYLPFQ96A32 169 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 TRMT2BQ96GJ1 504 aaKnown RBP13.77□□□□□ -0.21
TSC2-220ENST00000568238 MMS19Q96T76 1030 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 HINFPQ9BQA5 517 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 CEP250Q9BV73 2442 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 SLC46A2Q9BY10 475 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 KIF9Q9HAQ2 790 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 LMAN1LQ9HAT1 526 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 THG1LQ9NWX6 298 aaKnown RBP13.77□□□□□ -0.21
TSC2-220ENST00000568238 ZSCAN32Q9NX65 697 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 GTSE1Q9NYZ3 720 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 CDH9Q9ULB4 789 aa13.77□□□□□ -0.21
TSC2-220ENST00000568238 SOBPA7XYQ1 873 aa13.76□□□□□ -0.21
TSC2-220ENST00000568238 SPECC1L-ADORA2AF8WAN1 911 aa13.76□□□□□ -0.21
TSC2-220ENST00000568238 PSMA7O14818 248 aa13.76□□□□□ -0.21
TSC2-220ENST00000568238 EXOC3O60645 756 aa13.76□□□□□ -0.21
TSC2-220ENST00000568238 TADA3O75528 432 aa13.76□□□□□ -0.21
TSC2-220ENST00000568238 CHRNB1P11230 501 aa13.76□□□□□ -0.21
TSC2-220ENST00000568238 WARSP23381 471 aaKnown RBP13.76□□□□□ -0.21
TSC2-220ENST00000568238 MAGEA11P43364 429 aa13.76□□□□□ -0.21
TSC2-220ENST00000568238 TNNC1P63316 161 aa13.76□□□□□ -0.21
TSC2-220ENST00000568238 PPP2R5DQ14738 602 aa13.76□□□□□ -0.21
TSC2-220ENST00000568238 NFKBIBQ15653 356 aa13.76□□□□□ -0.21
TSC2-220ENST00000568238 MAPRE1Q15691 268 aaKnown RBP13.76□□□□□ -0.21
TSC2-220ENST00000568238 KLHL40Q2TBA0 621 aa13.76□□□□□ -0.21
TSC2-220ENST00000568238 TXNDC8Q6A555 127 aa13.76□□□□□ -0.21
TSC2-220ENST00000568238 FAM171BQ6P995 826 aa13.76□□□□□ -0.21
TSC2-220ENST00000568238 TSSK4Q6SA08 328 aa13.76□□□□□ -0.21
TSC2-220ENST00000568238 RALGPS2Q86X27 583 aaPredicted RBP13.76□□□□□ -0.21
TSC2-220ENST00000568238 SCN4BQ8IWT1 228 aa13.76□□□□□ -0.21
TSC2-220ENST00000568238 TRIML1Q8N9V2 468 aa13.76□□□□□ -0.21
TSC2-220ENST00000568238 TTC8Q8TAM2 541 aa13.76□□□□□ -0.21
TSC2-220ENST00000568238 CTNND2Q9UQB3 1225 aa13.76□□□□□ -0.21
TSC2-220ENST00000568238 CCL26Q9Y258 94 aa13.76□□□□□ -0.21
TSC2-220ENST00000568238 CACNA1AO00555 2505 aa13.76□□□□□ -0.21
TSC2-220ENST00000568238 PPP1R3GB7ZBB8 358 aa13.75□□□□□ -0.21
TSC2-220ENST00000568238 PDXKO00764 312 aa13.75□□□□□ -0.21
TSC2-220ENST00000568238 CALUO43852 315 aaPredicted RBP13.75□□□□□ -0.21
TSC2-220ENST00000568238 ATP2C2O75185 946 aa13.75□□□□□ -0.21
TSC2-220ENST00000568238 NR3C1P04150 777 aa13.75□□□□□ -0.21
TSC2-220ENST00000568238 LMO2P25791 158 aa13.75□□□□□ -0.21
TSC2-220ENST00000568238 CCR3P51677 355 aa13.75□□□□□ -0.21
TSC2-220ENST00000568238 TNK2Q07912 1038 aa13.75□□□□□ -0.21
TSC2-220ENST00000568238 TRPC3Q13507 836 aa13.75□□□□□ -0.21
TSC2-220ENST00000568238 ITPRIPL2Q3MIP1 535 aa13.75□□□□□ -0.21
TSC2-220ENST00000568238 COBLL1Q53SF7 1204 aa13.75□□□□□ -0.21
TSC2-220ENST00000568238 TXNDC11Q6PKC3 985 aa13.75□□□□□ -0.21
TSC2-220ENST00000568238 MON1AQ86VX9 555 aa13.75□□□□□ -0.21
TSC2-220ENST00000568238 ZBTB44Q8NCP5 570 aa13.75□□□□□ -0.21
TSC2-220ENST00000568238 NELL1Q92832 810 aa13.75□□□□□ -0.21
TSC2-220ENST00000568238 USP13Q92995 863 aaPredicted RBP13.75□□□□□ -0.21
TSC2-220ENST00000568238 SYAP1Q96A49 352 aaPredicted RBP13.75□□□□□ -0.21
TSC2-220ENST00000568238 MYRFLQ96LU7 910 aa13.75□□□□□ -0.21
TSC2-220ENST00000568238 FAM126AQ9BYI3 521 aaPredicted RBP13.75□□□□□ -0.21
TSC2-220ENST00000568238 GZF1Q9H116 711 aaPredicted RBP13.75□□□□□ -0.21
TSC2-220ENST00000568238 SNX25Q9H3E2 840 aa13.75□□□□□ -0.21
TSC2-220ENST00000568238 TRPC7Q9HCX4 862 aa13.75□□□□□ -0.21
TSC2-220ENST00000568238 CRTAC1Q9NQ79 661 aa13.75□□□□□ -0.21
TSC2-220ENST00000568238 TDP1Q9NUW8 608 aa13.75□□□□□ -0.21
TSC2-220ENST00000568238 MAGEC2Q9UBF1 373 aaPredicted RBP13.75□□□□□ -0.21
TSC2-220ENST00000568238 TRIM49BA6NDI0 452 aa13.74□□□□□ -0.21
TSC2-220ENST00000568238 PHACTR2O75167 634 aa13.74□□□□□ -0.21
TSC2-220ENST00000568238 TACC1O75410 805 aa13.74□□□□□ -0.21
TSC2-220ENST00000568238 STAU1O95793 577 aaKnown RBP13.74□□□□□ -0.21
TSC2-220ENST00000568238 CST3P01034 146 aaPredicted RBP13.74□□□□□ -0.21
TSC2-220ENST00000568238 PDGFRBP09619 1106 aa13.74□□□□□ -0.21
TSC2-220ENST00000568238 TDGF1P13385 188 aa13.74□□□□□ -0.21
TSC2-220ENST00000568238 CASP4P49662 377 aa13.74□□□□□ -0.21
TSC2-220ENST00000568238 PMS1P54277 932 aaKnown RBP13.74□□□□□ -0.21
TSC2-220ENST00000568238 CYP27A1Q02318 531 aa13.74□□□□□ -0.21
TSC2-220ENST00000568238 ZNF268Q14587 947 aaPredicted RBP13.74□□□□□ -0.21
TSC2-220ENST00000568238 DPCR1Q3MIW9 517 aa13.74□□□□□ -0.21
TSC2-220ENST00000568238 WDR72Q3MJ13 1102 aa13.74□□□□□ -0.21
TSC2-220ENST00000568238 ZCWPW2Q504Y3 356 aa13.74□□□□□ -0.21
TSC2-220ENST00000568238 MDH1BQ5I0G3 518 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms