RNA–Protein interactions for RNA: ENST00000568230.5

KNOP1-205, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KNOP1, Length 1,311 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-205ENST00000568230 PPP1R3GB7ZBB8 358 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 STX10O60499 249 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 DDX6P26196 483 aaKnown RBP eCLIP18.23■□□□□ 0.51
KNOP1-205ENST00000568230 PLA2G5P39877 138 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 MXI1P50539 228 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 STARD6P59095 220 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 PRKCQQ04759 706 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 FCHO2Q0JRZ9 810 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 MLF2Q15773 248 aaPredicted RBP18.23■□□□□ 0.51
KNOP1-205ENST00000568230 ISM2Q6H9L7 571 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 MFSD6LQ8IWD5 586 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 SHDQ96IW2 340 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 TNIP3Q96KP6 325 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 TRMT61BQ9BVS5 477 aaKnown RBP18.23■□□□□ 0.51
KNOP1-205ENST00000568230 ZNF518BQ9C0D4 1074 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 NIF3L1Q9GZT8 377 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 MMRN2Q9H8L6 949 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 APOBEC3GQ9HC16 384 aaKnown RBP18.23■□□□□ 0.51
KNOP1-205ENST00000568230 TRPV5Q9NQA5 729 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 OBP2AQ9NY56 170 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 MAGED2Q9UNF1 606 aaPredicted RBP18.23■□□□□ 0.51
KNOP1-205ENST00000568230 TRIM66O15016 1216 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 PRAMEF12O95522 483 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 GRIK1P39086 918 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 INCA1Q0VD86 236 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 SLC44A4Q53GD3 710 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 TTI2Q6NXR4 508 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 UNC93AQ86WB7 457 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 IRF7Q92985 503 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 C8orf48Q96LL4 319 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 SLC46A2Q9BY10 475 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 B3GNT5Q9BYG0 378 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 BRD9Q9H8M2 597 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 TMEM30AQ9NV96 361 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 HMGXB4Q9UGU5 601 aa18.23■□□□□ 0.51
KNOP1-205ENST00000568230 TICRRQ7Z2Z1 1910 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 ANAPC1Q9H1A4 1944 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 USP34Q70CQ2 3546 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 ZNF638Q14966 1978 aaKnown RBP18.22■□□□□ 0.51
KNOP1-205ENST00000568230 F8VP50 259 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 ARNTLO00327 626 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 BIN1O00499 593 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 GALR2O43603 387 aaPredicted RBP18.22■□□□□ 0.51
KNOP1-205ENST00000568230 PI15O43692 258 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 ANXA13P27216 316 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 GDI1P31150 447 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 CACNA2D1P54289 1103 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 TCF15Q12870 199 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 CLEC17AQ6ZS10 378 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 DENND5BQ6ZUT9 1274 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 MON1AQ86VX9 555 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 CMTM8Q8IZV2 173 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 TRIML1Q8N9V2 468 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 CCDC150Q8NCX0 1101 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 FBXL13Q8NEE6 735 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 MRPS31Q92665 395 aaKnown RBP18.22■□□□□ 0.51
KNOP1-205ENST00000568230 CEP63Q96MT8 703 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 LRRC3BQ96PB8 259 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 TTLL2Q9BWV7 592 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 CYP3A43Q9HB55 503 aa18.22■□□□□ 0.51
KNOP1-205ENST00000568230 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.22■□□□□ 0.511e-6■■■■■ 54.3
KNOP1-205ENST00000568230 ARMCX3Q9UH62 379 aaPredicted RBP18.22■□□□□ 0.51
KNOP1-205ENST00000568230 ATP8B3O60423 1300 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 MIA3Q5JRA6 1907 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 CLDN5O00501 218 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 RFX1P22670 979 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 NDST1P52848 882 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 PTPN5P54829 565 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 USP46P62068 366 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 CBWD6Q4V339 395 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 DCAF17Q5H9S7 520 aaPredicted RBP18.21■□□□□ 0.51
KNOP1-205ENST00000568230 CBWD3Q5JTY5 395 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 CBWD5Q5RIA9 395 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 KLHL10Q6JEL2 608 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 ACOT1Q86TX2 421 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 FAM35AQ86V20 835 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 FUKQ8N0W3 1084 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 CRYBG2Q8N1P7 616 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 PJA1Q8NG27 643 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 NELFBQ8WX92 580 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 SEMA4DQ92854 862 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 SLC35C1Q96A29 364 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 FAXDC2Q96IV6 333 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 DUSP9Q99956 384 aaKnown RBP18.21■□□□□ 0.51
KNOP1-205ENST00000568230 KIAA1468Q9P260 1216 aa18.21■□□□□ 0.51
KNOP1-205ENST00000568230 WDR87Q6ZQQ6 2873 aa18.2■□□□□ 0.5
KNOP1-205ENST00000568230 KANSL1LA0AUZ9 987 aa18.2■□□□□ 0.5
KNOP1-205ENST00000568230 BICDL2A1A5D9 508 aa18.2■□□□□ 0.5
KNOP1-205ENST00000568230 ZNF263O14978 683 aa18.2■□□□□ 0.5
KNOP1-205ENST00000568230 CHADO15335 359 aa18.2■□□□□ 0.5
KNOP1-205ENST00000568230 LRRN2O75325 713 aa18.2■□□□□ 0.5
KNOP1-205ENST00000568230 TCERG1LQ5VWI1 586 aa18.2■□□□□ 0.5
KNOP1-205ENST00000568230 TXNDC8Q6A555 127 aa18.2■□□□□ 0.5
KNOP1-205ENST00000568230 PAQR9Q6ZVX9 377 aa18.2■□□□□ 0.5
KNOP1-205ENST00000568230 FRMD5Q7Z6J6 570 aa18.2■□□□□ 0.5
KNOP1-205ENST00000568230 CCDC105Q8IYK2 499 aa18.2■□□□□ 0.5
KNOP1-205ENST00000568230 MAB21L3Q8N8X9 362 aa18.2■□□□□ 0.5
KNOP1-205ENST00000568230 FAM122AQ96E09 287 aa18.2■□□□□ 0.5
KNOP1-205ENST00000568230 SMARCD1Q96GM5 515 aa18.2■□□□□ 0.5
KNOP1-205ENST00000568230 FOXQ1Q9C009 403 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms