RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 WDR72Q3MJ13 1102 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 MORN1Q5T089 497 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 ECHDC2Q86YB7 292 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 IFNL1Q8IU54 200 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 GLIS1Q8NBF1 620 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 PPTC7Q8NI37 304 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 RMDN2Q96LZ7 410 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 LHX5Q9H2C1 402 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 CISHQ9NSE2 258 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 ERAP1Q9NZ08 941 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 PSMC3IPQ9P2W1 217 aaPredicted RBP17.6■□□□□ 0.41
CMTM3-213ENST00000566756 USH1CQ9Y6N9 552 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 OGTO15294 1046 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 MSCO60682 206 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 CST3P01034 146 aaPredicted RBP17.6■□□□□ 0.41
CMTM3-213ENST00000566756 KRT7P08729 469 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 HOXC6P09630 235 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 TCF4P15884 667 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 CCND1P24385 295 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 PHBP35232 272 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 OGDHQ02218 1023 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 MGAT5Q09328 741 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 ZFYVE27Q5T4F4 411 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 CDCA2Q69YH5 1023 aaPredicted RBP17.6■□□□□ 0.41
CMTM3-213ENST00000566756 C17orf99Q6UX52 265 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 ERICH1Q86X53 443 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 TRIM50Q86XT4 487 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 NPLOC4Q8TAT6 608 aa17.6■□□□□ 0.41
CMTM3-213ENST00000566756 RAB3IPQ96QF0 476 aaPredicted RBP17.6■□□□□ 0.41
CMTM3-213ENST00000566756 EVPLQ92817 2033 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 C3orf70A6NLC5 250 aaPredicted RBP17.59■□□□□ 0.41
CMTM3-213ENST00000566756 TYROBPO43914 113 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 DCTN3O75935 186 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 SF3A3Q12874 501 aaKnown RBP eCLIP17.59■□□□□ 0.41
CMTM3-213ENST00000566756 MXD4Q14582 209 aaPredicted RBP17.59■□□□□ 0.41
CMTM3-213ENST00000566756 SETDB1Q15047 1291 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 PARP6Q2NL67 630 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 DUSP28Q4G0W2 176 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 IQSEC1Q6DN90 963 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 TLDC1Q6P9B6 456 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 PRUNE1Q86TP1 453 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 PPIL6Q8IXY8 311 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 THNSL1Q8IYQ7 743 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 WDTC1Q8N5D0 677 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 ZNF398Q8TD17 642 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 KLHL11Q9NVR0 708 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 WDR35Q9P2L0 1181 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.59■□□□□ 0.41
CMTM3-213ENST00000566756 LRRD1A4D1F6 860 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 SIGLEC16A6NMB1 481 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 FAM155AB1AL88 458 aaPredicted RBP17.59■□□□□ 0.41
CMTM3-213ENST00000566756 E7ESA3 106 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 EDF1O60869 148 aaKnown RBP17.59■□□□□ 0.41
CMTM3-213ENST00000566756 ZWINTO95229 277 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 ZSCAN5DPP0CG00 497 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 KRT15P19012 456 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 MARK3P27448 753 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 ALDH3A1P30838 453 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 ELF1P32519 619 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 ADCYAP1R1P41586 468 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 MAP2K5Q13163 448 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 HIF1AQ16665 826 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 BBS12Q6ZW61 710 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 CXorf56Q9H5V9 222 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 VPS37BQ9H9H4 285 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 CPSF3Q9UKF6 684 aaKnown RBP17.59■□□□□ 0.41
CMTM3-213ENST00000566756 ZMYND8Q9ULU4 1186 aaPredicted RBP17.59■□□□□ 0.41
CMTM3-213ENST00000566756 PHTF1Q9UMS5 762 aa17.59■□□□□ 0.41
CMTM3-213ENST00000566756 SGK1O00141 431 aa17.58■□□□□ 0.4
CMTM3-213ENST00000566756 MED7O43513 233 aa17.58■□□□□ 0.4
CMTM3-213ENST00000566756 LGALS2P05162 132 aa17.58■□□□□ 0.4
CMTM3-213ENST00000566756 HOXD8P13378 290 aaPredicted RBP17.58■□□□□ 0.4
CMTM3-213ENST00000566756 BRD2P25440 801 aaKnown RBP17.58■□□□□ 0.4
CMTM3-213ENST00000566756 SSTR3P32745 418 aaPredicted RBP17.58■□□□□ 0.4
CMTM3-213ENST00000566756 MSH2P43246 934 aa17.58■□□□□ 0.4
CMTM3-213ENST00000566756 GEMIN4P57678 1058 aaKnown RBP17.58■□□□□ 0.4
CMTM3-213ENST00000566756 MYL6P60660 151 aa17.58■□□□□ 0.4
CMTM3-213ENST00000566756 SLC25A11Q02978 314 aaKnown RBP17.58■□□□□ 0.4
CMTM3-213ENST00000566756 SREBF2Q12772 1141 aa17.58■□□□□ 0.4
CMTM3-213ENST00000566756 CBLBQ13191 982 aa17.58■□□□□ 0.4
CMTM3-213ENST00000566756 PKN2Q16513 984 aaKnown RBP17.58■□□□□ 0.4
CMTM3-213ENST00000566756 HADHQ16836 314 aaKnown RBP17.58■□□□□ 0.4
CMTM3-213ENST00000566756 ZNF484Q5JVG2 852 aa17.58■□□□□ 0.4
CMTM3-213ENST00000566756 ZBED8Q8IZ13 594 aa17.58■□□□□ 0.4
CMTM3-213ENST00000566756 ATP11CQ8NB49 1132 aa17.58■□□□□ 0.4
CMTM3-213ENST00000566756 PRPF31Q8WWY3 499 aaKnown RBP17.58■□□□□ 0.4
CMTM3-213ENST00000566756 INPP5DQ92835 1189 aa17.58■□□□□ 0.4
CMTM3-213ENST00000566756 ALKBH8Q96BT7 664 aaKnown RBP17.58■□□□□ 0.4
CMTM3-213ENST00000566756 HHIPL1Q96JK4 782 aa17.58■□□□□ 0.4
CMTM3-213ENST00000566756 ACO2Q99798 780 aaKnown RBP17.58■□□□□ 0.4
CMTM3-213ENST00000566756 DHRS4Q9BTZ2 278 aa17.58■□□□□ 0.4
CMTM3-213ENST00000566756 GGT7Q9UJ14 662 aa17.58■□□□□ 0.4
CMTM3-213ENST00000566756 POC1B-GALNT4F8VUJ3 575 aa17.57■□□□□ 0.4
CMTM3-213ENST00000566756 KRT16P08779 473 aa17.57■□□□□ 0.4
CMTM3-213ENST00000566756 WEE2P0C1S8 567 aa17.57■□□□□ 0.4
CMTM3-213ENST00000566756 ARL4CP56559 192 aa17.57■□□□□ 0.4
CMTM3-213ENST00000566756 LACTBP83111 547 aaPredicted RBP17.57■□□□□ 0.4
CMTM3-213ENST00000566756 PDIA2Q13087 525 aaKnown RBP17.57■□□□□ 0.4
CMTM3-213ENST00000566756 TRPC3Q13507 836 aa17.57■□□□□ 0.4
CMTM3-213ENST00000566756 FASTKD3Q14CZ7 662 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms