RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 CSGALNACT1Q8TDX6 532 aa20.24■□□□□ 0.83
CPNE7-208ENST00000566398 NELL2Q99435 816 aa20.24■□□□□ 0.83
CPNE7-208ENST00000566398 PHOX2BQ99453 314 aa20.24■□□□□ 0.83
CPNE7-208ENST00000566398 TSG101Q99816 390 aa20.24■□□□□ 0.83
CPNE7-208ENST00000566398 BCO2Q9BYV7 579 aa20.24■□□□□ 0.83
CPNE7-208ENST00000566398 IMPG2Q9BZV3 1241 aa20.24■□□□□ 0.83
CPNE7-208ENST00000566398 SMG9Q9H0W8 520 aaKnown RBP20.24■□□□□ 0.83
CPNE7-208ENST00000566398 PCDHA5Q9Y5H7 936 aa20.24■□□□□ 0.83
CPNE7-208ENST00000566398 PIAS3Q9Y6X2 628 aa20.24■□□□□ 0.83
CPNE7-208ENST00000566398 SOBPA7XYQ1 873 aa20.23■□□□□ 0.83
CPNE7-208ENST00000566398 ARNTLO00327 626 aa20.23■□□□□ 0.83
CPNE7-208ENST00000566398 MAN2B1O00754 1011 aa20.23■□□□□ 0.83
CPNE7-208ENST00000566398 LRRN2O75325 713 aa20.23■□□□□ 0.83
CPNE7-208ENST00000566398 TADA3O75528 432 aa20.23■□□□□ 0.83
CPNE7-208ENST00000566398 ASS1P00966 412 aaKnown RBP20.23■□□□□ 0.83
CPNE7-208ENST00000566398 HLA-DRAP01903 254 aa20.23■□□□□ 0.83
CPNE7-208ENST00000566398 PRCPP42785 496 aa20.23■□□□□ 0.83
CPNE7-208ENST00000566398 GCLMP48507 274 aa20.23■□□□□ 0.83
CPNE7-208ENST00000566398 MRE11P49959 708 aa20.23■□□□□ 0.83
CPNE7-208ENST00000566398 ARHGAP29Q52LW3 1261 aa20.23■□□□□ 0.83
CPNE7-208ENST00000566398 COBLL1Q53SF7 1204 aa20.23■□□□□ 0.83
CPNE7-208ENST00000566398 TXNDC8Q6A555 127 aa20.23■□□□□ 0.83
CPNE7-208ENST00000566398 ALYREFQ86V81 257 aaKnown RBP20.23■□□□□ 0.83
CPNE7-208ENST00000566398 MON1AQ86VX9 555 aa20.23■□□□□ 0.83
CPNE7-208ENST00000566398 CELF5Q8N6W0 485 aaKnown RBP20.23■□□□□ 0.83
CPNE7-208ENST00000566398 BPIFB1Q8TDL5 484 aa20.23■□□□□ 0.83
CPNE7-208ENST00000566398 ERCC4Q92889 916 aaPredicted RBP20.23■□□□□ 0.83
CPNE7-208ENST00000566398 ELMO3Q96BJ8 720 aa20.23■□□□□ 0.83
CPNE7-208ENST00000566398 TNIP3Q96KP6 325 aa20.23■□□□□ 0.83
CPNE7-208ENST00000566398 LRRC3BQ96PB8 259 aa20.23■□□□□ 0.83
CPNE7-208ENST00000566398 SDCBP2Q9H190 292 aa20.23■□□□□ 0.83
CPNE7-208ENST00000566398 EHD2Q9NZN4 543 aa20.23■□□□□ 0.83
CPNE7-208ENST00000566398 MTF2Q9Y483 593 aaPredicted RBP20.23■□□□□ 0.83
CPNE7-208ENST00000566398 F8VP50 259 aa20.22■□□□□ 0.83
CPNE7-208ENST00000566398 CETN3O15182 167 aa20.22■□□□□ 0.83
CPNE7-208ENST00000566398 NCAM2O15394 837 aa20.22■□□□□ 0.83
CPNE7-208ENST00000566398 EPB41P11171 864 aaKnown RBP20.22■□□□□ 0.83
CPNE7-208ENST00000566398 GLULP15104 373 aa20.22■□□□□ 0.83
CPNE7-208ENST00000566398 TARSP26639 723 aaKnown RBP20.22■□□□□ 0.83
CPNE7-208ENST00000566398 MAGEA9P43362 315 aa20.22■□□□□ 0.83
CPNE7-208ENST00000566398 PLCB2Q00722 1185 aa20.22■□□□□ 0.83
CPNE7-208ENST00000566398 PPP3CAQ08209 521 aa20.22■□□□□ 0.83
CPNE7-208ENST00000566398 DENND5BQ6ZUT9 1274 aa20.22■□□□□ 0.83
CPNE7-208ENST00000566398 EEF2KMTQ96G04 330 aa20.22■□□□□ 0.83
CPNE7-208ENST00000566398 MSANTD3Q96H12 275 aa20.22■□□□□ 0.83
CPNE7-208ENST00000566398 C8orf48Q96LL4 319 aa20.22■□□□□ 0.83
CPNE7-208ENST00000566398 ZNF518BQ9C0D4 1074 aa20.22■□□□□ 0.83
CPNE7-208ENST00000566398 MMRN2Q9H8L6 949 aa20.22■□□□□ 0.83
CPNE7-208ENST00000566398 KIF9Q9HAQ2 790 aa20.22■□□□□ 0.83
CPNE7-208ENST00000566398 TRPC7Q9HCX4 862 aa20.22■□□□□ 0.83
CPNE7-208ENST00000566398 THG1LQ9NWX6 298 aaKnown RBP20.22■□□□□ 0.83
CPNE7-208ENST00000566398 ATP8B3O60423 1300 aa20.22■□□□□ 0.83
CPNE7-208ENST00000566398 GTF2H1P32780 548 aa20.21■□□□□ 0.83
CPNE7-208ENST00000566398 ASPAP45381 313 aa20.21■□□□□ 0.83
CPNE7-208ENST00000566398 SPOPLQ6IQ16 392 aa20.21■□□□□ 0.83
CPNE7-208ENST00000566398 ELOA2Q8IYF1 753 aaPredicted RBP20.21■□□□□ 0.83
CPNE7-208ENST00000566398 CCDC150Q8NCX0 1101 aa20.21■□□□□ 0.83
CPNE7-208ENST00000566398 TAS1R2Q8TE23 839 aa20.21■□□□□ 0.83
CPNE7-208ENST00000566398 FAM3CQ92520 227 aa20.21■□□□□ 0.83
CPNE7-208ENST00000566398 ZFYVE19Q96K21 471 aa20.21■□□□□ 0.83
CPNE7-208ENST00000566398 B3GNT5Q9BYG0 378 aa20.21■□□□□ 0.83
CPNE7-208ENST00000566398 TMEM8AQ9HCN3 771 aa20.21■□□□□ 0.83
CPNE7-208ENST00000566398 NDRG2Q9UN36 371 aaKnown RBP20.21■□□□□ 0.83
CPNE7-208ENST00000566398 COL4A3Q01955 1670 aa20.2■□□□□ 0.82
CPNE7-208ENST00000566398 TRAV19A0A0A6YYK7 116 aa20.2■□□□□ 0.82
CPNE7-208ENST00000566398 CLDN5O00501 218 aa20.2■□□□□ 0.82
CPNE7-208ENST00000566398 KPNA1P52294 538 aaPredicted RBP20.2■□□□□ 0.82
CPNE7-208ENST00000566398 MLLT6P55198 1093 aaPredicted RBP20.2■□□□□ 0.82
CPNE7-208ENST00000566398 NOP14P78316 857 aaKnown RBP20.2■□□□□ 0.82
CPNE7-208ENST00000566398 STIM1Q13586 685 aa20.2■□□□□ 0.82
CPNE7-208ENST00000566398 C1orf228Q6PIY5 440 aa20.2■□□□□ 0.82
CPNE7-208ENST00000566398 C1orf210Q8IVY1 113 aa20.2■□□□□ 0.82
CPNE7-208ENST00000566398 ADSSL1Q8N142 457 aa20.2■□□□□ 0.82
CPNE7-208ENST00000566398 USP13Q92995 863 aaPredicted RBP20.2■□□□□ 0.82
CPNE7-208ENST00000566398 MED10Q9BTT4 135 aa20.2■□□□□ 0.82
CPNE7-208ENST00000566398 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.2■□□□□ 0.821e-6■■■■■ 67.6
CPNE7-208ENST00000566398 TDP1Q9NUW8 608 aa20.2■□□□□ 0.82
CPNE7-208ENST00000566398 CCL26Q9Y258 94 aa20.2■□□□□ 0.82
CPNE7-208ENST00000566398 SHISA7A6NL88 538 aa20.19■□□□□ 0.82
CPNE7-208ENST00000566398 SLC16A3O15427 465 aaKnown RBP20.19■□□□□ 0.82
CPNE7-208ENST00000566398 STX10O60499 249 aa20.19■□□□□ 0.82
CPNE7-208ENST00000566398 CKMP06732 381 aa20.19■□□□□ 0.82
CPNE7-208ENST00000566398 TRIM21P19474 475 aaKnown RBP20.19■□□□□ 0.82
CPNE7-208ENST00000566398 MXI1P50539 228 aa20.19■□□□□ 0.82
CPNE7-208ENST00000566398 CACNA2D1P54289 1103 aa20.19■□□□□ 0.82
CPNE7-208ENST00000566398 USP46P62068 366 aa20.19■□□□□ 0.82
CPNE7-208ENST00000566398 FKBP3Q00688 224 aaKnown RBP20.19■□□□□ 0.82
CPNE7-208ENST00000566398 LRRC63Q05C16 580 aa20.19■□□□□ 0.82
CPNE7-208ENST00000566398 ZNF268Q14587 947 aaPredicted RBP20.19■□□□□ 0.82
CPNE7-208ENST00000566398 KRT39Q6A163 491 aa20.19■□□□□ 0.82
CPNE7-208ENST00000566398 FAM35AQ86V20 835 aa20.19■□□□□ 0.82
CPNE7-208ENST00000566398 CLDN23Q96B33 292 aa20.19■□□□□ 0.82
CPNE7-208ENST00000566398 TTLL2Q9BWV7 592 aa20.19■□□□□ 0.82
CPNE7-208ENST00000566398 NIF3L1Q9GZT8 377 aa20.19■□□□□ 0.82
CPNE7-208ENST00000566398 C8orf33Q9H7E9 229 aaPredicted RBP20.19■□□□□ 0.82
CPNE7-208ENST00000566398 SPATA6Q9NWH7 488 aaPredicted RBP20.19■□□□□ 0.82
CPNE7-208ENST00000566398 PSMA7O14818 248 aa20.18■□□□□ 0.82
CPNE7-208ENST00000566398 GADD45BO75293 160 aaPredicted RBP20.18■□□□□ 0.82
CPNE7-208ENST00000566398 USP17L7P0C7H9 530 aa20.18■□□□□ 0.82
CPNE7-208ENST00000566398 CCNE1P24864 410 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms