RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 PCYOX1Q9UHG3 505 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 DSEQ9UL01 958 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 MTUS1Q9ULD2 1270 aa9.35□□□□□ -0.91
LSM3P5-201ENST00000566307 MEIS3P2A8K0S8 358 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 TMEM110-MUSTN1A8MSY1 372 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 M0QZQ0 153 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 MAP2K7O14733 419 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 PHF2O75151 1096 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 KRT7P08729 469 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 PYGMP11217 842 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 FGFR1P11362 822 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 TYMPP19971 482 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 GBP1P32455 592 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 PLA2G4AP47712 749 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 MARCKSL1P49006 195 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 DNA2P51530 1060 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 ZNF143P52747 638 aaPredicted RBP9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 DRG2P55039 364 aaKnown RBP9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 PSMC1P62191 440 aaKnown RBP9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 RPL7AP62424 266 aaKnown RBP9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 PLCB3Q01970 1234 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 DSC1Q08554 894 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 ZNF252P-AS1Q0IIN9 211 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 CUL1Q13616 776 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 MBTPS1Q14703 1052 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 SIX1Q15475 284 aaPredicted RBP9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 GOLGA7BQ2TAP0 167 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 EMBQ6PCB8 327 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 DCLRE1AQ6PJP8 1040 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 LRRC8DQ7L1W4 858 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 ACOT1Q86TX2 421 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 TTC30AQ86WT1 665 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 RCOR2Q8IZ40 523 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 TMEM130Q8N3G9 435 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 AENQ8WTP8 325 aaKnown RBP9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 KCTD13Q8WZ19 329 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 BTBD6Q96KE9 485 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 PKNOX2Q96KN3 472 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 SENP8Q96LD8 212 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 TOX2Q96NM4 488 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 MCEEQ96PE7 176 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 BEGAINQ9BUH8 593 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 TRIM7Q9C029 511 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 UNC93B1Q9H1C4 597 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 TRPV6Q9H1D0 765 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 EPC1Q9H2F5 836 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 LRRC19Q9H756 370 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 GOLGA2P5Q9HBQ8 144 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 ASNSD1Q9NWL6 643 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 ZNF446Q9NWS9 450 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 TMEM161AQ9NX61 479 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 WBP1LQ9NX94 342 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 MIOSQ9NXC5 875 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 SMARCAL1Q9NZC9 954 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 CHORDC1Q9UHD1 332 aaPredicted RBP9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 DMGDHQ9UI17 866 aaKnown RBP9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 CDH9Q9ULB4 789 aa9.34□□□□□ -0.91
LSM3P5-201ENST00000566307 TDRD15B5MCY1 1934 aaKnown RBP9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 C2CD4BA6NLJ0 364 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 ZNF487B1APH4 448 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 CYB561D2O14569 222 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 XPO1O14980 1071 aaKnown RBP9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 RAD51CO43502 376 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 CXCL10P02778 98 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 PCSK1P29120 753 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 RFC1P35251 1148 aaPredicted RBP9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 PTPN9P43378 593 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 SCNN1GP51170 649 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 EPHB4P54760 987 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 RBM10P98175 930 aaKnown RBP9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 SLC6A3Q01959 620 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 OGDHQ02218 1023 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 KLF1Q13351 362 aaPredicted RBP9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 TAZQ16635 292 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 HADHQ16836 314 aaKnown RBP9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 PLEKHG4Q58EX7 1191 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 DRICH1Q6PGQ1 229 aaPredicted RBP9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 OLFML1Q6UWY5 402 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 CD300LGQ6UXG3 332 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 SYDE1Q6ZW31 735 aaPredicted RBP9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 SLC26A9Q7LBE3 791 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 HDXQ7Z353 690 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 ANKRD33Q7Z3H0 272 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 RTN4RL1Q86UN2 441 aaPredicted RBP9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 OSTM1Q86WC4 334 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 SCML4Q8N228 414 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 PRELID2Q8N945 189 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 B3GALNT2Q8NCR0 500 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 CAVIN3Q969G5 261 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 KRT12Q99456 494 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 CNPY3Q9BT09 278 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 DUSP16Q9BY84 665 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 FUT8Q9BYC5 575 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 FRMD8P1Q9BZ68 369 aaPredicted RBP9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 OSBPL7Q9BZF2 842 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 SYNCQ9H7C4 482 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 TSC2P49815 1807 aa9.33□□□□□ -0.92
LSM3P5-201ENST00000566307 TANC1Q9C0D5 1861 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 E5RJQ4 531 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 HOXA2O43364 376 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms