RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 DHX34Q14147 1143 aaKnown RBP17.75■□□□□ 0.43
RAB40C-210ENST00000566290 SEL1L2Q5TEA6 688 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 SCARA3Q6AZY7 606 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 FAM117BQ6P1L5 589 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 MAATS1Q7Z4T9 603 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 FAM228AQ86W67 206 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 HACE1Q8IYU2 909 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 C12orf50Q8NA57 414 aaPredicted RBP17.75■□□□□ 0.43
RAB40C-210ENST00000566290 PHOSPHO2Q8TCD6 241 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 TFAP2BQ92481 460 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 SEPT8Q92599 483 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 CAVIN3Q969G5 261 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 ELMO3Q96BJ8 720 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 C11orf70Q9BRQ4 267 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 EIF2AQ9BY44 585 aaKnown RBP17.75■□□□□ 0.43
RAB40C-210ENST00000566290 UBXN6Q9BZV1 441 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 KCNH6Q9H252 994 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 SNTG2Q9NY99 539 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 EHD2Q9NZN4 543 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 NXF1Q9UBU9 619 aaKnown RBP17.75■□□□□ 0.43
RAB40C-210ENST00000566290 IP6K2Q9UHH9 426 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 POLIQ9UNA4 740 aa17.75■□□□□ 0.43
RAB40C-210ENST00000566290 MICAL3Q7RTP6 2002 aa17.74■□□□□ 0.43
RAB40C-210ENST00000566290 TMEM191CA6NGB0 347 aa17.74■□□□□ 0.43
RAB40C-210ENST00000566290 O00370 1275 aa17.74■□□□□ 0.43
RAB40C-210ENST00000566290 KRIT1O00522 736 aa17.74■□□□□ 0.43
RAB40C-210ENST00000566290 PIRO00625 290 aa17.74■□□□□ 0.43
RAB40C-210ENST00000566290 ATMINO43313 823 aaPredicted RBP17.74■□□□□ 0.43
RAB40C-210ENST00000566290 BRD2P25440 801 aaKnown RBP17.74■□□□□ 0.43
RAB40C-210ENST00000566290 CD52P31358 61 aa17.74■□□□□ 0.43
RAB40C-210ENST00000566290 RAB27AP51159 221 aa17.74■□□□□ 0.43
RAB40C-210ENST00000566290 CUL1Q13616 776 aa17.74■□□□□ 0.43
RAB40C-210ENST00000566290 LCLAT1Q6UWP7 414 aa17.74■□□□□ 0.43
RAB40C-210ENST00000566290 MMS22LQ6ZRQ5 1243 aa17.74■□□□□ 0.43
RAB40C-210ENST00000566290 DPH6Q7L8W6 267 aa17.74■□□□□ 0.43
RAB40C-210ENST00000566290 KRT222Q8N1A0 295 aa17.74■□□□□ 0.43
RAB40C-210ENST00000566290 CCDC26Q8TAB7 109 aa17.74■□□□□ 0.43
RAB40C-210ENST00000566290 FEZF2Q8TBJ5 459 aa17.74■□□□□ 0.43
RAB40C-210ENST00000566290 FAM129AQ9BZQ8 928 aa17.74■□□□□ 0.43
RAB40C-210ENST00000566290 ELOVL4Q9GZR5 314 aa17.74■□□□□ 0.43
RAB40C-210ENST00000566290 NXF3Q9H4D5 531 aaKnown RBP17.74■□□□□ 0.43
RAB40C-210ENST00000566290 SMYD3Q9H7B4 428 aa17.74■□□□□ 0.43
RAB40C-210ENST00000566290 UBE2ZQ9H832 354 aaPredicted RBP17.74■□□□□ 0.43
RAB40C-210ENST00000566290 DMGDHQ9UI17 866 aaKnown RBP17.74■□□□□ 0.43
RAB40C-210ENST00000566290 CACNA1AO00555 2505 aa17.74■□□□□ 0.43
RAB40C-210ENST00000566290 FAM187AA6NFU0 413 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 FGGP02679 453 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 CFHP08603 1231 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 FGFR4P22455 802 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 CHRNA3P32297 505 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 PAK2Q13177 524 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 ZNF268Q14587 947 aaPredicted RBP17.73■□□□□ 0.43
RAB40C-210ENST00000566290 ACAP1Q15027 740 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 LEXMQ3ZCV2 418 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 C9orf57Q5W0N0 161 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 SCARA5Q6ZMJ2 495 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 RHOT1Q8IXI2 618 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 KATNAL2Q8IYT4 538 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 WDTC1Q8N5D0 677 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 STK32AQ8WU08 396 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 LINC01599Q8WXQ3 324 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 SLCO2A1Q92959 643 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 ZMAT2Q96NC0 199 aaKnown RBP17.73■□□□□ 0.43
RAB40C-210ENST00000566290 NT5C1AQ9BXI3 368 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 ACBD3Q9H3P7 528 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 CYLDQ9NQC7 956 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 SMARCAL1Q9NZC9 954 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 IPPQ9Y573 584 aa17.73■□□□□ 0.43
RAB40C-210ENST00000566290 SMIM28A0A1B0GU29 152 aa17.72■□□□□ 0.43
RAB40C-210ENST00000566290 FSCN2O14926 492 aa17.72■□□□□ 0.43
RAB40C-210ENST00000566290 SART1O43290 800 aaKnown RBP17.72■□□□□ 0.43
RAB40C-210ENST00000566290 ZNF623O75123 536 aa17.72■□□□□ 0.43
RAB40C-210ENST00000566290 GJB5O95377 273 aa17.72■□□□□ 0.43
RAB40C-210ENST00000566290 GBP1P32455 592 aa17.72■□□□□ 0.43
RAB40C-210ENST00000566290 PTPN7P35236 360 aa17.72■□□□□ 0.43
RAB40C-210ENST00000566290 FNTAP49354 379 aa17.72■□□□□ 0.43
RAB40C-210ENST00000566290 PIGHQ14442 188 aaPredicted RBP17.72■□□□□ 0.43
RAB40C-210ENST00000566290 SGO2Q562F6 1265 aa17.72■□□□□ 0.43
RAB40C-210ENST00000566290 ARHGAP17Q68EM7 881 aa17.72■□□□□ 0.43
RAB40C-210ENST00000566290 DNAJC24Q6P3W2 148 aa17.72■□□□□ 0.43
RAB40C-210ENST00000566290 POLNQ7Z5Q5 900 aa17.72■□□□□ 0.43
RAB40C-210ENST00000566290 RTN4RL1Q86UN2 441 aaPredicted RBP17.72■□□□□ 0.43
RAB40C-210ENST00000566290 ERICH1Q86X53 443 aa17.72■□□□□ 0.43
RAB40C-210ENST00000566290 MREGQ8N565 214 aa17.72■□□□□ 0.43
RAB40C-210ENST00000566290 SMG8Q8ND04 991 aaKnown RBP17.72■□□□□ 0.43
RAB40C-210ENST00000566290 C1orf131Q8NDD1 294 aaKnown RBP17.72■□□□□ 0.43
RAB40C-210ENST00000566290 SPATA18Q8TC71 538 aa17.72■□□□□ 0.43
RAB40C-210ENST00000566290 GDPD5Q8WTR4 605 aa17.72■□□□□ 0.43
RAB40C-210ENST00000566290 KRT35Q92764 455 aa17.72■□□□□ 0.43
RAB40C-210ENST00000566290 SLC38A7Q9NVC3 462 aa17.72■□□□□ 0.43
RAB40C-210ENST00000566290 PCYOX1Q9UHG3 505 aa17.72■□□□□ 0.43
RAB40C-210ENST00000566290 MTUS1Q9ULD2 1270 aa17.72■□□□□ 0.43
RAB40C-210ENST00000566290 GINS2Q9Y248 185 aa17.72■□□□□ 0.43
RAB40C-210ENST00000566290 COL4A4P53420 1690 aaPredicted RBP17.71■□□□□ 0.43
RAB40C-210ENST00000566290 SIGLEC16A6NMB1 481 aa17.71■□□□□ 0.43
RAB40C-210ENST00000566290 GPR182O15218 404 aa17.71■□□□□ 0.43
RAB40C-210ENST00000566290 PHF2O75151 1096 aa17.71■□□□□ 0.43
RAB40C-210ENST00000566290 HEXIM1O94992 359 aaKnown RBP17.71■□□□□ 0.43
RAB40C-210ENST00000566290 KCNA5P22460 613 aa17.71■□□□□ 0.43
RAB40C-210ENST00000566290 SCNN1AP37088 669 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms