RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 PASD1Q8IV76 773 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 SCN4BQ8IWT1 228 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 ATAD1Q8NBU5 361 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 UBA3Q8TBC4 463 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 SLC20A1Q8WUM9 679 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 DDX1Q92499 740 aaKnown RBP8.24□□□□□ -1.09
CDH1-208ENST00000565810 HSFY1Q96LI6 401 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 CDCA3Q99618 268 aaPredicted RBP8.24□□□□□ -1.09
CDH1-208ENST00000565810 PKMYT1Q99640 499 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 CHP1Q99653 195 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 SEPT5Q99719 369 aaPredicted RBP8.24□□□□□ -1.09
CDH1-208ENST00000565810 LPIN3Q9BQK8 851 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 NSUN3Q9H649 340 aaKnown RBP8.24□□□□□ -1.09
CDH1-208ENST00000565810 SYNCQ9H7C4 482 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 DMAP1Q9NPF5 467 aaPredicted RBP8.24□□□□□ -1.09
CDH1-208ENST00000565810 ST7Q9NRC1 585 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 KRT82Q9NSB4 513 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 TMLHEQ9NVH6 421 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 HSFX1Q9UBD0 423 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 ADAMTS1Q9UHI8 967 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 SLC27A5Q9Y2P5 690 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 CEP290O15078 2479 aa8.24□□□□□ -1.09
CDH1-208ENST00000565810 ANK1P16157 1881 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 EPOPA6NHQ4 379 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 XPO1O14980 1071 aaKnown RBP8.23□□□□□ -1.09
CDH1-208ENST00000565810 PER2O15055 1255 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 ARHGAP6O43182 974 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 CLASP2O75122 1294 aaKnown RBP8.23□□□□□ -1.09
CDH1-208ENST00000565810 PLEKP08567 350 aaPredicted RBP8.23□□□□□ -1.09
CDH1-208ENST00000565810 SRGAP2BP0DMP2 458 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 HAPLN1P10915 354 aaPredicted RBP8.23□□□□□ -1.09
CDH1-208ENST00000565810 GZMAP12544 262 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 CHRNB2P17787 502 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 IGFBP4P22692 258 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 FECHP22830 423 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 CYP2F1P24903 491 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 SSTR3P32745 418 aaPredicted RBP8.23□□□□□ -1.09
CDH1-208ENST00000565810 GPD2P43304 727 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 ACADSBP45954 432 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 NSFP46459 744 aaKnown RBP8.23□□□□□ -1.09
CDH1-208ENST00000565810 KIF11P52732 1056 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 PDE4CQ08493 712 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 VEPH1Q14D04 833 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 TAF12Q16514 161 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 SLC18A3Q16572 532 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 CCDC142Q17RM4 750 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 CLEC16AQ2KHT3 1053 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 CCDC122Q5T0U0 273 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 C10orf76Q5T2E6 689 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 NAA35Q5VZE5 725 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 ACAD10Q6JQN1 1059 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 DENND1BQ6P3S1 775 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 CLEC20AQ6ZU45 233 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 PAQR9Q6ZVX9 377 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 RBM23Q86U06 439 aaKnown RBP8.23□□□□□ -1.09
CDH1-208ENST00000565810 TTC30AQ86WT1 665 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 ERICH1Q86X53 443 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 TCEAL8Q8IYN2 117 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 ELMOD1Q8N336 334 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 TXLNBQ8N3L3 684 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 KREMEN2Q8NCW0 462 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 C1orf131Q8NDD1 294 aaKnown RBP8.23□□□□□ -1.09
CDH1-208ENST00000565810 IPO4Q8TEX9 1081 aaKnown RBP8.23□□□□□ -1.09
CDH1-208ENST00000565810 STK32AQ8WU08 396 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 HDAC7Q8WUI4 952 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 SECISBP2LQ93073 1101 aaKnown RBP8.23□□□□□ -1.09
CDH1-208ENST00000565810 TRIM44Q96DX7 344 aaPredicted RBP8.23□□□□□ -1.09
CDH1-208ENST00000565810 PPP1R13BQ96KQ4 1090 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 C8orf48Q96LL4 319 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 CEP295NLQ96MC4 621 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 GAS2L1Q99501 681 aaPredicted RBP8.23□□□□□ -1.09
CDH1-208ENST00000565810 ZSWIM1Q9BR11 485 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 UBXN6Q9BZV1 441 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 PLEKHA4Q9H4M7 779 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 PRDM12Q9H4Q4 367 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 LRRC4Q9HBW1 653 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 EHD2Q9NZN4 543 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 PCDHGC5Q9Y5F6 944 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 EPN1Q9Y6I3 576 aaPredicted RBP8.23□□□□□ -1.09
CDH1-208ENST00000565810 TDRD15B5MCY1 1934 aaKnown RBP8.23□□□□□ -1.09
CDH1-208ENST00000565810 PDE4DIPQ5VU43 2346 aa8.23□□□□□ -1.09
CDH1-208ENST00000565810 SCN1AP35498 2009 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 SOWAHDA6NJG2 315 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 TMCO5BA8MYB1 307 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 EIF3CLB5ME19 914 aaKnown RBP8.22□□□□□ -1.09
CDH1-208ENST00000565810 F8VP50 259 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 DDX3XO00571 662 aaKnown RBP eCLIP8.22□□□□□ -1.09
CDH1-208ENST00000565810 NCK2O43639 380 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 RTN2O75298 545 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 LRG1P02750 347 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 CYP1A1P04798 512 aaPredicted RBP8.22□□□□□ -1.09
CDH1-208ENST00000565810 CALB1P05937 261 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 C8AP07357 584 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 CFHP08603 1231 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 UNGP13051 313 aaPredicted RBP8.22□□□□□ -1.09
CDH1-208ENST00000565810 CDH5P33151 784 aaPredicted RBP8.22□□□□□ -1.09
CDH1-208ENST00000565810 MAGEA1P43355 309 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 PLA2G4AP47712 749 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 NRIP1P48552 1158 aa8.22□□□□□ -1.09
CDH1-208ENST00000565810 RGS7P49802 495 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms