RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 CATSPERGQ6ZRH7 1159 aa5.4□□□□□ -1.54
CHD9-212ENST00000564641 SLC15A3Q8IY34 581 aa5.4□□□□□ -1.54
CHD9-212ENST00000564641 C9orf106Q8NAJ2 232 aa5.4□□□□□ -1.54
CHD9-212ENST00000564641 GLG1Q92896 1179 aa5.4□□□□□ -1.54
CHD9-212ENST00000564641 DAZAP1Q96EP5 407 aaKnown RBP5.4□□□□□ -1.54
CHD9-212ENST00000564641 ASB2Q96Q27 587 aa5.4□□□□□ -1.54
CHD9-212ENST00000564641 CCNL1Q9UK58 526 aaPredicted RBP5.4□□□□□ -1.54
CHD9-212ENST00000564641 GABRQQ9UN88 632 aa5.4□□□□□ -1.54
CHD9-212ENST00000564641 TMX2Q9Y320 296 aa5.4□□□□□ -1.54
CHD9-212ENST00000564641 BAZ1BQ9UIG0 1483 aaKnown RBP5.39□□□□□ -1.55
CHD9-212ENST00000564641 ATAD2BQ9ULI0 1458 aa5.39□□□□□ -1.55
CHD9-212ENST00000564641 SMARCA4P51532 1647 aa5.39□□□□□ -1.55
CHD9-212ENST00000564641 ADAMTS3O15072 1205 aa5.39□□□□□ -1.55
CHD9-212ENST00000564641 MOSPD3O75425 235 aa5.39□□□□□ -1.55
CHD9-212ENST00000564641 BMP15O95972 392 aa5.39□□□□□ -1.55
CHD9-212ENST00000564641 CHRM5P08912 532 aaPredicted RBP5.39□□□□□ -1.55
CHD9-212ENST00000564641 GPSM2P81274 684 aa5.39□□□□□ -1.55
CHD9-212ENST00000564641 MGAT5BQ3V5L5 792 aa5.39□□□□□ -1.55
CHD9-212ENST00000564641 CERKLQ49MI3 558 aaPredicted RBP5.39□□□□□ -1.55
CHD9-212ENST00000564641 Q6ZWC4 215 aa5.39□□□□□ -1.55
CHD9-212ENST00000564641 GRAMD1CQ8IYS0 662 aa5.39□□□□□ -1.55
CHD9-212ENST00000564641 GALNT16Q8N428 558 aa5.39□□□□□ -1.55
CHD9-212ENST00000564641 XAGE5Q8WWM1 108 aa5.39□□□□□ -1.55
CHD9-212ENST00000564641 SOCS4Q8WXH5 440 aa5.39□□□□□ -1.55
CHD9-212ENST00000564641 CGRRF1Q99675 332 aa5.39□□□□□ -1.55
CHD9-212ENST00000564641 AASDHPPTQ9NRN7 309 aa5.39□□□□□ -1.55
CHD9-212ENST00000564641 TRMT13Q9NUP7 481 aaKnown RBP5.39□□□□□ -1.55
CHD9-212ENST00000564641 PNMA8BQ9ULN7 279 aaPredicted RBP5.39□□□□□ -1.55
CHD9-212ENST00000564641 KAT6AQ92794 2004 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 CYP2D7A0A087X1C5 515 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 A0A088AWK7 358 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 E2F8A0AVK6 867 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 POC1B-GALNT4F8VUJ3 575 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 ALDH2P05091 517 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 CT47B1P0C2W7 299 aaPredicted RBP5.38□□□□□ -1.55
CHD9-212ENST00000564641 PF4V1P10720 104 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 MPGP29372 298 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 PLCD1P51178 756 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 CYP4F2P78329 520 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 FGL2Q14314 439 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 PTPROQ16827 1216 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 CEP78Q5JTW2 689 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 NAPRTQ6XQN6 538 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 GALNT4Q8N4A0 578 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 CYP2W1Q8TAV3 490 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 OSCP1Q8WVF1 389 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 RSPRY1Q96DX4 576 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 MESP1Q9BRJ9 268 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 PRSS22Q9GZN4 317 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 TYW1Q9NV66 732 aaKnown RBP5.38□□□□□ -1.55
CHD9-212ENST00000564641 TUBA8Q9NY65 449 aaPredicted RBP5.38□□□□□ -1.55
CHD9-212ENST00000564641 TFCP2L1Q9NZI6 479 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 IP6K2Q9UHH9 426 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 NOP58Q9Y2X3 529 aaKnown RBP5.38□□□□□ -1.55
CHD9-212ENST00000564641 PAXBP1Q9Y5B6 917 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 LAMC3Q9Y6N6 1575 aa5.38□□□□□ -1.55
CHD9-212ENST00000564641 UBE2Q2LH0YL09 131 aa5.37□□□□□ -1.55
CHD9-212ENST00000564641 TP73O15350 636 aa5.37□□□□□ -1.55
CHD9-212ENST00000564641 NHLRC4P0CG21 123 aaPredicted RBP5.37□□□□□ -1.55
CHD9-212ENST00000564641 MMP13P45452 471 aa5.37□□□□□ -1.55
CHD9-212ENST00000564641 SLC11A2P49281 568 aa5.37□□□□□ -1.55
CHD9-212ENST00000564641 UCP3P55916 312 aa5.37□□□□□ -1.55
CHD9-212ENST00000564641 RAB1AP62820 205 aa5.37□□□□□ -1.55
CHD9-212ENST00000564641 MYO1EQ12965 1108 aa5.37□□□□□ -1.55
CHD9-212ENST00000564641 KLF9Q13886 244 aaPredicted RBP5.37□□□□□ -1.55
CHD9-212ENST00000564641 IFIT1BQ5T764 474 aaKnown RBP5.37□□□□□ -1.55
CHD9-212ENST00000564641 LMBRD2Q68DH5 695 aaPredicted RBP5.37□□□□□ -1.55
CHD9-212ENST00000564641 CHSY1Q86X52 802 aa5.37□□□□□ -1.55
CHD9-212ENST00000564641 PNLDC1Q8NA58 520 aaKnown RBP5.37□□□□□ -1.55
CHD9-212ENST00000564641 KBTBD7Q8WVZ9 684 aa5.37□□□□□ -1.55
CHD9-212ENST00000564641 R3HDM4Q96D70 268 aa5.37□□□□□ -1.55
CHD9-212ENST00000564641 SNX18Q96RF0 628 aa5.37□□□□□ -1.55
CHD9-212ENST00000564641 TMEM79Q9BSE2 394 aa5.37□□□□□ -1.55
CHD9-212ENST00000564641 ZSCAN32Q9NX65 697 aa5.37□□□□□ -1.55
CHD9-212ENST00000564641 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.37□□□□□ -1.55
CHD9-212ENST00000564641 ZNF521Q96K83 1311 aa5.37□□□□□ -1.55
CHD9-212ENST00000564641 PDS5BQ9NTI5 1447 aa5.37□□□□□ -1.55
CHD9-212ENST00000564641 H3BML4 177 aa5.36□□□□□ -1.55
CHD9-212ENST00000564641 USP1O94782 785 aa5.36□□□□□ -1.55
CHD9-212ENST00000564641 ABLIM3O94929 683 aa5.36□□□□□ -1.55
CHD9-212ENST00000564641 IGKV2-30P06310 120 aa5.36□□□□□ -1.55
CHD9-212ENST00000564641 DGKEP52429 567 aa5.36□□□□□ -1.55
CHD9-212ENST00000564641 SP2Q02086 613 aa5.36□□□□□ -1.55
CHD9-212ENST00000564641 KRT17Q04695 432 aa5.36□□□□□ -1.55
CHD9-212ENST00000564641 TRIP6Q15654 476 aaKnown RBP5.36□□□□□ -1.55
CHD9-212ENST00000564641 ETFDHQ16134 617 aa5.36□□□□□ -1.55
CHD9-212ENST00000564641 C4orf46Q504U0 113 aa5.36□□□□□ -1.55
CHD9-212ENST00000564641 TMEM63BQ5T3F8 832 aa5.36□□□□□ -1.55
CHD9-212ENST00000564641 KIRREL2Q6UWL6 708 aa5.36□□□□□ -1.55
CHD9-212ENST00000564641 ZNF783Q6ZMS7 281 aa5.36□□□□□ -1.55
CHD9-212ENST00000564641 BHLHA9Q7RTU4 235 aa5.36□□□□□ -1.55
CHD9-212ENST00000564641 GAS2L3Q86XJ1 694 aa5.36□□□□□ -1.55
CHD9-212ENST00000564641 DENND1CQ8IV53 801 aa5.36□□□□□ -1.55
CHD9-212ENST00000564641 C8orf58Q8NAV2 365 aa5.36□□□□□ -1.55
CHD9-212ENST00000564641 HOOK2Q96ED9 719 aa5.36□□□□□ -1.55
CHD9-212ENST00000564641 MRGPRX1Q96LB2 322 aa5.36□□□□□ -1.55
CHD9-212ENST00000564641 THAP7Q9BT49 309 aaPredicted RBP5.36□□□□□ -1.55
CHD9-212ENST00000564641 DPCDQ9BVM2 203 aaPredicted RBP5.36□□□□□ -1.55
CHD9-212ENST00000564641 QTRT1Q9BXR0 403 aaKnown RBP5.36□□□□□ -1.55
CHD9-212ENST00000564641 SLC12A5Q9H2X9 1139 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms