RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 RAB34Q9BZG1 259 aa7.9□□□□□ -1.14
VPS4A-203ENST00000564399 HAPLN2Q9GZV7 340 aa7.9□□□□□ -1.14
VPS4A-203ENST00000564399 TMEM206Q9H813 350 aa7.9□□□□□ -1.14
VPS4A-203ENST00000564399 UXTQ9UBK9 157 aaPredicted RBP7.9□□□□□ -1.14
VPS4A-203ENST00000564399 STK24Q9Y6E0 443 aa7.9□□□□□ -1.14
VPS4A-203ENST00000564399 PTPRBP23467 1997 aa7.9□□□□□ -1.15
VPS4A-203ENST00000564399 HELZP42694 1942 aaKnown RBP7.9□□□□□ -1.15
VPS4A-203ENST00000564399 MYMKA6NI61 221 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 H0YCG3 227 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 TULP1O00294 542 aaPredicted RBP7.89□□□□□ -1.15
VPS4A-203ENST00000564399 PIRO00625 290 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 HNRNPDLO14979 420 aaKnown RBP7.89□□□□□ -1.15
VPS4A-203ENST00000564399 OGTO15294 1046 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 AP5Z1O43299 807 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 JAK2O60674 1132 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 NFICP08651 508 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 SERPINF2P08697 491 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 HNRNPLP14866 589 aaKnown RBP eCLIP7.89□□□□□ -1.15
VPS4A-203ENST00000564399 HDCP19113 662 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 HOXD12P35452 270 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 TIE1P35590 1138 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 OPRD1P41143 372 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 TAF6P49848 677 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 FXR2P51116 673 aaKnown RBP eCLIP7.89□□□□□ -1.15
VPS4A-203ENST00000564399 RPL10AP62906 217 aaKnown RBP7.89□□□□□ -1.15
VPS4A-203ENST00000564399 MRPS21P82921 87 aaKnown RBP7.89□□□□□ -1.15
VPS4A-203ENST00000564399 TSPY1Q01534 308 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 RPL6Q02878 288 aaKnown RBP7.89□□□□□ -1.15
VPS4A-203ENST00000564399 USP4Q13107 963 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 GNL2Q13823 731 aaKnown RBP7.89□□□□□ -1.15
VPS4A-203ENST00000564399 PDIA5Q14554 519 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 KCNB1Q14721 858 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 TMEM132DQ14C87 1099 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 TRIP6Q15654 476 aaKnown RBP7.89□□□□□ -1.15
VPS4A-203ENST00000564399 NFE2Q16621 373 aaPredicted RBP7.89□□□□□ -1.15
VPS4A-203ENST00000564399 DDR2Q16832 855 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 ZC2HC1CQ53FD0 456 aaPredicted RBP7.89□□□□□ -1.15
VPS4A-203ENST00000564399 SPDYCQ5MJ68 293 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 RABEPKQ7Z6M1 372 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 CD302Q8IX05 232 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 PNPLA1Q8N8W4 532 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 NSUN7Q8NE18 718 aaKnown RBP7.89□□□□□ -1.15
VPS4A-203ENST00000564399 OR2I1PQ8NGU4 316 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 MDM1Q8TC05 714 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 BBC3Q96PG8 261 aaPredicted RBP7.89□□□□□ -1.15
VPS4A-203ENST00000564399 MSTO1Q9BUK6 570 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 TIPINQ9BVW5 301 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 PILRBQ9UKJ0 227 aa7.89□□□□□ -1.15
VPS4A-203ENST00000564399 ASH1LQ9NR48 2969 aaKnown RBP7.88□□□□□ -1.15
VPS4A-203ENST00000564399 TCRBV21S2A2A0A5A6 115 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 ANO9A1A5B4 782 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 C2orf78A6NCI8 922 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 PP2D1A8MPX8 630 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 SGK1O00141 431 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 ARHGAP33O14559 1287 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 SH3BP5O60239 455 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 TADA3O75528 432 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 APODP05090 189 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 SYPP08247 313 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 FTH1P19P0C7X4 201 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 CD59P13987 128 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 CYP2F1P24903 491 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 GUCY2CP25092 1073 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 CDC25AP30304 524 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 ZNF33AQ06730 810 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 ME3Q16798 604 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 MAP7D1Q3KQU3 841 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 EOGTQ5NDL2 527 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 EMC10Q5UCC4 262 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 KCNK18Q7Z418 384 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 SCN4BQ8IWT1 228 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 FSIP1Q8NA03 581 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 IL17RCQ8NAC3 791 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 GLIS3Q8NEA6 775 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 SPATA18Q8TC71 538 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 ADAMTS14Q8WXS8 1223 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 GTF3C6Q969F1 213 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 CAMK1GQ96NX5 476 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 PNKPQ96T60 521 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 CAPN10Q9HC96 672 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 ZDHHC4Q9NPG8 344 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 TMLHEQ9NVH6 421 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 DPP3Q9NY33 737 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 LARSQ9P2J5 1176 aaKnown RBP7.88□□□□□ -1.15
VPS4A-203ENST00000564399 NOL7Q9UMY1 257 aaKnown RBP7.88□□□□□ -1.15
VPS4A-203ENST00000564399 APOBEC2Q9Y235 224 aaKnown RBP7.88□□□□□ -1.15
VPS4A-203ENST00000564399 RAXQ9Y2V3 346 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 PCDH15Q96QU1 1955 aa7.88□□□□□ -1.15
VPS4A-203ENST00000564399 KPNA7A9QM74 516 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 ZBTB24O43167 697 aaPredicted RBP7.87□□□□□ -1.15
VPS4A-203ENST00000564399 NOL4O94818 638 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 KAT7O95251 611 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 CYP17A1P05093 508 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 ADRB2P07550 413 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 SLC6A11P48066 632 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 PDE6CP51160 858 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 KDSRQ06136 332 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 NBR1Q14596 966 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 SV2CQ496J9 727 aa7.87□□□□□ -1.15
VPS4A-203ENST00000564399 HSF5Q4G112 596 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms