RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 MAN2B1O00754 1011 aa21.3■■□□□ 1
SHCBP1-203ENST00000564272 TRIM49P0CI25 452 aa21.3■■□□□ 1
SHCBP1-203ENST00000564272 TRIM49CP0CI26 452 aa21.3■■□□□ 1
SHCBP1-203ENST00000564272 DDX6P26196 483 aaKnown RBP eCLIP21.3■■□□□ 1
SHCBP1-203ENST00000564272 AVPR1AP37288 418 aa21.3■■□□□ 1
SHCBP1-203ENST00000564272 SOX9P48436 509 aa21.3■■□□□ 1
SHCBP1-203ENST00000564272 VAMP7P51809 220 aa21.3■■□□□ 1
SHCBP1-203ENST00000564272 FAM160A1Q05DH4 1040 aa21.3■■□□□ 1
SHCBP1-203ENST00000564272 SV2AQ7L0J3 742 aa21.3■■□□□ 1
SHCBP1-203ENST00000564272 CELF5Q8N6W0 485 aaKnown RBP21.3■■□□□ 1
SHCBP1-203ENST00000564272 B3GALNT2Q8NCR0 500 aa21.3■■□□□ 1
SHCBP1-203ENST00000564272 FAM3CQ92520 227 aa21.3■■□□□ 1
SHCBP1-203ENST00000564272 USP13Q92995 863 aaPredicted RBP21.3■■□□□ 1
SHCBP1-203ENST00000564272 CLDN23Q96B33 292 aa21.3■■□□□ 1
SHCBP1-203ENST00000564272 ZNF518BQ9C0D4 1074 aa21.3■■□□□ 1
SHCBP1-203ENST00000564272 TRPC7Q9HCX4 862 aa21.3■■□□□ 1
SHCBP1-203ENST00000564272 SPATA6Q9NWH7 488 aaPredicted RBP21.3■■□□□ 1
SHCBP1-203ENST00000564272 ZMYM5Q9UJ78 669 aa21.3■■□□□ 1
SHCBP1-203ENST00000564272 ZNF638Q14966 1978 aaKnown RBP21.3■■□□□ 1
SHCBP1-203ENST00000564272 CACNA1IQ9P0X4 2223 aa21.29■■□□□ 1
SHCBP1-203ENST00000564272 PROB1E7EW31 1015 aa21.29■■□□□ 1
SHCBP1-203ENST00000564272 MAPK13O15264 365 aa21.29■■□□□ 1
SHCBP1-203ENST00000564272 PIK3CAP42336 1068 aa21.29■■□□□ 1
SHCBP1-203ENST00000564272 CACNA2D1P54289 1103 aa21.29■■□□□ 1
SHCBP1-203ENST00000564272 USP46P62068 366 aa21.29■■□□□ 1
SHCBP1-203ENST00000564272 FZD5Q13467 585 aa21.29■■□□□ 1
SHCBP1-203ENST00000564272 ARHGAP29Q52LW3 1261 aa21.29■■□□□ 1
SHCBP1-203ENST00000564272 SPOPLQ6IQ16 392 aa21.29■■□□□ 1
SHCBP1-203ENST00000564272 MON1AQ86VX9 555 aa21.29■■□□□ 1
SHCBP1-203ENST00000564272 FAM186BQ8IYM0 893 aa21.29■■□□□ 1
SHCBP1-203ENST00000564272 ZNF687Q8N1G0 1237 aa21.29■■□□□ 1
SHCBP1-203ENST00000564272 RIN3Q8TB24 985 aa21.29■■□□□ 1
SHCBP1-203ENST00000564272 SPATA17Q96L03 361 aa21.29■■□□□ 1
SHCBP1-203ENST00000564272 NELL2Q99435 816 aa21.29■■□□□ 1
SHCBP1-203ENST00000564272 B3GNT5Q9BYG0 378 aa21.29■■□□□ 1
SHCBP1-203ENST00000564272 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.29■■□□□ 1
SHCBP1-203ENST00000564272 TMEM30AQ9NV96 361 aa21.29■■□□□ 1
SHCBP1-203ENST00000564272 F8VP50 259 aa21.28■■□□□ 1
SHCBP1-203ENST00000564272 CLDN5O00501 218 aa21.28■■□□□ 1
SHCBP1-203ENST00000564272 IKBKBO14920 756 aa21.28■■□□□ 1
SHCBP1-203ENST00000564272 TRIM66O15016 1216 aa21.28■■□□□ 1
SHCBP1-203ENST00000564272 GFRA3O60609 400 aa21.28■■□□□ 1
SHCBP1-203ENST00000564272 HLA-DRAP01903 254 aa21.28■■□□□ 1
SHCBP1-203ENST00000564272 CCNE1P24864 410 aa21.28■■□□□ 1
SHCBP1-203ENST00000564272 RPL13P26373 211 aaKnown RBP21.28■■□□□ 1
SHCBP1-203ENST00000564272 ANXA13P27216 316 aa21.28■■□□□ 1
SHCBP1-203ENST00000564272 KPNA1P52294 538 aaPredicted RBP21.28■■□□□ 1
SHCBP1-203ENST00000564272 TNK2Q07912 1038 aa21.28■■□□□ 1
SHCBP1-203ENST00000564272 ADAM9Q13443 819 aa21.28■■□□□ 1
SHCBP1-203ENST00000564272 INTS8Q75QN2 995 aaKnown RBP21.28■■□□□ 1
SHCBP1-203ENST00000564272 MAML2Q8IZL2 1156 aaPredicted RBP21.28■■□□□ 1
SHCBP1-203ENST00000564272 EEF2KMTQ96G04 330 aa21.28■■□□□ 1
SHCBP1-203ENST00000564272 SLC22A12Q96S37 553 aa21.28■■□□□ 1
SHCBP1-203ENST00000564272 MMRN2Q9H8L6 949 aa21.28■■□□□ 1
SHCBP1-203ENST00000564272 RMND1Q9NWS8 449 aa21.28■■□□□ 1
SHCBP1-203ENST00000564272 GTSE1Q9NYZ3 720 aa21.28■■□□□ 1
SHCBP1-203ENST00000564272 ANAPC1Q9H1A4 1944 aa21.27■■□□□ 1
SHCBP1-203ENST00000564272 NCAM2O15394 837 aa21.27■■□□□ 1
SHCBP1-203ENST00000564272 ASS1P00966 412 aaKnown RBP21.27■■□□□ 1
SHCBP1-203ENST00000564272 KRT13P13646 458 aa21.27■■□□□ 1
SHCBP1-203ENST00000564272 PSMC2P35998 433 aaKnown RBP21.27■■□□□ 1
SHCBP1-203ENST00000564272 MAGEA9P43362 315 aa21.27■■□□□ 1
SHCBP1-203ENST00000564272 GCLMP48507 274 aa21.27■■□□□ 1
SHCBP1-203ENST00000564272 PPP3CAQ08209 521 aa21.27■■□□□ 1
SHCBP1-203ENST00000564272 SGSM1Q2NKQ1 1148 aa21.27■■□□□ 1
SHCBP1-203ENST00000564272 EDRF1Q3B7T1 1238 aa21.27■■□□□ 1
SHCBP1-203ENST00000564272 DENND5BQ6ZUT9 1274 aa21.27■■□□□ 1
SHCBP1-203ENST00000564272 ASCL5Q7RTU5 278 aa21.27■■□□□ 1
SHCBP1-203ENST00000564272 ELOVL4Q9GZR5 314 aa21.27■■□□□ 1
SHCBP1-203ENST00000564272 TDP1Q9NUW8 608 aa21.27■■□□□ 1
SHCBP1-203ENST00000564272 HMGXB4Q9UGU5 601 aa21.27■■□□□ 1
SHCBP1-203ENST00000564272 R4GN57 208 aa21.27■■□□□ 1
SHCBP1-203ENST00000564272 ZFHX2Q9C0A1 2572 aaPredicted RBP21.27■□□□□ 0.99
SHCBP1-203ENST00000564272 C2orf78A6NCI8 922 aa21.26■□□□□ 0.99
SHCBP1-203ENST00000564272 SOBPA7XYQ1 873 aa21.26■□□□□ 0.99
SHCBP1-203ENST00000564272 SPECC1L-ADORA2AF8WAN1 911 aa21.26■□□□□ 0.99
SHCBP1-203ENST00000564272 SP9P0CG40 484 aa21.26■□□□□ 0.99
SHCBP1-203ENST00000564272 P4HA1P13674 534 aa21.26■□□□□ 0.99
SHCBP1-203ENST00000564272 PRCPP42785 496 aa21.26■□□□□ 0.99
SHCBP1-203ENST00000564272 ASPAP45381 313 aa21.26■□□□□ 0.99
SHCBP1-203ENST00000564272 RPS9P46781 194 aaKnown RBP21.26■□□□□ 0.99
SHCBP1-203ENST00000564272 PLCB2Q00722 1185 aa21.26■□□□□ 0.99
SHCBP1-203ENST00000564272 ORC1Q13415 861 aa21.26■□□□□ 0.99
SHCBP1-203ENST00000564272 ZNF658Q5TYW1 1059 aaPredicted RBP21.26■□□□□ 0.99
SHCBP1-203ENST00000564272 TXNDC11Q6PKC3 985 aa21.26■□□□□ 0.99
SHCBP1-203ENST00000564272 TAS1R2Q8TE23 839 aa21.26■□□□□ 0.99
SHCBP1-203ENST00000564272 TAF4BQ92750 862 aa21.26■□□□□ 0.99
SHCBP1-203ENST00000564272 C8orf48Q96LL4 319 aa21.26■□□□□ 0.99
SHCBP1-203ENST00000564272 GSDMAQ96QA5 445 aa21.26■□□□□ 0.99
SHCBP1-203ENST00000564272 CYP2S1Q96SQ9 504 aa21.26■□□□□ 0.99
SHCBP1-203ENST00000564272 KIF9Q9HAQ2 790 aa21.26■□□□□ 0.99
SHCBP1-203ENST00000564272 THG1LQ9NWX6 298 aaKnown RBP21.26■□□□□ 0.99
SHCBP1-203ENST00000564272 PCDHA5Q9Y5H7 936 aa21.26■□□□□ 0.99
SHCBP1-203ENST00000564272 TRAV19A0A0A6YYK7 116 aa21.25■□□□□ 0.99
SHCBP1-203ENST00000564272 PRR23AA6NEV1 266 aa21.25■□□□□ 0.99
SHCBP1-203ENST00000564272 LAMTOR5O43504 91 aa21.25■□□□□ 0.99
SHCBP1-203ENST00000564272 SMC2O95347 1197 aa21.25■□□□□ 0.99
SHCBP1-203ENST00000564272 CKMP06732 381 aa21.25■□□□□ 0.99
SHCBP1-203ENST00000564272 CTHP32929 405 aa21.25■□□□□ 0.99
SHCBP1-203ENST00000564272 TRIM68Q6AZZ1 485 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms