RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 CDC25CP30307 473 aa17.71■□□□□ 0.43
RNF40-206ENST00000564260 GRIK1P39086 918 aa17.71■□□□□ 0.43
RNF40-206ENST00000564260 ZNF132P52740 706 aa17.71■□□□□ 0.43
RNF40-206ENST00000564260 LRMPQ12912 555 aa17.71■□□□□ 0.43
RNF40-206ENST00000564260 TDRD5Q8NAT2 981 aaKnown RBP17.71■□□□□ 0.43
RNF40-206ENST00000564260 SHC3Q92529 594 aa17.71■□□□□ 0.43
RNF40-206ENST00000564260 HEXIM2Q96MH2 286 aaKnown RBP17.71■□□□□ 0.43
RNF40-206ENST00000564260 TWNKQ96RR1 684 aa17.71■□□□□ 0.43
RNF40-206ENST00000564260 APOL5Q9BWW9 433 aa17.71■□□□□ 0.43
RNF40-206ENST00000564260 VPS16Q9H269 839 aa17.71■□□□□ 0.43
RNF40-206ENST00000564260 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.71■□□□□ 0.43
RNF40-206ENST00000564260 EPS15L1Q9UBC2 864 aa17.71■□□□□ 0.43
RNF40-206ENST00000564260 HMGXB4Q9UGU5 601 aa17.71■□□□□ 0.43
RNF40-206ENST00000564260 RTN3O95197 1032 aaPredicted RBP17.7■□□□□ 0.42
RNF40-206ENST00000564260 PFKLP17858 780 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 DDX6P26196 483 aaKnown RBP eCLIP17.7■□□□□ 0.42
RNF40-206ENST00000564260 WEE1P30291 646 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 SGO2Q562F6 1265 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 PRSS36Q5K4E3 855 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 KLHDC7AQ5VTJ3 777 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 TMEM270Q6UE05 265 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 DENND5BQ6ZUT9 1274 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 PAQR9Q6ZVX9 377 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 RRAGAQ7L523 313 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 TMC8Q8IU68 726 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 ARHGEF19Q8IW93 802 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 TTC9BQ8N6N2 239 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 SLC2A14Q8TDB8 520 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 OVCA2Q8WZ82 227 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 ELMO3Q96BJ8 720 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 KREMEN1Q96MU8 473 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 GCNAQ96QF7 691 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 CORO1BQ9BR76 489 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 MED10Q9BTT4 135 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 TTLL2Q9BWV7 592 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 LRRC3Q9BY71 257 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 ZNF518BQ9C0D4 1074 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 SIX2Q9NPC8 291 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 MRPS23Q9Y3D9 190 aaKnown RBP17.7■□□□□ 0.42
RNF40-206ENST00000564260 PCDHB4Q9Y5E5 795 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 NCANO14594 1321 aa17.7■□□□□ 0.42
RNF40-206ENST00000564260 A0A1B0GTH6 734 aa17.69■□□□□ 0.42
RNF40-206ENST00000564260 A0A1W2PQC6 194 aa17.69■□□□□ 0.42
RNF40-206ENST00000564260 MED7O43513 233 aa17.69■□□□□ 0.42
RNF40-206ENST00000564260 ATP1A3P13637 1013 aa17.69■□□□□ 0.42
RNF40-206ENST00000564260 UCHL3P15374 230 aa17.69■□□□□ 0.42
RNF40-206ENST00000564260 NPR3P17342 541 aa17.69■□□□□ 0.42
RNF40-206ENST00000564260 BPIFB4P59827 614 aa17.69■□□□□ 0.42
RNF40-206ENST00000564260 UBXN1Q04323 297 aa17.69■□□□□ 0.42
RNF40-206ENST00000564260 KCNMA1Q12791 1236 aa17.69■□□□□ 0.42
RNF40-206ENST00000564260 C12orf29Q8N999 325 aa17.69■□□□□ 0.42
RNF40-206ENST00000564260 ANKRD52Q8NB46 1076 aa17.69■□□□□ 0.42
RNF40-206ENST00000564260 RBBP8NLQ8NC74 664 aaPredicted RBP17.69■□□□□ 0.42
RNF40-206ENST00000564260 IQCDQ96DY2 449 aa17.69■□□□□ 0.42
RNF40-206ENST00000564260 DUSP16Q9BY84 665 aa17.69■□□□□ 0.42
RNF40-206ENST00000564260 FBXO44Q9H4M3 255 aa17.69■□□□□ 0.42
RNF40-206ENST00000564260 RTN4Q9NQC3 1192 aaKnown RBP17.69■□□□□ 0.42
RNF40-206ENST00000564260 KRT82Q9NSB4 513 aa17.69■□□□□ 0.42
RNF40-206ENST00000564260 HESX1Q9UBX0 185 aa17.69■□□□□ 0.42
RNF40-206ENST00000564260 CDH7Q9ULB5 785 aa17.69■□□□□ 0.42
RNF40-206ENST00000564260 F8VP50 259 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 AP1G2O75843 785 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 TPM3P06753 285 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 SETSIPP0DME0 302 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 HMGA1P17096 107 aaKnown RBP17.68■□□□□ 0.42
RNF40-206ENST00000564260 PDE6CP51160 858 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 BCAT1P54687 386 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 CNGA2Q16280 664 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 ZNF394Q53GI3 561 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 ARHGAP15Q53QZ3 475 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 DPY19L2P1Q6NXN4 242 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 LCLAT1Q6UWP7 414 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 MTSS1LQ765P7 747 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 DENND4AQ7Z401 1863 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 LUZP1Q86V48 1076 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 SCN4BQ8IWT1 228 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 NUP93Q8N1F7 819 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 PDZD8Q8NEN9 1154 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 ADAMTS19Q8TE59 1207 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 NAA15Q9BXJ9 866 aaKnown RBP17.68■□□□□ 0.42
RNF40-206ENST00000564260 STK33Q9BYT3 514 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 IL37Q9NZH6 218 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 DNAJC12Q9UKB3 198 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 SIK3Q9Y2K2 1263 aa17.68■□□□□ 0.42
RNF40-206ENST00000564260 FAM92AA1XBS5 289 aa17.67■□□□□ 0.42
RNF40-206ENST00000564260 SLC38A8A6NNN8 435 aa17.67■□□□□ 0.42
RNF40-206ENST00000564260 O00370 1275 aa17.67■□□□□ 0.42
RNF40-206ENST00000564260 SERPINC1P01008 464 aa17.67■□□□□ 0.42
RNF40-206ENST00000564260 CCDC130P13994 396 aa17.67■□□□□ 0.42
RNF40-206ENST00000564260 DDR2Q16832 855 aa17.67■□□□□ 0.42
RNF40-206ENST00000564260 PPP1R26Q5T8A7 1209 aaPredicted RBP17.67■□□□□ 0.42
RNF40-206ENST00000564260 KAT5Q92993 513 aa17.67■□□□□ 0.42
RNF40-206ENST00000564260 E2F7Q96AV8 911 aa17.67■□□□□ 0.42
RNF40-206ENST00000564260 SLITRK1Q96PX8 696 aa17.67■□□□□ 0.42
RNF40-206ENST00000564260 UHRF1Q96T88 793 aaPredicted RBP17.67■□□□□ 0.42
RNF40-206ENST00000564260 LPIN3Q9BQK8 851 aa17.67■□□□□ 0.42
RNF40-206ENST00000564260 LSM14BQ9BX40 385 aaKnown RBP17.67■□□□□ 0.42
RNF40-206ENST00000564260 FAM49BQ9NUQ9 324 aa17.67■□□□□ 0.42
RNF40-206ENST00000564260 HCFC1R1Q9NWW0 138 aa17.67■□□□□ 0.42
RNF40-206ENST00000564260 IGSF9Q9P2J2 1179 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms