RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 DZANK1Q9NVP4 752 aa17.98■□□□□ 0.47
CMTM3-208ENST00000564247 C2CD2LO14523 706 aa17.97■□□□□ 0.47
CMTM3-208ENST00000564247 ARHGAP6O43182 974 aa17.97■□□□□ 0.47
CMTM3-208ENST00000564247 IPO7O95373 1038 aaKnown RBP17.97■□□□□ 0.47
CMTM3-208ENST00000564247 EPCAMP16422 314 aa17.97■□□□□ 0.47
CMTM3-208ENST00000564247 BRD2P25440 801 aaKnown RBP17.97■□□□□ 0.47
CMTM3-208ENST00000564247 KLRC2P26717 231 aa17.97■□□□□ 0.47
CMTM3-208ENST00000564247 CLCN4P51793 760 aa17.97■□□□□ 0.47
CMTM3-208ENST00000564247 HS1BP3Q53T59 392 aa17.97■□□□□ 0.47
CMTM3-208ENST00000564247 TAF3Q5VWG9 929 aa17.97■□□□□ 0.47
CMTM3-208ENST00000564247 RIN2Q8WYP3 895 aaPredicted RBP17.97■□□□□ 0.47
CMTM3-208ENST00000564247 CYFIP2Q96F07 1278 aa17.97■□□□□ 0.47
CMTM3-208ENST00000564247 B3GALT6Q96L58 329 aa17.97■□□□□ 0.47
CMTM3-208ENST00000564247 DPEP3Q9H4B8 488 aa17.97■□□□□ 0.47
CMTM3-208ENST00000564247 NOCTQ9UK39 431 aaKnown RBP17.97■□□□□ 0.47
CMTM3-208ENST00000564247 CEP83Q9Y592 693 aa17.97■□□□□ 0.47
CMTM3-208ENST00000564247 NME7Q9Y5B8 376 aa17.97■□□□□ 0.47
CMTM3-208ENST00000564247 EPN1Q9Y6I3 576 aaPredicted RBP17.97■□□□□ 0.47
CMTM3-208ENST00000564247 HCRTO43612 131 aa17.96■□□□□ 0.47
CMTM3-208ENST00000564247 ADH1AP07327 375 aa17.96■□□□□ 0.47
CMTM3-208ENST00000564247 PLEKP08567 350 aaPredicted RBP17.96■□□□□ 0.47
CMTM3-208ENST00000564247 PSMC1P62191 440 aaKnown RBP17.96■□□□□ 0.47
CMTM3-208ENST00000564247 ITIH3Q06033 890 aa17.96■□□□□ 0.47
CMTM3-208ENST00000564247 CBX2Q14781 532 aaPredicted RBP17.96■□□□□ 0.47
CMTM3-208ENST00000564247 MDH1BQ5I0G3 518 aa17.96■□□□□ 0.47
CMTM3-208ENST00000564247 INTS6LQ5JSJ4 861 aaKnown RBP17.96■□□□□ 0.47
CMTM3-208ENST00000564247 RTP2Q5QGT7 225 aa17.96■□□□□ 0.47
CMTM3-208ENST00000564247 ARHGAP17Q68EM7 881 aa17.96■□□□□ 0.47
CMTM3-208ENST00000564247 TRIM72Q6ZMU5 477 aa17.96■□□□□ 0.47
CMTM3-208ENST00000564247 TMEM139Q8IV31 216 aa17.96■□□□□ 0.47
CMTM3-208ENST00000564247 C12orf29Q8N999 325 aa17.96■□□□□ 0.47
CMTM3-208ENST00000564247 MYCBPAPQ8TBZ2 947 aa17.96■□□□□ 0.47
CMTM3-208ENST00000564247 SLC20A1Q8WUM9 679 aa17.96■□□□□ 0.47
CMTM3-208ENST00000564247 PIK3R5Q8WYR1 880 aa17.96■□□□□ 0.47
CMTM3-208ENST00000564247 DDX1Q92499 740 aaKnown RBP17.96■□□□□ 0.47
CMTM3-208ENST00000564247 RTP3Q9BQQ7 232 aa17.96■□□□□ 0.47
CMTM3-208ENST00000564247 MED10Q9BTT4 135 aa17.96■□□□□ 0.47
CMTM3-208ENST00000564247 ADAM7Q9H2U9 754 aa17.96■□□□□ 0.47
CMTM3-208ENST00000564247 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.96■□□□□ 0.47
CMTM3-208ENST00000564247 HESX1Q9UBX0 185 aa17.96■□□□□ 0.47
CMTM3-208ENST00000564247 ADAMTS1Q9UHI8 967 aa17.96■□□□□ 0.47
CMTM3-208ENST00000564247 BACE2Q9Y5Z0 518 aa17.96■□□□□ 0.47
CMTM3-208ENST00000564247 ATP8B3O60423 1300 aa17.96■□□□□ 0.46
CMTM3-208ENST00000564247 PLXNA3P51805 1871 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 SOWAHDA6NJG2 315 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 TEX28O15482 410 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 ATP2C2O75185 946 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 C1RP00736 705 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 CALCAP01258 141 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 MMEP08473 750 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 CHRNB2P17787 502 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 CCZ1BP86790 482 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 CCZ1P86791 482 aaPredicted RBP17.95■□□□□ 0.46
CMTM3-208ENST00000564247 CREMQ03060 361 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 SPA17Q15506 151 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 PSMD5Q16401 504 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 CES5AQ6NT32 575 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 FAM171BQ6P995 826 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 LCLAT1Q6UWP7 414 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 C4orf50Q6ZRC1 276 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 GLYCTKQ8IVS8 523 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 LNX1Q8TBB1 728 aaPredicted RBP17.95■□□□□ 0.46
CMTM3-208ENST00000564247 TFAP2BQ92481 460 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 PHF7Q9BWX1 381 aaPredicted RBP17.95■□□□□ 0.46
CMTM3-208ENST00000564247 ZCWPW1Q9H0M4 648 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 LUC7LQ9NQ29 371 aaKnown RBP17.95■□□□□ 0.46
CMTM3-208ENST00000564247 FAM49BQ9NUQ9 324 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 FNIP2Q9P278 1114 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 GTF3C4Q9UKN8 822 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 PCDHGC3Q9UN70 934 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 VWA8A3KMH1 1905 aa17.95■□□□□ 0.46
CMTM3-208ENST00000564247 MTCL1Q9Y4B5 1905 aaKnown RBP17.95■□□□□ 0.46
CMTM3-208ENST00000564247 MYBPHLA2RUH7 354 aa17.94■□□□□ 0.46
CMTM3-208ENST00000564247 O00370 1275 aa17.94■□□□□ 0.46
CMTM3-208ENST00000564247 NDUFA10O95299 355 aa17.94■□□□□ 0.46
CMTM3-208ENST00000564247 KIF11P52732 1056 aa17.94■□□□□ 0.46
CMTM3-208ENST00000564247 SLC8A3P57103 927 aa17.94■□□□□ 0.46
CMTM3-208ENST00000564247 FMO1Q01740 532 aa17.94■□□□□ 0.46
CMTM3-208ENST00000564247 CYP27A1Q02318 531 aa17.94■□□□□ 0.46
CMTM3-208ENST00000564247 SMARCB1Q12824 385 aa17.94■□□□□ 0.46
CMTM3-208ENST00000564247 SLC18A3Q16572 532 aa17.94■□□□□ 0.46
CMTM3-208ENST00000564247 NFE2Q16621 373 aaPredicted RBP17.94■□□□□ 0.46
CMTM3-208ENST00000564247 PPP1R26Q5T8A7 1209 aaPredicted RBP17.94■□□□□ 0.46
CMTM3-208ENST00000564247 PPP1R2P3Q6NXS1 205 aa17.94■□□□□ 0.46
CMTM3-208ENST00000564247 PRSS55Q6UWB4 352 aaPredicted RBP17.94■□□□□ 0.46
CMTM3-208ENST00000564247 OR10T2Q8NGX3 314 aa17.94■□□□□ 0.46
CMTM3-208ENST00000564247 KHSRPQ92945 711 aaKnown RBP eCLIP17.94■□□□□ 0.46
CMTM3-208ENST00000564247 HNRNPABQ99729 332 aaKnown RBP17.94■□□□□ 0.46
CMTM3-208ENST00000564247 APOL5Q9BWW9 433 aa17.94■□□□□ 0.46
CMTM3-208ENST00000564247 CRTAC1Q9NQ79 661 aa17.94■□□□□ 0.46
CMTM3-208ENST00000564247 MTRRQ9UBK8 725 aa17.94■□□□□ 0.46
CMTM3-208ENST00000564247 EIF3CLB5ME19 914 aaKnown RBP17.93■□□□□ 0.46
CMTM3-208ENST00000564247 LOC730098B7Z3J9 87 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 PI4K2BG5E9Z4 385 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 MICAL2O94851 1124 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 CPB1P15086 417 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 ARPP19P56211 112 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 KRT83P78385 493 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 GOLGA7BQ2TAP0 167 aa17.93■□□□□ 0.46
CMTM3-208ENST00000564247 ASTE1Q2TB18 679 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms