RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 PSMD5Q16401 504 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 NFE2Q16621 373 aaPredicted RBP13.67□□□□□ -0.22
SPG7-209ENST00000564047 CLEC16AQ2KHT3 1053 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 GOLGA7BQ2TAP0 167 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 PKDCCQ504Y2 493 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 CCDC122Q5T0U0 273 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 C10orf76Q5T2E6 689 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 SLC8B1Q6J4K2 584 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 DENND1BQ6P3S1 775 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 ALKBH5Q6P6C2 394 aaKnown RBP13.67□□□□□ -0.22
SPG7-209ENST00000564047 PRSS55Q6UWB4 352 aaPredicted RBP13.67□□□□□ -0.22
SPG7-209ENST00000564047 C4orf50Q6ZRC1 276 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 ALYREFQ86V81 257 aaKnown RBP13.67□□□□□ -0.22
SPG7-209ENST00000564047 LRRTM3Q86VH5 581 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 PALB2Q86YC2 1186 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 FUKQ8N0W3 1084 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 ANKRD52Q8NB46 1076 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 TMEM35BQ8NCS4 154 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 SLC2A14Q8TDB8 520 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 PCED1BQ96HM7 432 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 TMEM209Q96SK2 561 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 C11orf84Q9BUA3 381 aaPredicted RBP13.67□□□□□ -0.22
SPG7-209ENST00000564047 B3GNT5Q9BYG0 378 aa13.67□□□□□ -0.22
SPG7-209ENST00000564047 LUC7LQ9NQ29 371 aaKnown RBP13.67□□□□□ -0.22
SPG7-209ENST00000564047 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.67□□□□□ -0.22
SPG7-209ENST00000564047 MRPL17Q9NRX2 175 aaKnown RBP13.67□□□□□ -0.22
SPG7-209ENST00000564047 ATP8B3O60423 1300 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 M0QYV0 167 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 KIF2AO00139 706 aaPredicted RBP13.66□□□□□ -0.22
SPG7-209ENST00000564047 GPR37L1O60883 481 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 LILRB3O75022 631 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 RTN2O75298 545 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 TUBB4AP04350 444 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 SETSIPP0DME0 302 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 ADORA2BP29275 332 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 GPD2P43304 727 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 BCAT1P54687 386 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 NOMO3P69849 1222 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 CYP27A1Q02318 531 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 CENPCQ03188 943 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 GPR17Q13304 367 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 CCDC142Q17RM4 750 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 PPP2R2DQ66LE6 453 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 ACAD10Q6JQN1 1059 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 RSPO2Q6UXX9 243 aaPredicted RBP13.66□□□□□ -0.22
SPG7-209ENST00000564047 TOGARAM2Q6ZUX3 1019 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 PAQR9Q6ZVX9 377 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 FAM35AQ86V20 835 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 TTC30AQ86WT1 665 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 PASD1Q8IV76 773 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 FBXO22Q8NEZ5 403 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 SPPL3Q8TCT6 385 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 MYLPFQ96A32 169 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 FUBP3Q96I24 572 aaKnown RBP eCLIP13.66□□□□□ -0.22
SPG7-209ENST00000564047 MED10Q9BTT4 135 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 ISCUQ9H1K1 167 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 RXFP1Q9HBX9 757 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 TMLHEQ9NVH6 421 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 FNIP2Q9P278 1114 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 ADGRG1Q9Y653 693 aa13.66□□□□□ -0.22
SPG7-209ENST00000564047 KIAA1671Q9BY89 1806 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 C2CD2LO14523 706 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 CCP110O43303 1012 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 CCDC175P0C221 793 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 OR4Q2P0C623 313 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 FAM200BP0CF97 657 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 CPB1P15086 417 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 SSTR3P32745 418 aaPredicted RBP13.65□□□□□ -0.22
SPG7-209ENST00000564047 MAGEA1P43355 309 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 NSFP46459 744 aaKnown RBP13.65□□□□□ -0.22
SPG7-209ENST00000564047 SLC8A3P57103 927 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 BST2Q10589 180 aaKnown RBP13.65□□□□□ -0.22
SPG7-209ENST00000564047 PTPN14Q15678 1187 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 CFAP221Q4G0U5 840 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 SLC39A12Q504Y0 691 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 NAA35Q5VZE5 725 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 SPRED2Q7Z698 418 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 SPATA2LQ8IUW3 424 aaPredicted RBP13.65□□□□□ -0.22
SPG7-209ENST00000564047 WDTC1Q8N5D0 677 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 C1orf131Q8NDD1 294 aaKnown RBP13.65□□□□□ -0.22
SPG7-209ENST00000564047 ACRBPQ8NEB7 543 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 UBA3Q8TBC4 463 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 STK32AQ8WU08 396 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 C2orf15Q8WU43 125 aaKnown RBP13.65□□□□□ -0.22
SPG7-209ENST00000564047 POF1BQ8WVV4 589 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 SECISBP2LQ93073 1101 aaKnown RBP13.65□□□□□ -0.22
SPG7-209ENST00000564047 CLSTN3Q9BQT9 956 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 DESI2Q9BSY9 194 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 DUSP16Q9BY84 665 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 ALG13Q9NP73 1137 aaKnown RBP13.65□□□□□ -0.22
SPG7-209ENST00000564047 TAS2R14Q9NYV8 317 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 INTUQ9ULD6 942 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 COG5Q9UP83 839 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 REXO2Q9Y3B8 237 aaKnown RBP13.65□□□□□ -0.22
SPG7-209ENST00000564047 PCDHA13Q9Y5I0 950 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 IRAK3Q9Y616 596 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 CDY1Q9Y6F8 540 aa13.65□□□□□ -0.22
SPG7-209ENST00000564047 TMCO5BA8MYB1 307 aa13.64□□□□□ -0.23
SPG7-209ENST00000564047 H3BNC9 293 aa13.64□□□□□ -0.23
SPG7-209ENST00000564047 CLDN5O00501 218 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms